RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 KDM6BO15054 1643 aa24.69■■□□□ 1.54
TRPM1-211ENST00000560658 CHIC2Q9UKJ5 165 aa24.69■■□□□ 1.54
TRPM1-211ENST00000560658 TROQ12816 1431 aaPredicted RBP24.69■■□□□ 1.54
TRPM1-211ENST00000560658 EIF4G3O43432 1585 aaKnown RBP24.68■■□□□ 1.54
TRPM1-211ENST00000560658 ANKRD30BQ9BXX2 1392 aa24.67■■□□□ 1.54
TRPM1-211ENST00000560658 HIRIP3Q9BW71 556 aaPredicted RBP24.67■■□□□ 1.54
TRPM1-211ENST00000560658 ADCY10Q96PN6 1610 aa24.67■■□□□ 1.54
TRPM1-211ENST00000560658 HSPA5P11021 654 aaKnown RBP24.65■■□□□ 1.54
TRPM1-211ENST00000560658 CNTLNQ9NXG0 1405 aa24.63■■□□□ 1.53
TRPM1-211ENST00000560658 SYNJ2O15056 1496 aa24.63■■□□□ 1.53
TRPM1-211ENST00000560658 ADGRL2O95490 1459 aa24.63■■□□□ 1.53
TRPM1-211ENST00000560658 ADGBQ8N7X0 1667 aa24.62■■□□□ 1.53
TRPM1-211ENST00000560658 CARMIL2Q6F5E8 1435 aa24.61■■□□□ 1.53
TRPM1-211ENST00000560658 NCOA1Q15788 1441 aa24.61■■□□□ 1.53
TRPM1-211ENST00000560658 WASHC2AQ641Q2 1341 aa24.6■■□□□ 1.53
TRPM1-211ENST00000560658 FKBP8Q14318 412 aa24.6■■□□□ 1.53
TRPM1-211ENST00000560658 TEX14Q8IWB6 1497 aa24.59■■□□□ 1.53
TRPM1-211ENST00000560658 L3MBTL2Q969R5 705 aa24.58■■□□□ 1.53
TRPM1-211ENST00000560658 TSHZ2Q9NRE2 1034 aa24.58■■□□□ 1.53
TRPM1-211ENST00000560658 CAMSAP2Q08AD1 1489 aa24.57■■□□□ 1.52
TRPM1-211ENST00000560658 NUP160Q12769 1436 aa24.54■■□□□ 1.52
TRPM1-211ENST00000560658 GPATCH8Q9UKJ3 1502 aaKnown RBP24.53■■□□□ 1.52
TRPM1-211ENST00000560658 CCDC7Q96M83 1385 aa24.53■■□□□ 1.52
TRPM1-211ENST00000560658 CROCC2H7BZ55 1655 aa24.53■■□□□ 1.52
TRPM1-211ENST00000560658 ERICH6BQ5W0A0 696 aa24.53■■□□□ 1.52
TRPM1-211ENST00000560658 POLR1AO95602 1720 aaPredicted RBP24.53■■□□□ 1.52
TRPM1-211ENST00000560658 CEP170Q5SW79 1584 aa24.52■■□□□ 1.52
TRPM1-211ENST00000560658 OSCARQ8IYS5 282 aa24.51■■□□□ 1.51
TRPM1-211ENST00000560658 SLC4A1APQ9BWU0 796 aaKnown RBP24.51■■□□□ 1.51
TRPM1-211ENST00000560658 SHANK2Q9UPX8 1470 aa24.51■■□□□ 1.51
TRPM1-211ENST00000560658 CFDP1Q9UEE9 299 aaPredicted RBP24.5■■□□□ 1.51
TRPM1-211ENST00000560658 PZPP20742 1482 aa24.5■■□□□ 1.51
TRPM1-211ENST00000560658 ANKRD30AQ9BXX3 1397 aa24.5■■□□□ 1.51
TRPM1-211ENST00000560658 SPATA31E1Q6ZUB1 1445 aa24.49■■□□□ 1.51
TRPM1-211ENST00000560658 CHMP7Q8WUX9 453 aaPredicted RBP24.48■■□□□ 1.51
TRPM1-211ENST00000560658 PRG4Q92954 1404 aaPredicted RBP24.48■■□□□ 1.51
TRPM1-211ENST00000560658 KIAA1107Q9UPP5 1409 aa24.48■■□□□ 1.51
TRPM1-211ENST00000560658 ARID4BQ4LE39 1312 aaPredicted RBP24.45■■□□□ 1.51
TRPM1-211ENST00000560658 MBD5Q9P267 1494 aa24.44■■□□□ 1.5
TRPM1-211ENST00000560658 ABCA8O94911 1581 aa24.43■■□□□ 1.5
TRPM1-211ENST00000560658 ZNF644Q9H582 1327 aaPredicted RBP24.42■■□□□ 1.5
TRPM1-211ENST00000560658 PLB1Q6P1J6 1458 aa24.42■■□□□ 1.5
TRPM1-211ENST00000560658 KIF14Q15058 1648 aa24.42■■□□□ 1.5
TRPM1-211ENST00000560658 HNRNPUQ00839 825 aaKnown RBP eCLIP24.42■■□□□ 1.5
TRPM1-211ENST00000560658 ARID3CA6NKF2 412 aa24.41■■□□□ 1.5
TRPM1-211ENST00000560658 PRKRIP1Q9H875 184 aaPredicted RBP24.4■■□□□ 1.5
TRPM1-211ENST00000560658 KDM5DQ9BY66 1539 aa24.4■■□□□ 1.5
TRPM1-211ENST00000560658 NBPF8Q3BBV2 869 aa24.39■■□□□ 1.49
TRPM1-211ENST00000560658 JPH4Q96JJ6 628 aa24.39■■□□□ 1.49
TRPM1-211ENST00000560658 ABCC10Q5T3U5 1492 aa24.37■■□□□ 1.49
TRPM1-211ENST00000560658 ARHGEF12Q9NZN5 1544 aa24.36■■□□□ 1.49
TRPM1-211ENST00000560658 PLEKHD1A6NEE1 506 aa24.36■■□□□ 1.49
TRPM1-211ENST00000560658 UHRF1BP1Q6BDS2 1440 aa24.36■■□□□ 1.49
TRPM1-211ENST00000560658 ANKRD50Q9ULJ7 1429 aa24.36■■□□□ 1.49
TRPM1-211ENST00000560658 FOXD1Q16676 465 aa24.35■■□□□ 1.49
TRPM1-211ENST00000560658 BCANQ96GW7 911 aa24.35■■□□□ 1.49
TRPM1-211ENST00000560658 ARHGEF5Q12774 1597 aa24.35■■□□□ 1.49
TRPM1-211ENST00000560658 KIF7Q2M1P5 1343 aa24.33■■□□□ 1.48
TRPM1-211ENST00000560658 ROCK2O75116 1388 aaKnown RBP24.32■■□□□ 1.48
TRPM1-211ENST00000560658 ZBED9Q6R2W3 1325 aa24.31■■□□□ 1.48
TRPM1-211ENST00000560658 CDC42BPAQ5VT25 1732 aa24.31■■□□□ 1.48
TRPM1-211ENST00000560658 C9orf84Q5VXU9 1444 aa24.3■■□□□ 1.48
TRPM1-211ENST00000560658 ATP10BO94823 1461 aa24.29■■□□□ 1.48
TRPM1-211ENST00000560658 C11orf95C9JLR9 678 aaPredicted RBP24.28■■□□□ 1.48
TRPM1-211ENST00000560658 RSPH4AQ5TD94 716 aa24.28■■□□□ 1.48
TRPM1-211ENST00000560658 RALGAPBQ86X10 1494 aa24.28■■□□□ 1.48
TRPM1-211ENST00000560658 PTPRGP23470 1445 aa24.26■■□□□ 1.47
TRPM1-211ENST00000560658 PKD2Q13563 968 aa24.25■■□□□ 1.47
TRPM1-211ENST00000560658 MRS2Q9HD23 443 aa24.25■■□□□ 1.47
TRPM1-211ENST00000560658 USP47Q96K76 1375 aa24.25■■□□□ 1.47
TRPM1-211ENST00000560658 TSPY4P0CV99 314 aa24.24■■□□□ 1.47
TRPM1-211ENST00000560658 TSPY10P0CW01 314 aa24.24■■□□□ 1.47
TRPM1-211ENST00000560658 KDM5CP41229 1560 aa24.24■■□□□ 1.47
TRPM1-211ENST00000560658 ZNF777Q9ULD5 760 aaPredicted RBP24.23■■□□□ 1.47
TRPM1-211ENST00000560658 KTN1Q86UP2 1357 aaKnown RBP24.21■■□□□ 1.47
TRPM1-211ENST00000560658 NUP155O75694 1391 aa24.2■■□□□ 1.46
TRPM1-211ENST00000560658 FBLN2P98095 1184 aa24.18■■□□□ 1.46
TRPM1-211ENST00000560658 ANP32EQ9BTT0 268 aa24.18■■□□□ 1.46
TRPM1-211ENST00000560658 PPP4R2Q9NY27 417 aa24.18■■□□□ 1.46
TRPM1-211ENST00000560658 CCDC141Q6ZP82 1450 aa24.18■■□□□ 1.46
TRPM1-211ENST00000560658 DHX29Q7Z478 1369 aaKnown RBP24.18■■□□□ 1.46
TRPM1-211ENST00000560658 MAST1Q9Y2H9 1570 aa24.16■■□□□ 1.46
TRPM1-211ENST00000560658 KIF15Q9NS87 1388 aa24.15■■□□□ 1.46
TRPM1-211ENST00000560658 RBM19Q9Y4C8 960 aaKnown RBP24.15■■□□□ 1.46
TRPM1-211ENST00000560658 PREX2Q70Z35 1606 aa24.14■■□□□ 1.46
TRPM1-211ENST00000560658 CCDC184Q52MB2 194 aa24.11■■□□□ 1.45
TRPM1-211ENST00000560658 FAM9BQ8IZU0 186 aa24.11■■□□□ 1.45
TRPM1-211ENST00000560658 BCORL1Q5H9F3 1711 aa24.11■■□□□ 1.45
TRPM1-211ENST00000560658 PLEKHH2Q8IVE3 1493 aa24.1■■□□□ 1.45
TRPM1-211ENST00000560658 SMG6Q86US8 1419 aaKnown RBP24.1■■□□□ 1.45
TRPM1-211ENST00000560658 SAMD9LQ8IVG5 1584 aa24.07■■□□□ 1.44
TRPM1-211ENST00000560658 RIMBP3CA6NJZ7 1639 aa24.06■■□□□ 1.44
TRPM1-211ENST00000560658 RIMBP3BA6NNM3 1639 aa24.06■■□□□ 1.44
TRPM1-211ENST00000560658 RIMBP3Q9UFD9 1639 aa24.06■■□□□ 1.44
TRPM1-211ENST00000560658 UNC13BO14795 1591 aa24.05■■□□□ 1.44
TRPM1-211ENST00000560658 FAM135AQ9P2D6 1515 aa24.05■■□□□ 1.44
TRPM1-211ENST00000560658 CARD11Q9BXL7 1154 aa24.05■■□□□ 1.44
TRPM1-211ENST00000560658 FANCIQ9NVI1 1328 aa24.04■■□□□ 1.44
TRPM1-211ENST00000560658 CDC42BPBQ9Y5S2 1711 aa24.03■■□□□ 1.44
TRPM1-211ENST00000560658 PLXNC1O60486 1568 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms