RNA–Protein interactions for RNA: ENST00000560948.1

TCF12-221, Transcript of transcription factor 12, humanhuman

TSL 2

Gene TCF12, Length 440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-221ENST00000560948 TTC37Q6PGP7 1564 aa10.2□□□□□ -0.78
TCF12-221ENST00000560948 SPATA31D1Q6ZQQ2 1576 aa10.19□□□□□ -0.78
TCF12-221ENST00000560948 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.19□□□□□ -0.78
TCF12-221ENST00000560948 HECW1Q76N89 1606 aa10.18□□□□□ -0.78
TCF12-221ENST00000560948 MAGI2Q86UL8 1455 aa10.17□□□□□ -0.78
TCF12-221ENST00000560948 CEBPAP49715 358 aaPredicted RBP10.17□□□□□ -0.78
TCF12-221ENST00000560948 PREX1Q8TCU6 1659 aa10.17□□□□□ -0.78
TCF12-221ENST00000560948 DMRT2Q9Y5R5 561 aa10.16□□□□□ -0.78
TCF12-221ENST00000560948 C9orf84Q5VXU9 1444 aa10.16□□□□□ -0.78
TCF12-221ENST00000560948 SCAPERQ9BY12 1400 aa10.16□□□□□ -0.78
TCF12-221ENST00000560948 ARHGEF12Q9NZN5 1544 aa10.15□□□□□ -0.78
TCF12-221ENST00000560948 UHRF1BP1Q6BDS2 1440 aa10.15□□□□□ -0.79
TCF12-221ENST00000560948 ATP10AO60312 1499 aa10.14□□□□□ -0.79
TCF12-221ENST00000560948 STRCQ7RTU9 1775 aa10.12□□□□□ -0.79
TCF12-221ENST00000560948 CSRNP3Q8WYN3 585 aa10.12□□□□□ -0.79
TCF12-221ENST00000560948 MYT1LQ9UL68 1186 aa10.12□□□□□ -0.79
TCF12-221ENST00000560948 CDK13Q14004 1512 aaKnown RBP10.12□□□□□ -0.79
TCF12-221ENST00000560948 PLCH2O75038 1416 aa10.11□□□□□ -0.79
TCF12-221ENST00000560948 ATP1B4Q9UN42 357 aaPredicted RBP10.09□□□□□ -0.79
TCF12-221ENST00000560948 PTPRTO14522 1441 aa10.08□□□□□ -0.8
TCF12-221ENST00000560948 EFCAB2Q5VUJ9 269 aa10.08□□□□□ -0.8
TCF12-221ENST00000560948 EHMT2Q96KQ7 1210 aa10.08□□□□□ -0.8
TCF12-221ENST00000560948 ESF1Q9H501 851 aaKnown RBP10.08□□□□□ -0.8
TCF12-221ENST00000560948 ZNF518AQ6AHZ1 1483 aa10.08□□□□□ -0.8
TCF12-221ENST00000560948 AFAP1Q8N556 730 aa10.06□□□□□ -0.8
TCF12-221ENST00000560948 LTBP4Q8N2S1 1624 aa10.06□□□□□ -0.8
TCF12-221ENST00000560948 MYO5CQ9NQX4 1742 aa10.05□□□□□ -0.8
TCF12-221ENST00000560948 ARHGAP5Q13017 1502 aa10.05□□□□□ -0.8
TCF12-221ENST00000560948 DIP2CQ9Y2E4 1556 aa10.05□□□□□ -0.8
TCF12-221ENST00000560948 IQSEC2Q5JU85 1478 aa10.04□□□□□ -0.8
TCF12-221ENST00000560948 C3P01024 1663 aa10.04□□□□□ -0.8
TCF12-221ENST00000560948 KDM5CP41229 1560 aa10.04□□□□□ -0.8
TCF12-221ENST00000560948 KIF14Q15058 1648 aa10.04□□□□□ -0.8
TCF12-221ENST00000560948 NCOA1Q15788 1441 aa10.03□□□□□ -0.8
TCF12-221ENST00000560948 CDK11AQ9UQ88 783 aaPredicted RBP10.03□□□□□ -0.8
TCF12-221ENST00000560948 TRAPPC8Q9Y2L5 1435 aa10.03□□□□□ -0.8
TCF12-221ENST00000560948 ABCA6Q8N139 1617 aa10.03□□□□□ -0.8
TCF12-221ENST00000560948 REREQ9P2R6 1566 aa10.01□□□□□ -0.81
TCF12-221ENST00000560948 EEA1Q15075 1411 aa10.01□□□□□ -0.81
TCF12-221ENST00000560948 CAMSAP1Q5T5Y3 1602 aa10.01□□□□□ -0.81
TCF12-221ENST00000560948 UBAP1LF5GYI3 381 aa10.01□□□□□ -0.81
TCF12-221ENST00000560948 CLIP1P30622 1438 aa10□□□□□ -0.81
TCF12-221ENST00000560948 ZNF335Q9H4Z2 1342 aaPredicted RBP10□□□□□ -0.81
TCF12-221ENST00000560948 FMN1Q68DA7 1419 aa9.99□□□□□ -0.81
TCF12-221ENST00000560948 MLH3Q9UHC1 1453 aa9.99□□□□□ -0.81
TCF12-221ENST00000560948 AGLP35573 1532 aa9.99□□□□□ -0.81
TCF12-221ENST00000560948 NCKAP5LQ9HCH0 1330 aa9.99□□□□□ -0.81
TCF12-221ENST00000560948 TROQ12816 1431 aaPredicted RBP9.99□□□□□ -0.81
TCF12-221ENST00000560948 CNTLNQ9NXG0 1405 aa9.99□□□□□ -0.81
TCF12-221ENST00000560948 SCAF1Q9H7N4 1312 aaKnown RBP9.98□□□□□ -0.81
TCF12-221ENST00000560948 SETD1BQ9UPS6 1966 aaKnown RBP9.97□□□□□ -0.81
TCF12-221ENST00000560948 ABCC1P33527 1531 aa9.97□□□□□ -0.81
TCF12-221ENST00000560948 NPATQ14207 1427 aa9.96□□□□□ -0.82
TCF12-221ENST00000560948 UBTFP17480 764 aaKnown RBP9.95□□□□□ -0.82
TCF12-221ENST00000560948 CDC42BPBQ9Y5S2 1711 aa9.95□□□□□ -0.82
TCF12-221ENST00000560948 ITSN2Q9NZM3 1697 aa9.94□□□□□ -0.82
TCF12-221ENST00000560948 PREX2Q70Z35 1606 aa9.94□□□□□ -0.82
TCF12-221ENST00000560948 ARHGAP35Q9NRY4 1499 aa9.94□□□□□ -0.82
TCF12-221ENST00000560948 ZMYM3Q14202 1370 aa9.94□□□□□ -0.82
TCF12-221ENST00000560948 PIP4K2BP78356 416 aa9.94□□□□□ -0.82
TCF12-221ENST00000560948 MED1Q15648 1581 aaPredicted RBP9.93□□□□□ -0.82
TCF12-221ENST00000560948 PKD2Q13563 968 aa9.93□□□□□ -0.82
TCF12-221ENST00000560948 PPP6R1Q9UPN7 881 aa9.93□□□□□ -0.82
TCF12-221ENST00000560948 KIDINS220Q9ULH0 1771 aa9.93□□□□□ -0.82
TCF12-221ENST00000560948 MROH2AA6NES4 1674 aa9.93□□□□□ -0.82
TCF12-221ENST00000560948 MYO3AQ8NEV4 1616 aa9.93□□□□□ -0.82
TCF12-221ENST00000560948 PLA2R1Q13018 1463 aa9.92□□□□□ -0.82
TCF12-221ENST00000560948 HSPA1LP34931 641 aa9.92□□□□□ -0.82
TCF12-221ENST00000560948 ZNF777Q9ULD5 760 aaPredicted RBP9.92□□□□□ -0.82
TCF12-221ENST00000560948 CEP170BQ9Y4F5 1589 aaPredicted RBP9.92□□□□□ -0.82
TCF12-221ENST00000560948 SAMD9LQ8IVG5 1584 aa9.91□□□□□ -0.82
TCF12-221ENST00000560948 TCOF1Q13428 1488 aaKnown RBP9.91□□□□□ -0.82
TCF12-221ENST00000560948 SUPT6HQ7KZ85 1726 aaKnown RBP9.9□□□□□ -0.82
TCF12-221ENST00000560948 LRRIQ1Q96JM4 1722 aa9.9□□□□□ -0.82
TCF12-221ENST00000560948 ZNF142P52746 1687 aaPredicted RBP9.9□□□□□ -0.82
TCF12-221ENST00000560948 CLTCQ00610 1675 aaKnown RBP9.9□□□□□ -0.82
TCF12-221ENST00000560948 SPAG9O60271 1321 aaKnown RBP9.89□□□□□ -0.83
TCF12-221ENST00000560948 SYCP2Q9BX26 1530 aa9.89□□□□□ -0.83
TCF12-221ENST00000560948 KCNA4P22459 653 aa9.89□□□□□ -0.83
TCF12-221ENST00000560948 GGT6Q6P531 493 aa9.89□□□□□ -0.83
TCF12-221ENST00000560948 PTPRKQ15262 1439 aa9.89□□□□□ -0.83
TCF12-221ENST00000560948 CCDC18Q5T9S5 1454 aa9.88□□□□□ -0.83
TCF12-221ENST00000560948 TOM1O60784 492 aa9.88□□□□□ -0.83
TCF12-221ENST00000560948 HNRNPMP52272 730 aaKnown RBP eCLIP9.87□□□□□ -0.83
TCF12-221ENST00000560948 ATP7AQ04656 1500 aa9.87□□□□□ -0.83
TCF12-221ENST00000560948 A2MP01023 1474 aa9.86□□□□□ -0.83
TCF12-221ENST00000560948 CDC42BPAQ5VT25 1732 aa9.86□□□□□ -0.83
TCF12-221ENST00000560948 CPS1P31327 1500 aa9.86□□□□□ -0.83
TCF12-221ENST00000560948 A2ML1A8K2U0 1454 aa9.85□□□□□ -0.83
TCF12-221ENST00000560948 PLXNC1O60486 1568 aa9.85□□□□□ -0.83
TCF12-221ENST00000560948 INO80Q9ULG1 1556 aaPredicted RBP9.84□□□□□ -0.83
TCF12-221ENST00000560948 CASKIN1Q8WXD9 1431 aa9.84□□□□□ -0.83
TCF12-221ENST00000560948 DNMT1P26358 1616 aaKnown RBP9.84□□□□□ -0.83
TCF12-221ENST00000560948 SHANK2Q9UPX8 1470 aa9.84□□□□□ -0.83
TCF12-221ENST00000560948 GPATCH8Q9UKJ3 1502 aaKnown RBP9.82□□□□□ -0.84
TCF12-221ENST00000560948 CFDP1Q9UEE9 299 aaPredicted RBP9.82□□□□□ -0.84
TCF12-221ENST00000560948 NEURL4Q96JN8 1562 aa9.82□□□□□ -0.84
TCF12-221ENST00000560948 POLR1AO95602 1720 aaPredicted RBP9.82□□□□□ -0.84
TCF12-221ENST00000560948 PLEKHH2Q8IVE3 1493 aa9.81□□□□□ -0.84
TCF12-221ENST00000560948 TNRQ92752 1358 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms