RNA–Protein interactions for RNA: ENST00000560660.1

IVD-212, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 2

Gene IVD, Length 638 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-212ENST00000560660 TTC37Q6PGP7 1564 aa20.18■□□□□ 0.82
IVD-212ENST00000560660 MAGI2Q86UL8 1455 aa20.17■□□□□ 0.82
IVD-212ENST00000560660 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.16■□□□□ 0.82
IVD-212ENST00000560660 SPATA31D1Q6ZQQ2 1576 aa20.16■□□□□ 0.82
IVD-212ENST00000560660 CFAP74Q9C0B2 1584 aa20.16■□□□□ 0.82
IVD-212ENST00000560660 HECW1Q76N89 1606 aa20.16■□□□□ 0.82
IVD-212ENST00000560660 PREX1Q8TCU6 1659 aa20.14■□□□□ 0.81
IVD-212ENST00000560660 STRCQ7RTU9 1775 aa20.13■□□□□ 0.81
IVD-212ENST00000560660 SCAPERQ9BY12 1400 aa20.13■□□□□ 0.81
IVD-212ENST00000560660 ATP10AO60312 1499 aa20.11■□□□□ 0.81
IVD-212ENST00000560660 ARHGEF12Q9NZN5 1544 aa20.11■□□□□ 0.81
IVD-212ENST00000560660 UHRF1BP1Q6BDS2 1440 aa20.09■□□□□ 0.81
IVD-212ENST00000560660 CSRNP3Q8WYN3 585 aa20.08■□□□□ 0.81
IVD-212ENST00000560660 C9orf84Q5VXU9 1444 aa20.07■□□□□ 0.8
IVD-212ENST00000560660 PLCH2O75038 1416 aa20.05■□□□□ 0.8
IVD-212ENST00000560660 PTPRTO14522 1441 aa20.04■□□□□ 0.8
IVD-212ENST00000560660 MYT1LQ9UL68 1186 aa20.03■□□□□ 0.8
IVD-212ENST00000560660 EFCAB2Q5VUJ9 269 aa20.02■□□□□ 0.8
IVD-212ENST00000560660 SETD1BQ9UPS6 1966 aaKnown RBP20.01■□□□□ 0.79
IVD-212ENST00000560660 AFAP1Q8N556 730 aa20■□□□□ 0.79
IVD-212ENST00000560660 LTBP4Q8N2S1 1624 aa19.99■□□□□ 0.79
IVD-212ENST00000560660 ESF1Q9H501 851 aaKnown RBP19.97■□□□□ 0.79
IVD-212ENST00000560660 CDK13Q14004 1512 aaKnown RBP19.97■□□□□ 0.79
IVD-212ENST00000560660 ATP1B4Q9UN42 357 aaPredicted RBP19.96■□□□□ 0.79
IVD-212ENST00000560660 IQSEC2Q5JU85 1478 aa19.93■□□□□ 0.78
IVD-212ENST00000560660 UBAP1LF5GYI3 381 aa19.92■□□□□ 0.78
IVD-212ENST00000560660 ZNF518AQ6AHZ1 1483 aa19.92■□□□□ 0.78
IVD-212ENST00000560660 TRAPPC8Q9Y2L5 1435 aa19.91■□□□□ 0.78
IVD-212ENST00000560660 C3P01024 1663 aa19.91■□□□□ 0.78
IVD-212ENST00000560660 NCOA1Q15788 1441 aa19.89■□□□□ 0.77
IVD-212ENST00000560660 MYO5CQ9NQX4 1742 aa19.88■□□□□ 0.77
IVD-212ENST00000560660 CDK11AQ9UQ88 783 aaPredicted RBP19.87■□□□□ 0.77
IVD-212ENST00000560660 ZNF335Q9H4Z2 1342 aaPredicted RBP19.86■□□□□ 0.77
IVD-212ENST00000560660 NCKAP5LQ9HCH0 1330 aa19.86■□□□□ 0.77
IVD-212ENST00000560660 DIP2CQ9Y2E4 1556 aa19.86■□□□□ 0.77
IVD-212ENST00000560660 KDM5CP41229 1560 aa19.85■□□□□ 0.77
IVD-212ENST00000560660 ARHGAP5Q13017 1502 aa19.85■□□□□ 0.77
IVD-212ENST00000560660 CAMSAP1Q5T5Y3 1602 aa19.82■□□□□ 0.76
IVD-212ENST00000560660 KIF14Q15058 1648 aa19.81■□□□□ 0.76
IVD-212ENST00000560660 REREQ9P2R6 1566 aa19.81■□□□□ 0.76
IVD-212ENST00000560660 ABCA6Q8N139 1617 aa19.8■□□□□ 0.76
IVD-212ENST00000560660 MLH3Q9UHC1 1453 aa19.8■□□□□ 0.76
IVD-212ENST00000560660 AGLP35573 1532 aa19.78■□□□□ 0.76
IVD-212ENST00000560660 CNTLNQ9NXG0 1405 aa19.77■□□□□ 0.76
IVD-212ENST00000560660 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
IVD-212ENST00000560660 ZMYM3Q14202 1370 aa19.75■□□□□ 0.75
IVD-212ENST00000560660 HSPA1LP34931 641 aa19.75■□□□□ 0.75
IVD-212ENST00000560660 EHMT2Q96KQ7 1210 aa19.75■□□□□ 0.75
IVD-212ENST00000560660 TROQ12816 1431 aaPredicted RBP19.75■□□□□ 0.75
IVD-212ENST00000560660 PKD2Q13563 968 aa19.74■□□□□ 0.75
IVD-212ENST00000560660 EEA1Q15075 1411 aa19.74■□□□□ 0.75
IVD-212ENST00000560660 PIP4K2BP78356 416 aa19.73■□□□□ 0.75
IVD-212ENST00000560660 NPATQ14207 1427 aa19.73■□□□□ 0.75
IVD-212ENST00000560660 FMN1Q68DA7 1419 aa19.73■□□□□ 0.75
IVD-212ENST00000560660 CLIP1P30622 1438 aa19.72■□□□□ 0.75
IVD-212ENST00000560660 CDC42BPBQ9Y5S2 1711 aa19.71■□□□□ 0.75
IVD-212ENST00000560660 UBTFP17480 764 aaKnown RBP19.69■□□□□ 0.74
IVD-212ENST00000560660 PPP6R1Q9UPN7 881 aa19.68■□□□□ 0.74
IVD-212ENST00000560660 KIDINS220Q9ULH0 1771 aa19.67■□□□□ 0.74
IVD-212ENST00000560660 MED1Q15648 1581 aaPredicted RBP19.67■□□□□ 0.74
IVD-212ENST00000560660 ABCC1P33527 1531 aa19.66■□□□□ 0.74
IVD-212ENST00000560660 TOM1O60784 492 aa19.66■□□□□ 0.74
IVD-212ENST00000560660 ZNF777Q9ULD5 760 aaPredicted RBP19.65■□□□□ 0.74
IVD-212ENST00000560660 PLA2R1Q13018 1463 aa19.65■□□□□ 0.74
IVD-212ENST00000560660 MROH2AA6NES4 1674 aa19.65■□□□□ 0.74
IVD-212ENST00000560660 TCOF1Q13428 1488 aaKnown RBP19.64■□□□□ 0.73
IVD-212ENST00000560660 ITSN2Q9NZM3 1697 aa19.64■□□□□ 0.73
IVD-212ENST00000560660 ARHGAP35Q9NRY4 1499 aa19.63■□□□□ 0.73
IVD-212ENST00000560660 GGT6Q6P531 493 aa19.62■□□□□ 0.73
IVD-212ENST00000560660 SUPT6HQ7KZ85 1726 aaKnown RBP19.62■□□□□ 0.73
IVD-212ENST00000560660 SPAG9O60271 1321 aaKnown RBP19.61■□□□□ 0.73
IVD-212ENST00000560660 SENP3Q9H4L4 574 aaPredicted RBP19.61■□□□□ 0.73
IVD-212ENST00000560660 PREX2Q70Z35 1606 aa19.61■□□□□ 0.73
IVD-212ENST00000560660 CEP170BQ9Y4F5 1589 aaPredicted RBP19.61■□□□□ 0.73
IVD-212ENST00000560660 PTPRKQ15262 1439 aa19.6■□□□□ 0.73
IVD-212ENST00000560660 CLTCQ00610 1675 aaKnown RBP19.6■□□□□ 0.73
IVD-212ENST00000560660 HNRNPMP52272 730 aaKnown RBP eCLIP19.6■□□□□ 0.73
IVD-212ENST00000560660 MYO3AQ8NEV4 1616 aa19.6■□□□□ 0.73
IVD-212ENST00000560660 LRRIQ1Q96JM4 1722 aa19.59■□□□□ 0.73
IVD-212ENST00000560660 SAMD9LQ8IVG5 1584 aa19.58■□□□□ 0.73
IVD-212ENST00000560660 ZNF142P52746 1687 aaPredicted RBP19.58■□□□□ 0.72
IVD-212ENST00000560660 CDC42BPAQ5VT25 1732 aa19.52■□□□□ 0.72
IVD-212ENST00000560660 SHANK2Q9UPX8 1470 aa19.52■□□□□ 0.72
IVD-212ENST00000560660 CPS1P31327 1500 aa19.51■□□□□ 0.71
IVD-212ENST00000560660 A2ML1A8K2U0 1454 aa19.51■□□□□ 0.71
IVD-212ENST00000560660 A2MP01023 1474 aa19.51■□□□□ 0.71
IVD-212ENST00000560660 SYCP2Q9BX26 1530 aa19.51■□□□□ 0.71
IVD-212ENST00000560660 DNMT1P26358 1616 aaKnown RBP19.5■□□□□ 0.71
IVD-212ENST00000560660 ATP7AQ04656 1500 aa19.48■□□□□ 0.71
IVD-212ENST00000560660 FBXO31Q5XUX0 539 aaPredicted RBP19.47■□□□□ 0.71
IVD-212ENST00000560660 ANKLE2Q86XL3 938 aa19.47■□□□□ 0.71
IVD-212ENST00000560660 CCDC18Q5T9S5 1454 aa19.47■□□□□ 0.71
IVD-212ENST00000560660 PLXNC1O60486 1568 aa19.46■□□□□ 0.71
IVD-212ENST00000560660 GPATCH8Q9UKJ3 1502 aaKnown RBP19.46■□□□□ 0.71
IVD-212ENST00000560660 CASKIN1Q8WXD9 1431 aa19.45■□□□□ 0.7
IVD-212ENST00000560660 CFDP1Q9UEE9 299 aaPredicted RBP19.45■□□□□ 0.7
IVD-212ENST00000560660 NEURL4Q96JN8 1562 aa19.44■□□□□ 0.7
IVD-212ENST00000560660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.43■□□□□ 0.7
IVD-212ENST00000560660 KIAA1107Q9UPP5 1409 aa19.42■□□□□ 0.7
IVD-212ENST00000560660 RGS17Q9UGC6 210 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms