RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 CDK13Q14004 1512 aaKnown RBP27.97■■■□□ 2.07
HERC1-207ENST00000560316 PLCH2O75038 1416 aa27.94■■■□□ 2.06
HERC1-207ENST00000560316 EEA1Q15075 1411 aa27.93■■■□□ 2.06
HERC1-207ENST00000560316 CEBPAP49715 358 aaPredicted RBP27.91■■■□□ 2.06
HERC1-207ENST00000560316 ARHGEF12Q9NZN5 1544 aa27.91■■■□□ 2.06
HERC1-207ENST00000560316 ATP10AO60312 1499 aa27.9■■■□□ 2.06
HERC1-207ENST00000560316 C9orf84Q5VXU9 1444 aa27.88■■■□□ 2.05
HERC1-207ENST00000560316 ATP1B4Q9UN42 357 aaPredicted RBP27.85■■■□□ 2.05
HERC1-207ENST00000560316 PREX1Q8TCU6 1659 aa27.84■■■□□ 2.05
HERC1-207ENST00000560316 EFCAB2Q5VUJ9 269 aa27.84■■■□□ 2.05
HERC1-207ENST00000560316 MYO5CQ9NQX4 1742 aa27.79■■■□□ 2.04
HERC1-207ENST00000560316 DISP3Q9P2K9 1392 aa27.77■■■□□ 2.04
HERC1-207ENST00000560316 ILDR2Q71H61 639 aa27.77■■■□□ 2.04
HERC1-207ENST00000560316 AFAP1Q8N556 730 aa27.77■■■□□ 2.04
HERC1-207ENST00000560316 STRCQ7RTU9 1775 aa27.77■■■□□ 2.04
HERC1-207ENST00000560316 EHMT2Q96KQ7 1210 aa27.76■■■□□ 2.03
HERC1-207ENST00000560316 DMRT2Q9Y5R5 561 aa27.76■■■□□ 2.03
HERC1-207ENST00000560316 KIF14Q15058 1648 aa27.75■■■□□ 2.03
HERC1-207ENST00000560316 ZNF518AQ6AHZ1 1483 aa27.75■■■□□ 2.03
HERC1-207ENST00000560316 UHRF1BP1Q6BDS2 1440 aa27.75■■■□□ 2.03
HERC1-207ENST00000560316 MYT1LQ9UL68 1186 aa27.74■■■□□ 2.03
HERC1-207ENST00000560316 CDK11AQ9UQ88 783 aaPredicted RBP27.73■■■□□ 2.03
HERC1-207ENST00000560316 FMN1Q68DA7 1419 aa27.72■■■□□ 2.03
HERC1-207ENST00000560316 ARHGAP5Q13017 1502 aa27.72■■■□□ 2.03
HERC1-207ENST00000560316 KDM5CP41229 1560 aa27.7■■■□□ 2.03
HERC1-207ENST00000560316 UBTFP17480 764 aaKnown RBP27.68■■■□□ 2.02
HERC1-207ENST00000560316 DIP2CQ9Y2E4 1556 aa27.68■■■□□ 2.02
HERC1-207ENST00000560316 TROQ12816 1431 aaPredicted RBP27.67■■■□□ 2.02
HERC1-207ENST00000560316 SETD1BQ9UPS6 1966 aaKnown RBP27.66■■■□□ 2.02
HERC1-207ENST00000560316 ARHGAP35Q9NRY4 1499 aa27.66■■■□□ 2.02
HERC1-207ENST00000560316 SOCS7O14512 581 aa27.64■■■□□ 2.02
HERC1-207ENST00000560316 ABCA6Q8N139 1617 aa27.62■■■□□ 2.01
HERC1-207ENST00000560316 C3P01024 1663 aa27.62■■■□□ 2.01
HERC1-207ENST00000560316 PTPRTO14522 1441 aa27.61■■■□□ 2.01
HERC1-207ENST00000560316 CLIP1P30622 1438 aa27.61■■■□□ 2.01
HERC1-207ENST00000560316 REREQ9P2R6 1566 aa27.6■■■□□ 2.01
HERC1-207ENST00000560316 ESF1Q9H501 851 aaKnown RBP27.59■■■□□ 2.01
HERC1-207ENST00000560316 MLH3Q9UHC1 1453 aa27.58■■■□□ 2.01
HERC1-207ENST00000560316 TRAPPC8Q9Y2L5 1435 aa27.58■■■□□ 2
HERC1-207ENST00000560316 CDC42BPBQ9Y5S2 1711 aa27.57■■■□□ 2
HERC1-207ENST00000560316 LRRIQ1Q96JM4 1722 aa27.55■■■□□ 2
HERC1-207ENST00000560316 AGLP35573 1532 aa27.55■■■□□ 2
HERC1-207ENST00000560316 LTBP4Q8N2S1 1624 aa27.53■■■□□ 2
HERC1-207ENST00000560316 SPATA31D1Q6ZQQ2 1576 aa27.53■■■□□ 2
HERC1-207ENST00000560316 ABCC1P33527 1531 aa27.51■■■□□ 2
HERC1-207ENST00000560316 NCOA1Q15788 1441 aa27.5■■□□□ 1.99
HERC1-207ENST00000560316 PREX2Q70Z35 1606 aa27.49■■□□□ 1.99
HERC1-207ENST00000560316 ITSN2Q9NZM3 1697 aa27.48■■□□□ 1.99
HERC1-207ENST00000560316 KIDINS220Q9ULH0 1771 aa27.46■■□□□ 1.99
HERC1-207ENST00000560316 CNTLNQ9NXG0 1405 aa27.45■■□□□ 1.98
HERC1-207ENST00000560316 IQSEC2Q5JU85 1478 aa27.42■■□□□ 1.98
HERC1-207ENST00000560316 CAMSAP1Q5T5Y3 1602 aa27.41■■□□□ 1.98
HERC1-207ENST00000560316 ZNF777Q9ULD5 760 aaPredicted RBP27.38■■□□□ 1.97
HERC1-207ENST00000560316 NCKAP5LQ9HCH0 1330 aa27.38■■□□□ 1.97
HERC1-207ENST00000560316 CCDC18Q5T9S5 1454 aa27.38■■□□□ 1.97
HERC1-207ENST00000560316 ZMYM3Q14202 1370 aa27.37■■□□□ 1.97
HERC1-207ENST00000560316 NPATQ14207 1427 aa27.37■■□□□ 1.97
HERC1-207ENST00000560316 CDC42BPAQ5VT25 1732 aa27.37■■□□□ 1.97
HERC1-207ENST00000560316 CASKIN1Q8WXD9 1431 aa27.37■■□□□ 1.97
HERC1-207ENST00000560316 SAMD9LQ8IVG5 1584 aa27.36■■□□□ 1.97
HERC1-207ENST00000560316 ZNF335Q9H4Z2 1342 aaPredicted RBP27.35■■□□□ 1.97
HERC1-207ENST00000560316 MROH2AA6NES4 1674 aa27.33■■□□□ 1.97
HERC1-207ENST00000560316 SPAG9O60271 1321 aaKnown RBP27.32■■□□□ 1.96
HERC1-207ENST00000560316 SYCP2Q9BX26 1530 aa27.31■■□□□ 1.96
HERC1-207ENST00000560316 HNRNPMP52272 730 aaKnown RBP eCLIP27.31■■□□□ 1.96
HERC1-207ENST00000560316 SUPT6HQ7KZ85 1726 aaKnown RBP27.3■■□□□ 1.96
HERC1-207ENST00000560316 UBAP1LF5GYI3 381 aa27.3■■□□□ 1.96
HERC1-207ENST00000560316 CLTCQ00610 1675 aaKnown RBP27.27■■□□□ 1.96
HERC1-207ENST00000560316 GPATCH8Q9UKJ3 1502 aaKnown RBP27.26■■□□□ 1.95
HERC1-207ENST00000560316 MYO3AQ8NEV4 1616 aa27.24■■□□□ 1.95
HERC1-207ENST00000560316 PKD2Q13563 968 aa27.24■■□□□ 1.95
HERC1-207ENST00000560316 ATP7AQ04656 1500 aa27.24■■□□□ 1.95
HERC1-207ENST00000560316 PTPRKQ15262 1439 aa27.23■■□□□ 1.95
HERC1-207ENST00000560316 PLA2R1Q13018 1463 aa27.22■■□□□ 1.95
HERC1-207ENST00000560316 CHIC1Q5VXU3 224 aa27.22■■□□□ 1.95
HERC1-207ENST00000560316 GGT6Q6P531 493 aa27.22■■□□□ 1.95
HERC1-207ENST00000560316 ZNF142P52746 1687 aaPredicted RBP27.21■■□□□ 1.95
HERC1-207ENST00000560316 A2MP01023 1474 aa27.21■■□□□ 1.95
HERC1-207ENST00000560316 PLXNC1O60486 1568 aa27.21■■□□□ 1.95
HERC1-207ENST00000560316 CEP170BQ9Y4F5 1589 aaPredicted RBP27.21■■□□□ 1.95
HERC1-207ENST00000560316 TCOF1Q13428 1488 aaKnown RBP27.2■■□□□ 1.95
HERC1-207ENST00000560316 FYCO1Q9BQS8 1478 aa27.2■■□□□ 1.95
HERC1-207ENST00000560316 INO80Q9ULG1 1556 aaPredicted RBP27.18■■□□□ 1.94
HERC1-207ENST00000560316 CFDP1Q9UEE9 299 aaPredicted RBP27.18■■□□□ 1.94
HERC1-207ENST00000560316 KIAA1107Q9UPP5 1409 aa27.17■■□□□ 1.94
HERC1-207ENST00000560316 PPP6R1Q9UPN7 881 aa27.16■■□□□ 1.94
HERC1-207ENST00000560316 PLEKHH2Q8IVE3 1493 aa27.14■■□□□ 1.94
HERC1-207ENST00000560316 CCNB3Q8WWL7 1395 aa27.12■■□□□ 1.93
HERC1-207ENST00000560316 SCAF1Q9H7N4 1312 aaKnown RBP27.09■■□□□ 1.93
HERC1-207ENST00000560316 A2ML1A8K2U0 1454 aa27.08■■□□□ 1.93
HERC1-207ENST00000560316 ZNF644Q9H582 1327 aaPredicted RBP27.07■■□□□ 1.92
HERC1-207ENST00000560316 DNMT1P26358 1616 aaKnown RBP27.06■■□□□ 1.92
HERC1-207ENST00000560316 HSPA1LP34931 641 aa27.06■■□□□ 1.92
HERC1-207ENST00000560316 PIP4K2BP78356 416 aa27.06■■□□□ 1.92
HERC1-207ENST00000560316 ADGBQ8N7X0 1667 aa27.05■■□□□ 1.92
HERC1-207ENST00000560316 MTUS2Q5JR59 1369 aa27.02■■□□□ 1.92
HERC1-207ENST00000560316 FBXO31Q5XUX0 539 aaPredicted RBP27.01■■□□□ 1.91
HERC1-207ENST00000560316 MBD5Q9P267 1494 aa27■■□□□ 1.91
HERC1-207ENST00000560316 MED1Q15648 1581 aaPredicted RBP26.99■■□□□ 1.91
HERC1-207ENST00000560316 NEURL4Q96JN8 1562 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms