RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 FER1L4A9Z1Z3 1794 aa33.86■■■■□ 3.01
PDXDC1-207ENST00000562119 PLCH2O75038 1416 aa33.86■■■■□ 3.01
PDXDC1-207ENST00000562119 EEA1Q15075 1411 aa33.86■■■■□ 3.01
PDXDC1-207ENST00000562119 ARHGEF12Q9NZN5 1544 aa33.82■■■■□ 3
PDXDC1-207ENST00000562119 ATP10AO60312 1499 aa33.8■■■■□ 3
PDXDC1-207ENST00000562119 CEBPAP49715 358 aaPredicted RBP33.76■■■□□ 2.99
PDXDC1-207ENST00000562119 C9orf84Q5VXU9 1444 aa33.76■■■□□ 2.99
PDXDC1-207ENST00000562119 PREX1Q8TCU6 1659 aa33.71■■■□□ 2.99
PDXDC1-207ENST00000562119 EFCAB2Q5VUJ9 269 aa33.71■■■□□ 2.99
PDXDC1-207ENST00000562119 ATP1B4Q9UN42 357 aaPredicted RBP33.64■■■□□ 2.98
PDXDC1-207ENST00000562119 MYO5CQ9NQX4 1742 aa33.64■■■□□ 2.98
PDXDC1-207ENST00000562119 STRCQ7RTU9 1775 aa33.62■■■□□ 2.97
PDXDC1-207ENST00000562119 AFAP1Q8N556 730 aa33.62■■■□□ 2.97
PDXDC1-207ENST00000562119 ZNF518AQ6AHZ1 1483 aa33.62■■■□□ 2.97
PDXDC1-207ENST00000562119 KIF14Q15058 1648 aa33.61■■■□□ 2.97
PDXDC1-207ENST00000562119 ILDR2Q71H61 639 aa33.6■■■□□ 2.97
PDXDC1-207ENST00000562119 DMRT2Q9Y5R5 561 aa33.6■■■□□ 2.97
PDXDC1-207ENST00000562119 UHRF1BP1Q6BDS2 1440 aa33.58■■■□□ 2.97
PDXDC1-207ENST00000562119 KDM5CP41229 1560 aa33.58■■■□□ 2.97
PDXDC1-207ENST00000562119 FMN1Q68DA7 1419 aa33.57■■■□□ 2.96
PDXDC1-207ENST00000562119 DISP3Q9P2K9 1392 aa33.57■■■□□ 2.96
PDXDC1-207ENST00000562119 CDK11AQ9UQ88 783 aaPredicted RBP33.55■■■□□ 2.96
PDXDC1-207ENST00000562119 ARHGAP5Q13017 1502 aa33.54■■■□□ 2.96
PDXDC1-207ENST00000562119 TROQ12816 1431 aaPredicted RBP33.53■■■□□ 2.96
PDXDC1-207ENST00000562119 DIP2CQ9Y2E4 1556 aa33.52■■■□□ 2.96
PDXDC1-207ENST00000562119 ARHGAP35Q9NRY4 1499 aa33.52■■■□□ 2.96
PDXDC1-207ENST00000562119 EHMT2Q96KQ7 1210 aa33.51■■■□□ 2.95
PDXDC1-207ENST00000562119 MYT1LQ9UL68 1186 aa33.48■■■□□ 2.95
PDXDC1-207ENST00000562119 REREQ9P2R6 1566 aa33.47■■■□□ 2.95
PDXDC1-207ENST00000562119 UBTFP17480 764 aaKnown RBP33.46■■■□□ 2.95
PDXDC1-207ENST00000562119 PTPRTO14522 1441 aa33.45■■■□□ 2.95
PDXDC1-207ENST00000562119 SETD1BQ9UPS6 1966 aaKnown RBP33.45■■■□□ 2.95
PDXDC1-207ENST00000562119 ABCA6Q8N139 1617 aa33.44■■■□□ 2.94
PDXDC1-207ENST00000562119 SOCS7O14512 581 aa33.44■■■□□ 2.94
PDXDC1-207ENST00000562119 MLH3Q9UHC1 1453 aa33.44■■■□□ 2.94
PDXDC1-207ENST00000562119 C3P01024 1663 aa33.43■■■□□ 2.94
PDXDC1-207ENST00000562119 CLIP1P30622 1438 aa33.43■■■□□ 2.94
PDXDC1-207ENST00000562119 TRAPPC8Q9Y2L5 1435 aa33.39■■■□□ 2.94
PDXDC1-207ENST00000562119 AGLP35573 1532 aa33.38■■■□□ 2.93
PDXDC1-207ENST00000562119 CDC42BPBQ9Y5S2 1711 aa33.38■■■□□ 2.93
PDXDC1-207ENST00000562119 LRRIQ1Q96JM4 1722 aa33.37■■■□□ 2.93
PDXDC1-207ENST00000562119 LTBP4Q8N2S1 1624 aa33.36■■■□□ 2.93
PDXDC1-207ENST00000562119 ESF1Q9H501 851 aaKnown RBP33.34■■■□□ 2.93
PDXDC1-207ENST00000562119 ABCC1P33527 1531 aa33.33■■■□□ 2.93
PDXDC1-207ENST00000562119 SPATA31D1Q6ZQQ2 1576 aa33.3■■■□□ 2.92
PDXDC1-207ENST00000562119 NCOA1Q15788 1441 aa33.3■■■□□ 2.92
PDXDC1-207ENST00000562119 PREX2Q70Z35 1606 aa33.3■■■□□ 2.92
PDXDC1-207ENST00000562119 ITSN2Q9NZM3 1697 aa33.26■■■□□ 2.92
PDXDC1-207ENST00000562119 KIDINS220Q9ULH0 1771 aa33.26■■■□□ 2.91
PDXDC1-207ENST00000562119 CNTLNQ9NXG0 1405 aa33.26■■■□□ 2.91
PDXDC1-207ENST00000562119 IQSEC2Q5JU85 1478 aa33.24■■■□□ 2.91
PDXDC1-207ENST00000562119 CAMSAP1Q5T5Y3 1602 aa33.18■■■□□ 2.9
PDXDC1-207ENST00000562119 NPATQ14207 1427 aa33.18■■■□□ 2.9
PDXDC1-207ENST00000562119 CASKIN1Q8WXD9 1431 aa33.17■■■□□ 2.9
PDXDC1-207ENST00000562119 CCDC18Q5T9S5 1454 aa33.17■■■□□ 2.9
PDXDC1-207ENST00000562119 ZMYM3Q14202 1370 aa33.15■■■□□ 2.9
PDXDC1-207ENST00000562119 SAMD9LQ8IVG5 1584 aa33.15■■■□□ 2.9
PDXDC1-207ENST00000562119 CDC42BPAQ5VT25 1732 aa33.14■■■□□ 2.89
PDXDC1-207ENST00000562119 NCKAP5LQ9HCH0 1330 aa33.12■■■□□ 2.89
PDXDC1-207ENST00000562119 MROH2AA6NES4 1674 aa33.11■■■□□ 2.89
PDXDC1-207ENST00000562119 ZNF777Q9ULD5 760 aaPredicted RBP33.1■■■□□ 2.89
PDXDC1-207ENST00000562119 ZNF335Q9H4Z2 1342 aaPredicted RBP33.09■■■□□ 2.89
PDXDC1-207ENST00000562119 SYCP2Q9BX26 1530 aa33.07■■■□□ 2.88
PDXDC1-207ENST00000562119 SPAG9O60271 1321 aaKnown RBP33.06■■■□□ 2.88
PDXDC1-207ENST00000562119 HNRNPMP52272 730 aaKnown RBP eCLIP33.05■■■□□ 2.88
PDXDC1-207ENST00000562119 GPATCH8Q9UKJ3 1502 aaKnown RBP33.02■■■□□ 2.88
PDXDC1-207ENST00000562119 SUPT6HQ7KZ85 1726 aaKnown RBP33.02■■■□□ 2.88
PDXDC1-207ENST00000562119 UBAP1LF5GYI3 381 aa33.02■■■□□ 2.88
PDXDC1-207ENST00000562119 PLA2R1Q13018 1463 aa32.99■■■□□ 2.87
PDXDC1-207ENST00000562119 MYO3AQ8NEV4 1616 aa32.99■■■□□ 2.87
PDXDC1-207ENST00000562119 ATP7AQ04656 1500 aa32.98■■■□□ 2.87
PDXDC1-207ENST00000562119 CLTCQ00610 1675 aaKnown RBP32.98■■■□□ 2.87
PDXDC1-207ENST00000562119 PLXNC1O60486 1568 aa32.98■■■□□ 2.87
PDXDC1-207ENST00000562119 PKD2Q13563 968 aa32.98■■■□□ 2.87
PDXDC1-207ENST00000562119 PTPRKQ15262 1439 aa32.98■■■□□ 2.87
PDXDC1-207ENST00000562119 ZNF142P52746 1687 aaPredicted RBP32.97■■■□□ 2.87
PDXDC1-207ENST00000562119 TCOF1Q13428 1488 aaKnown RBP32.97■■■□□ 2.87
PDXDC1-207ENST00000562119 FYCO1Q9BQS8 1478 aa32.97■■■□□ 2.87
PDXDC1-207ENST00000562119 CHIC1Q5VXU3 224 aa32.96■■■□□ 2.87
PDXDC1-207ENST00000562119 A2MP01023 1474 aa32.95■■■□□ 2.87
PDXDC1-207ENST00000562119 CEP170BQ9Y4F5 1589 aaPredicted RBP32.95■■■□□ 2.86
PDXDC1-207ENST00000562119 KIAA1107Q9UPP5 1409 aa32.94■■■□□ 2.86
PDXDC1-207ENST00000562119 INO80Q9ULG1 1556 aaPredicted RBP32.94■■■□□ 2.86
PDXDC1-207ENST00000562119 GGT6Q6P531 493 aa32.92■■■□□ 2.86
PDXDC1-207ENST00000562119 CFDP1Q9UEE9 299 aaPredicted RBP32.9■■■□□ 2.86
PDXDC1-207ENST00000562119 PLEKHH2Q8IVE3 1493 aa32.87■■■□□ 2.85
PDXDC1-207ENST00000562119 PPP6R1Q9UPN7 881 aa32.86■■■□□ 2.85
PDXDC1-207ENST00000562119 CCNB3Q8WWL7 1395 aa32.83■■■□□ 2.85
PDXDC1-207ENST00000562119 A2ML1A8K2U0 1454 aa32.8■■■□□ 2.84
PDXDC1-207ENST00000562119 ZNF644Q9H582 1327 aaPredicted RBP32.77■■■□□ 2.84
PDXDC1-207ENST00000562119 DNMT1P26358 1616 aaKnown RBP32.77■■■□□ 2.84
PDXDC1-207ENST00000562119 ADGBQ8N7X0 1667 aa32.75■■■□□ 2.83
PDXDC1-207ENST00000562119 HSPA1LP34931 641 aa32.74■■■□□ 2.83
PDXDC1-207ENST00000562119 MBD5Q9P267 1494 aa32.73■■■□□ 2.83
PDXDC1-207ENST00000562119 MTUS2Q5JR59 1369 aa32.7■■■□□ 2.83
PDXDC1-207ENST00000562119 PIP4K2BP78356 416 aa32.7■■■□□ 2.83
PDXDC1-207ENST00000562119 SCAF1Q9H7N4 1312 aaKnown RBP32.7■■■□□ 2.82
PDXDC1-207ENST00000562119 FBXO31Q5XUX0 539 aaPredicted RBP32.69■■■□□ 2.82
PDXDC1-207ENST00000562119 NEURL4Q96JN8 1562 aa32.69■■■□□ 2.82
PDXDC1-207ENST00000562119 DHX29Q7Z478 1369 aaKnown RBP32.68■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms