RNA–Protein interactions for RNA: ENST00000562200.5

COG4-209, Transcript of component of oligomeric golgi complex 4, humanhuman

TSL 2

Gene COG4, Length 885 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG4-209ENST00000562200 STRCQ7RTU9 1775 aa24.72■■□□□ 1.55
COG4-209ENST00000562200 SIGLEC1Q9BZZ2 1709 aa24.72■■□□□ 1.55
COG4-209ENST00000562200 PTPRTO14522 1441 aa24.71■■□□□ 1.55
COG4-209ENST00000562200 ATP10AO60312 1499 aa24.7■■□□□ 1.54
COG4-209ENST00000562200 NUP153P49790 1475 aaKnown RBP24.7■■□□□ 1.54
COG4-209ENST00000562200 ARHGEF12Q9NZN5 1544 aa24.69■■□□□ 1.54
COG4-209ENST00000562200 HECW1Q76N89 1606 aa24.68■■□□□ 1.54
COG4-209ENST00000562200 SCAPERQ9BY12 1400 aa24.68■■□□□ 1.54
COG4-209ENST00000562200 SETD1BQ9UPS6 1966 aaKnown RBP24.67■■□□□ 1.54
COG4-209ENST00000562200 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.65■■□□□ 1.54
COG4-209ENST00000562200 C9orf84Q5VXU9 1444 aa24.64■■□□□ 1.54
COG4-209ENST00000562200 RANGAP1P46060 587 aaPredicted RBP24.64■■□□□ 1.54
COG4-209ENST00000562200 IQSEC2Q5JU85 1478 aa24.63■■□□□ 1.53
COG4-209ENST00000562200 SAMD9Q5K651 1589 aa24.61■■□□□ 1.53
COG4-209ENST00000562200 ESF1Q9H501 851 aaKnown RBP24.6■■□□□ 1.53
COG4-209ENST00000562200 MYT1LQ9UL68 1186 aa24.6■■□□□ 1.53
COG4-209ENST00000562200 LTBP4Q8N2S1 1624 aa24.58■■□□□ 1.53
COG4-209ENST00000562200 UBAP1LF5GYI3 381 aa24.58■■□□□ 1.53
COG4-209ENST00000562200 EFCAB2Q5VUJ9 269 aa24.58■■□□□ 1.53
COG4-209ENST00000562200 PLCH2O75038 1416 aa24.56■■□□□ 1.52
COG4-209ENST00000562200 TRAPPC8Q9Y2L5 1435 aa24.49■■□□□ 1.51
COG4-209ENST00000562200 AFAP1Q8N556 730 aa24.48■■□□□ 1.51
COG4-209ENST00000562200 CSRNP3Q8WYN3 585 aa24.48■■□□□ 1.51
COG4-209ENST00000562200 NCOA1Q15788 1441 aa24.45■■□□□ 1.51
COG4-209ENST00000562200 ZNF335Q9H4Z2 1342 aaPredicted RBP24.42■■□□□ 1.5
COG4-209ENST00000562200 ZNF518AQ6AHZ1 1483 aa24.42■■□□□ 1.5
COG4-209ENST00000562200 NCKAP5LQ9HCH0 1330 aa24.4■■□□□ 1.5
COG4-209ENST00000562200 ATP1B4Q9UN42 357 aaPredicted RBP24.4■■□□□ 1.5
COG4-209ENST00000562200 C3P01024 1663 aa24.4■■□□□ 1.5
COG4-209ENST00000562200 CDK11AQ9UQ88 783 aaPredicted RBP24.39■■□□□ 1.49
COG4-209ENST00000562200 SCAF1Q9H7N4 1312 aaKnown RBP24.36■■□□□ 1.49
COG4-209ENST00000562200 CDK13Q14004 1512 aaKnown RBP24.35■■□□□ 1.49
COG4-209ENST00000562200 HSPA1LP34931 641 aa24.34■■□□□ 1.49
COG4-209ENST00000562200 CAMSAP1Q5T5Y3 1602 aa24.34■■□□□ 1.49
COG4-209ENST00000562200 PKD2Q13563 968 aa24.33■■□□□ 1.49
COG4-209ENST00000562200 CNTLNQ9NXG0 1405 aa24.33■■□□□ 1.49
COG4-209ENST00000562200 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
COG4-209ENST00000562200 PIP4K2BP78356 416 aa24.31■■□□□ 1.48
COG4-209ENST00000562200 MYO5CQ9NQX4 1742 aa24.31■■□□□ 1.48
COG4-209ENST00000562200 KDM5CP41229 1560 aa24.3■■□□□ 1.48
COG4-209ENST00000562200 REREQ9P2R6 1566 aa24.3■■□□□ 1.48
COG4-209ENST00000562200 DIP2CQ9Y2E4 1556 aa24.3■■□□□ 1.48
COG4-209ENST00000562200 AGLP35573 1532 aa24.3■■□□□ 1.48
COG4-209ENST00000562200 ARHGAP5Q13017 1502 aa24.29■■□□□ 1.48
COG4-209ENST00000562200 MLH3Q9UHC1 1453 aa24.28■■□□□ 1.48
COG4-209ENST00000562200 TOM1O60784 492 aa24.28■■□□□ 1.48
COG4-209ENST00000562200 NPATQ14207 1427 aa24.27■■□□□ 1.48
COG4-209ENST00000562200 MED1Q15648 1581 aaPredicted RBP24.26■■□□□ 1.47
COG4-209ENST00000562200 ZMYM3Q14202 1370 aa24.25■■□□□ 1.47
COG4-209ENST00000562200 PPP6R1Q9UPN7 881 aa24.24■■□□□ 1.47
COG4-209ENST00000562200 ABCA6Q8N139 1617 aa24.21■■□□□ 1.47
COG4-209ENST00000562200 PLA2R1Q13018 1463 aa24.18■■□□□ 1.46
COG4-209ENST00000562200 CLIP1P30622 1438 aa24.17■■□□□ 1.46
COG4-209ENST00000562200 KIF14Q15058 1648 aa24.17■■□□□ 1.46
COG4-209ENST00000562200 TROQ12816 1431 aaPredicted RBP24.16■■□□□ 1.46
COG4-209ENST00000562200 FMN1Q68DA7 1419 aa24.13■■□□□ 1.45
COG4-209ENST00000562200 TCOF1Q13428 1488 aaKnown RBP24.13■■□□□ 1.45
COG4-209ENST00000562200 MROH2AA6NES4 1674 aa24.1■■□□□ 1.45
COG4-209ENST00000562200 EEA1Q15075 1411 aa24.1■■□□□ 1.45
COG4-209ENST00000562200 SUPT6HQ7KZ85 1726 aaKnown RBP24.07■■□□□ 1.44
COG4-209ENST00000562200 CEP170BQ9Y4F5 1589 aaPredicted RBP24.05■■□□□ 1.44
COG4-209ENST00000562200 GGT6Q6P531 493 aa24.05■■□□□ 1.44
COG4-209ENST00000562200 KIDINS220Q9ULH0 1771 aa24.05■■□□□ 1.44
COG4-209ENST00000562200 CDC42BPBQ9Y5S2 1711 aa24.04■■□□□ 1.44
COG4-209ENST00000562200 PTPRKQ15262 1439 aa24.04■■□□□ 1.44
COG4-209ENST00000562200 ZNF777Q9ULD5 760 aaPredicted RBP24.04■■□□□ 1.44
COG4-209ENST00000562200 SPAG9O60271 1321 aaKnown RBP24.04■■□□□ 1.44
COG4-209ENST00000562200 CPS1P31327 1500 aa24.04■■□□□ 1.44
COG4-209ENST00000562200 ABCC1P33527 1531 aa24.04■■□□□ 1.44
COG4-209ENST00000562200 MYO3AQ8NEV4 1616 aa24.02■■□□□ 1.44
COG4-209ENST00000562200 SENP3Q9H4L4 574 aaPredicted RBP24.02■■□□□ 1.44
COG4-209ENST00000562200 ZNF142P52746 1687 aaPredicted RBP24.02■■□□□ 1.44
COG4-209ENST00000562200 SHANK2Q9UPX8 1470 aa24.01■■□□□ 1.43
COG4-209ENST00000562200 UBTFP17480 764 aaKnown RBP24.01■■□□□ 1.43
COG4-209ENST00000562200 ITSN2Q9NZM3 1697 aa23.99■■□□□ 1.43
COG4-209ENST00000562200 CLTCQ00610 1675 aaKnown RBP23.99■■□□□ 1.43
COG4-209ENST00000562200 A2ML1A8K2U0 1454 aa23.96■■□□□ 1.43
COG4-209ENST00000562200 HNRNPMP52272 730 aaKnown RBP eCLIP23.96■■□□□ 1.43
COG4-209ENST00000562200 EHMT2Q96KQ7 1210 aa23.96■■□□□ 1.43
COG4-209ENST00000562200 PREX2Q70Z35 1606 aa23.95■■□□□ 1.43
COG4-209ENST00000562200 ANKLE2Q86XL3 938 aa23.95■■□□□ 1.42
COG4-209ENST00000562200 SAMD9LQ8IVG5 1584 aa23.94■■□□□ 1.42
COG4-209ENST00000562200 A2MP01023 1474 aa23.9■■□□□ 1.42
COG4-209ENST00000562200 ARHGAP35Q9NRY4 1499 aa23.9■■□□□ 1.42
COG4-209ENST00000562200 RGS17Q9UGC6 210 aaPredicted RBP23.9■■□□□ 1.42
COG4-209ENST00000562200 DNMT1P26358 1616 aaKnown RBP23.9■■□□□ 1.42
COG4-209ENST00000562200 THEMISQ8N1K5 641 aaPredicted RBP23.88■■□□□ 1.41
COG4-209ENST00000562200 TNRQ92752 1358 aa23.84■■□□□ 1.41
COG4-209ENST00000562200 FBXO31Q5XUX0 539 aaPredicted RBP23.84■■□□□ 1.41
COG4-209ENST00000562200 ATP7AQ04656 1500 aa23.84■■□□□ 1.41
COG4-209ENST00000562200 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.83■■□□□ 1.41
COG4-209ENST00000562200 POLR1AO95602 1720 aaPredicted RBP23.82■■□□□ 1.4
COG4-209ENST00000562200 SYCP2Q9BX26 1530 aa23.82■■□□□ 1.4
COG4-209ENST00000562200 NEURL4Q96JN8 1562 aa23.82■■□□□ 1.4
COG4-209ENST00000562200 CFDP1Q9UEE9 299 aaPredicted RBP23.81■■□□□ 1.4
COG4-209ENST00000562200 PLXNC1O60486 1568 aa23.81■■□□□ 1.4
COG4-209ENST00000562200 CDC42BPAQ5VT25 1732 aa23.81■■□□□ 1.4
COG4-209ENST00000562200 ALKQ9UM73 1620 aa23.81■■□□□ 1.4
COG4-209ENST00000562200 VWDEQ8N2E2 1590 aa23.8■■□□□ 1.4
COG4-209ENST00000562200 LRRIQ1Q96JM4 1722 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms