RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 EHBP1L1Q8N3D4 1523 aa22.24■■□□□ 1.15
AP4E1-205ENST00000561393 GRIN2AQ12879 1464 aa22.24■■□□□ 1.15
AP4E1-205ENST00000561393 PLPPR3Q6T4P5 718 aa22.24■■□□□ 1.15
AP4E1-205ENST00000561393 MAP3K1Q13233 1512 aa22.24■■□□□ 1.15
AP4E1-205ENST00000561393 RSPH4AQ5TD94 716 aa22.23■■□□□ 1.15
AP4E1-205ENST00000561393 KIF21AQ7Z4S6 1674 aa22.21■■□□□ 1.15
AP4E1-205ENST00000561393 HECW1Q76N89 1606 aa22.19■■□□□ 1.14
AP4E1-205ENST00000561393 SYNJ2O15056 1496 aa22.19■■□□□ 1.14
AP4E1-205ENST00000561393 SPAG9O60271 1321 aaKnown RBP22.18■■□□□ 1.14
AP4E1-205ENST00000561393 IRX6P78412 446 aaPredicted RBP22.18■■□□□ 1.14
AP4E1-205ENST00000561393 PLB1Q6P1J6 1458 aa22.18■■□□□ 1.14
AP4E1-205ENST00000561393 GGT6Q6P531 493 aa22.17■■□□□ 1.14
AP4E1-205ENST00000561393 TROQ12816 1431 aaPredicted RBP22.17■■□□□ 1.14
AP4E1-205ENST00000561393 HFM1A2PYH4 1435 aa22.16■■□□□ 1.14
AP4E1-205ENST00000561393 KIF3BO15066 747 aa22.15■■□□□ 1.14
AP4E1-205ENST00000561393 MAGI1Q96QZ7 1491 aaPredicted RBP22.14■■□□□ 1.13
AP4E1-205ENST00000561393 MIA2Q96PC5 1412 aa22.14■■□□□ 1.13
AP4E1-205ENST00000561393 OSCARQ8IYS5 282 aa22.14■■□□□ 1.13
AP4E1-205ENST00000561393 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.14■■□□□ 1.13
AP4E1-205ENST00000561393 SUPT6HQ7KZ85 1726 aaKnown RBP22.13■■□□□ 1.13
AP4E1-205ENST00000561393 NAIPQ13075 1403 aa22.12■■□□□ 1.13
AP4E1-205ENST00000561393 KIF15Q9NS87 1388 aa22.1■■□□□ 1.13
AP4E1-205ENST00000561393 CCER2I3L3R5 266 aa22.09■■□□□ 1.13
AP4E1-205ENST00000561393 KANK1Q14678 1352 aa22.09■■□□□ 1.13
AP4E1-205ENST00000561393 ANKRD50Q9ULJ7 1429 aa22.08■■□□□ 1.13
AP4E1-205ENST00000561393 ROCK2O75116 1388 aaKnown RBP22.04■■□□□ 1.12
AP4E1-205ENST00000561393 DAPK1P53355 1430 aa22.03■■□□□ 1.12
AP4E1-205ENST00000561393 SUPT16HQ9Y5B9 1047 aaKnown RBP22.03■■□□□ 1.12
AP4E1-205ENST00000561393 CTTNBP2Q8WZ74 1663 aa22.02■■□□□ 1.12
AP4E1-205ENST00000561393 CYB5RLQ6IPT4 315 aa22.02■■□□□ 1.12
AP4E1-205ENST00000561393 AFAP1Q8N556 730 aa22.01■■□□□ 1.11
AP4E1-205ENST00000561393 CC2D1BQ5T0F9 858 aaKnown RBP22.01■■□□□ 1.11
AP4E1-205ENST00000561393 PTPRKQ15262 1439 aa21.99■■□□□ 1.11
AP4E1-205ENST00000561393 KNSTRNQ9Y448 316 aa21.99■■□□□ 1.11
AP4E1-205ENST00000561393 WDR43Q15061 677 aaKnown RBP eCLIP21.99■■□□□ 1.11
AP4E1-205ENST00000561393 ST20-MTHFSA0A0A6YYL1 179 aa21.98■■□□□ 1.11
AP4E1-205ENST00000561393 MLECQ14165 292 aa21.98■■□□□ 1.11
AP4E1-205ENST00000561393 PTPN23Q9H3S7 1636 aa21.98■■□□□ 1.11
AP4E1-205ENST00000561393 ADAMTS12P58397 1594 aa21.98■■□□□ 1.11
AP4E1-205ENST00000561393 THOC2Q8NI27 1593 aaKnown RBP21.98■■□□□ 1.11
AP4E1-205ENST00000561393 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
AP4E1-205ENST00000561393 CCDC144AA2RUR9 1427 aa21.98■■□□□ 1.11
AP4E1-205ENST00000561393 TMF1P82094 1093 aa21.97■■□□□ 1.11
AP4E1-205ENST00000561393 CDCA8Q53HL2 280 aa21.96■■□□□ 1.11
AP4E1-205ENST00000561393 ARID4BQ4LE39 1312 aaPredicted RBP21.95■■□□□ 1.1
AP4E1-205ENST00000561393 ARHGEF11O15085 1522 aa21.95■■□□□ 1.1
AP4E1-205ENST00000561393 WDR97A6NE52 1622 aa21.94■■□□□ 1.1
AP4E1-205ENST00000561393 C9orf84Q5VXU9 1444 aa21.94■■□□□ 1.1
AP4E1-205ENST00000561393 ARHGAP5Q13017 1502 aa21.94■■□□□ 1.1
AP4E1-205ENST00000561393 ABCC5O15440 1437 aa21.93■■□□□ 1.1
AP4E1-205ENST00000561393 NBPF8Q3BBV2 869 aa21.91■■□□□ 1.1
AP4E1-205ENST00000561393 NUP153P49790 1475 aaKnown RBP21.9■■□□□ 1.1
AP4E1-205ENST00000561393 USP47Q96K76 1375 aa21.9■■□□□ 1.1
AP4E1-205ENST00000561393 WDR62O43379 1518 aa21.9■■□□□ 1.1
AP4E1-205ENST00000561393 EIF4G3O43432 1585 aaKnown RBP21.89■■□□□ 1.09
AP4E1-205ENST00000561393 CANXP27824 592 aaKnown RBP21.89■■□□□ 1.09
AP4E1-205ENST00000561393 TARBP1Q13395 1621 aaKnown RBP21.88■■□□□ 1.09
AP4E1-205ENST00000561393 UGGT2Q9NYU1 1516 aa21.87■■□□□ 1.09
AP4E1-205ENST00000561393 WASHC2CQ9Y4E1 1318 aa21.86■■□□□ 1.09
AP4E1-205ENST00000561393 WASHC2AQ641Q2 1341 aa21.86■■□□□ 1.09
AP4E1-205ENST00000561393 MYT1Q01538 1121 aa21.86■■□□□ 1.09
AP4E1-205ENST00000561393 CAMSAP2Q08AD1 1489 aa21.86■■□□□ 1.09
AP4E1-205ENST00000561393 ROCK1Q13464 1354 aa21.86■■□□□ 1.09
AP4E1-205ENST00000561393 SAFB2Q14151 953 aaKnown RBP eCLIP21.85■■□□□ 1.09
AP4E1-205ENST00000561393 NUTM2DQ5VT03 806 aaPredicted RBP21.84■■□□□ 1.09
AP4E1-205ENST00000561393 PRKRIP1Q9H875 184 aaPredicted RBP21.84■■□□□ 1.09
AP4E1-205ENST00000561393 NEFMP07197 916 aa21.83■■□□□ 1.09
AP4E1-205ENST00000561393 TNNT2P45379 298 aaPredicted RBP21.83■■□□□ 1.09
AP4E1-205ENST00000561393 CFAP43Q8NDM7 1665 aa21.83■■□□□ 1.08
AP4E1-205ENST00000561393 CCDC136Q96JN2 1154 aa21.83■■□□□ 1.08
AP4E1-205ENST00000561393 PBRM1Q86U86 1689 aa21.81■■□□□ 1.08
AP4E1-205ENST00000561393 MAPKBP1O60336 1514 aa21.81■■□□□ 1.08
AP4E1-205ENST00000561393 KIF7Q2M1P5 1343 aa21.81■■□□□ 1.08
AP4E1-205ENST00000561393 KIAA1107Q9UPP5 1409 aa21.81■■□□□ 1.08
AP4E1-205ENST00000561393 KIAA0556O60303 1618 aa21.8■■□□□ 1.08
AP4E1-205ENST00000561393 RAPGEF6Q8TEU7 1601 aa21.8■■□□□ 1.08
AP4E1-205ENST00000561393 NCOA1Q15788 1441 aa21.8■■□□□ 1.08
AP4E1-205ENST00000561393 DISP1Q96F81 1524 aa21.8■■□□□ 1.08
AP4E1-205ENST00000561393 GPATCH8Q9UKJ3 1502 aaKnown RBP21.79■■□□□ 1.08
AP4E1-205ENST00000561393 ATP10BO94823 1461 aa21.79■■□□□ 1.08
AP4E1-205ENST00000561393 CCDC7Q96M83 1385 aa21.79■■□□□ 1.08
AP4E1-205ENST00000561393 POGKQ9P215 609 aa21.78■■□□□ 1.08
AP4E1-205ENST00000561393 AKNAQ7Z591 1439 aa21.78■■□□□ 1.08
AP4E1-205ENST00000561393 STK26Q9P289 416 aa21.78■■□□□ 1.08
AP4E1-205ENST00000561393 DAXXQ9UER7 740 aaPredicted RBP21.77■■□□□ 1.08
AP4E1-205ENST00000561393 ANKRD30BQ9BXX2 1392 aa21.76■■□□□ 1.07
AP4E1-205ENST00000561393 SAMD9Q5K651 1589 aa21.76■■□□□ 1.07
AP4E1-205ENST00000561393 KTN1Q86UP2 1357 aaKnown RBP21.74■■□□□ 1.07
AP4E1-205ENST00000561393 SCAPERQ9BY12 1400 aa21.72■■□□□ 1.07
AP4E1-205ENST00000561393 KIF14Q15058 1648 aa21.72■■□□□ 1.07
AP4E1-205ENST00000561393 NUP160Q12769 1436 aa21.71■■□□□ 1.07
AP4E1-205ENST00000561393 NBPF1Q3BBV0 1214 aa21.71■■□□□ 1.07
AP4E1-205ENST00000561393 TRHP20396 242 aaPredicted RBP21.71■■□□□ 1.07
AP4E1-205ENST00000561393 NEUROD2Q15784 382 aa21.71■■□□□ 1.07
AP4E1-205ENST00000561393 TRAK1Q9UPV9 953 aa21.7■■□□□ 1.06
AP4E1-205ENST00000561393 RALBP1Q15311 655 aa21.7■■□□□ 1.06
AP4E1-205ENST00000561393 FAM69CQ0P6D2 419 aa21.69■■□□□ 1.06
AP4E1-205ENST00000561393 CCDC141Q6ZP82 1450 aa21.69■■□□□ 1.06
AP4E1-205ENST00000561393 PANK3Q9H999 370 aa21.69■■□□□ 1.06
AP4E1-205ENST00000561393 SLC24A1O60721 1099 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms