RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 ARHGEF12Q9NZN5 1544 aa19.97■□□□□ 0.79
KNSTRN-211ENST00000560673 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.96■□□□□ 0.79
KNSTRN-211ENST00000560673 HNRNPUL2Q1KMD3 747 aaKnown RBP19.96■□□□□ 0.79
KNSTRN-211ENST00000560673 SETD1BQ9UPS6 1966 aaKnown RBP19.94■□□□□ 0.78
KNSTRN-211ENST00000560673 CFAP74Q9C0B2 1584 aa19.91■□□□□ 0.78
KNSTRN-211ENST00000560673 MED1Q15648 1581 aaPredicted RBP19.91■□□□□ 0.78
KNSTRN-211ENST00000560673 P3H3Q8IVL6 736 aa19.88■□□□□ 0.77
KNSTRN-211ENST00000560673 HECW1Q76N89 1606 aa19.87■□□□□ 0.77
KNSTRN-211ENST00000560673 ATP10AO60312 1499 aa19.86■□□□□ 0.77
KNSTRN-211ENST00000560673 C9orf84Q5VXU9 1444 aa19.85■□□□□ 0.77
KNSTRN-211ENST00000560673 PHF23Q9BUL5 403 aaPredicted RBP19.84■□□□□ 0.77
KNSTRN-211ENST00000560673 NCOA1Q15788 1441 aa19.84■□□□□ 0.77
KNSTRN-211ENST00000560673 PLEKHD1A6NEE1 506 aa19.81■□□□□ 0.76
KNSTRN-211ENST00000560673 HSPA1LP34931 641 aa19.81■□□□□ 0.76
KNSTRN-211ENST00000560673 RAPGEF6Q8TEU7 1601 aa19.8■□□□□ 0.76
KNSTRN-211ENST00000560673 ZNF335Q9H4Z2 1342 aaPredicted RBP19.8■□□□□ 0.76
KNSTRN-211ENST00000560673 SCAPERQ9BY12 1400 aa19.78■□□□□ 0.76
KNSTRN-211ENST00000560673 SCAF1Q9H7N4 1312 aaKnown RBP19.77■□□□□ 0.76
KNSTRN-211ENST00000560673 TRAPPC8Q9Y2L5 1435 aa19.76■□□□□ 0.75
KNSTRN-211ENST00000560673 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.76■□□□□ 0.757e-7■■□□□ 13.6
KNSTRN-211ENST00000560673 NUP153P49790 1475 aaKnown RBP19.74■□□□□ 0.75
KNSTRN-211ENST00000560673 ESF1Q9H501 851 aaKnown RBP19.74■□□□□ 0.75
KNSTRN-211ENST00000560673 C3P01024 1663 aa19.72■□□□□ 0.75
KNSTRN-211ENST00000560673 PIP4K2BP78356 416 aa19.72■□□□□ 0.75
KNSTRN-211ENST00000560673 CAMSAP1Q5T5Y3 1602 aa19.71■□□□□ 0.75
KNSTRN-211ENST00000560673 NCKAP5LQ9HCH0 1330 aa19.7■□□□□ 0.74
KNSTRN-211ENST00000560673 TOM1O60784 492 aa19.68■□□□□ 0.74
KNSTRN-211ENST00000560673 PLCH2O75038 1416 aa19.66■□□□□ 0.74
KNSTRN-211ENST00000560673 PKD2Q13563 968 aa19.64■□□□□ 0.73
KNSTRN-211ENST00000560673 MYT1LQ9UL68 1186 aa19.64■□□□□ 0.73
KNSTRN-211ENST00000560673 PRXQ9BXM0 1461 aa19.64■□□□□ 0.73
KNSTRN-211ENST00000560673 SAMD9Q5K651 1589 aa19.64■□□□□ 0.73
KNSTRN-211ENST00000560673 EFCAB2Q5VUJ9 269 aa19.62■□□□□ 0.73
KNSTRN-211ENST00000560673 ZNF518AQ6AHZ1 1483 aa19.61■□□□□ 0.73
KNSTRN-211ENST00000560673 CNTLNQ9NXG0 1405 aa19.59■□□□□ 0.73
KNSTRN-211ENST00000560673 NPATQ14207 1427 aa19.59■□□□□ 0.73
KNSTRN-211ENST00000560673 REREQ9P2R6 1566 aa19.58■□□□□ 0.73
KNSTRN-211ENST00000560673 AGLP35573 1532 aa19.58■□□□□ 0.73
KNSTRN-211ENST00000560673 AFAP1Q8N556 730 aa19.58■□□□□ 0.72
KNSTRN-211ENST00000560673 PPP6R1Q9UPN7 881 aa19.58■□□□□ 0.72
KNSTRN-211ENST00000560673 PLA2R1Q13018 1463 aa19.57■□□□□ 0.72
KNSTRN-211ENST00000560673 DIP2CQ9Y2E4 1556 aa19.57■□□□□ 0.72
KNSTRN-211ENST00000560673 KDM5CP41229 1560 aa19.55■□□□□ 0.72
KNSTRN-211ENST00000560673 TCOF1Q13428 1488 aaKnown RBP19.54■□□□□ 0.72
KNSTRN-211ENST00000560673 CPS1P31327 1500 aa19.51■□□□□ 0.71
KNSTRN-211ENST00000560673 RGS17Q9UGC6 210 aaPredicted RBP19.5■□□□□ 0.71
KNSTRN-211ENST00000560673 PTPRKQ15262 1439 aa19.5■□□□□ 0.71
KNSTRN-211ENST00000560673 ZMYM3Q14202 1370 aa19.49■□□□□ 0.71
KNSTRN-211ENST00000560673 ABCA6Q8N139 1617 aa19.49■□□□□ 0.71
KNSTRN-211ENST00000560673 MYO5CQ9NQX4 1742 aa19.48■□□□□ 0.71
KNSTRN-211ENST00000560673 MLH3Q9UHC1 1453 aa19.48■□□□□ 0.71
KNSTRN-211ENST00000560673 RANGAP1P46060 587 aaPredicted RBP19.47■□□□□ 0.71
KNSTRN-211ENST00000560673 SENP3Q9H4L4 574 aaPredicted RBP19.46■□□□□ 0.71
KNSTRN-211ENST00000560673 ZNF142P52746 1687 aaPredicted RBP19.46■□□□□ 0.71
KNSTRN-211ENST00000560673 SUPT6HQ7KZ85 1726 aaKnown RBP19.45■□□□□ 0.7
KNSTRN-211ENST00000560673 MROH2AA6NES4 1674 aa19.45■□□□□ 0.7
KNSTRN-211ENST00000560673 CEP170BQ9Y4F5 1589 aaPredicted RBP19.44■□□□□ 0.7
KNSTRN-211ENST00000560673 SHANK2Q9UPX8 1470 aa19.44■□□□□ 0.7
KNSTRN-211ENST00000560673 CDK13Q14004 1512 aaKnown RBP19.44■□□□□ 0.7
KNSTRN-211ENST00000560673 MYO3AQ8NEV4 1616 aa19.43■□□□□ 0.7
KNSTRN-211ENST00000560673 ARHGAP5Q13017 1502 aa19.43■□□□□ 0.7
KNSTRN-211ENST00000560673 SRCAPQ6ZRS2 3230 aa19.38■□□□□ 0.69
KNSTRN-211ENST00000560673 ALKQ9UM73 1620 aa19.38■□□□□ 0.69
KNSTRN-211ENST00000560673 CDK11AQ9UQ88 783 aaPredicted RBP19.36■□□□□ 0.69
KNSTRN-211ENST00000560673 POTEAQ6S8J7 498 aa19.35■□□□□ 0.69
KNSTRN-211ENST00000560673 A2ML1A8K2U0 1454 aa19.32■□□□□ 0.68
KNSTRN-211ENST00000560673 KIF14Q15058 1648 aa19.32■□□□□ 0.68
KNSTRN-211ENST00000560673 KIDINS220Q9ULH0 1771 aa19.31■□□□□ 0.68
KNSTRN-211ENST00000560673 CLTCQ00610 1675 aaKnown RBP19.3■□□□□ 0.68
KNSTRN-211ENST00000560673 ATP1B4Q9UN42 357 aaPredicted RBP19.3■□□□□ 0.68
KNSTRN-211ENST00000560673 DNMT1P26358 1616 aaKnown RBP19.29■□□□□ 0.68
KNSTRN-211ENST00000560673 POLR1AO95602 1720 aaPredicted RBP19.28■□□□□ 0.68
KNSTRN-211ENST00000560673 VWDEQ8N2E2 1590 aa19.28■□□□□ 0.68
KNSTRN-211ENST00000560673 NEURL4Q96JN8 1562 aa19.28■□□□□ 0.68
KNSTRN-211ENST00000560673 ABCC1P33527 1531 aa19.27■□□□□ 0.68
KNSTRN-211ENST00000560673 ANKLE2Q86XL3 938 aa19.26■□□□□ 0.67
KNSTRN-211ENST00000560673 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
KNSTRN-211ENST00000560673 CLIP1P30622 1438 aa19.25■□□□□ 0.67
KNSTRN-211ENST00000560673 TROQ12816 1431 aaPredicted RBP19.25■□□□□ 0.67
KNSTRN-211ENST00000560673 ITSN2Q9NZM3 1697 aa19.24■□□□□ 0.67
KNSTRN-211ENST00000560673 CDC42BPBQ9Y5S2 1711 aa19.23■□□□□ 0.67
KNSTRN-211ENST00000560673 GGT6Q6P531 493 aa19.23■□□□□ 0.67
KNSTRN-211ENST00000560673 RNF17Q9BXT8 1623 aaKnown RBP19.22■□□□□ 0.67
KNSTRN-211ENST00000560673 SETD1AO15047 1707 aaKnown RBP19.21■□□□□ 0.67
KNSTRN-211ENST00000560673 LRRC7Q96NW7 1537 aa19.2■□□□□ 0.66
KNSTRN-211ENST00000560673 SPAG9O60271 1321 aaKnown RBP19.19■□□□□ 0.66
KNSTRN-211ENST00000560673 NPHP4O75161 1426 aaPredicted RBP19.18■□□□□ 0.66
KNSTRN-211ENST00000560673 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.18■□□□□ 0.66
KNSTRN-211ENST00000560673 UPF1Q92900 1129 aaKnown RBP eCLIP19.17■□□□□ 0.66
KNSTRN-211ENST00000560673 SAMD9LQ8IVG5 1584 aa19.17■□□□□ 0.66
KNSTRN-211ENST00000560673 PREX2Q70Z35 1606 aa19.17■□□□□ 0.66
KNSTRN-211ENST00000560673 MED14O60244 1454 aa19.16■□□□□ 0.66
KNSTRN-211ENST00000560673 THEMISQ8N1K5 641 aaPredicted RBP19.16■□□□□ 0.66
KNSTRN-211ENST00000560673 TNRQ92752 1358 aa19.15■□□□□ 0.66
KNSTRN-211ENST00000560673 FMN1Q68DA7 1419 aa19.15■□□□□ 0.66
KNSTRN-211ENST00000560673 SYNMO15061 1565 aa19.15■□□□□ 0.66
KNSTRN-211ENST00000560673 A2MP01023 1474 aa19.14■□□□□ 0.65
KNSTRN-211ENST00000560673 PLXNC1O60486 1568 aa19.14■□□□□ 0.65
KNSTRN-211ENST00000560673 DEPDC5O75140 1603 aa19.11■□□□□ 0.65
KNSTRN-211ENST00000560673 FBXO31Q5XUX0 539 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms