RNA–Protein interactions for RNA: ENST00000560212.1

TM2D3-210, Transcript of TM2 domain containing 3, humanhuman

TSL 3

Gene TM2D3, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-210ENST00000560212 ARID3CA6NKF2 412 aa13.74□□□□□ -0.21
TM2D3-210ENST00000560212 HSPA2P54652 639 aa13.74□□□□□ -0.21
TM2D3-210ENST00000560212 CDK11AQ9UQ88 783 aaPredicted RBP13.74□□□□□ -0.21
TM2D3-210ENST00000560212 PTPRTO14522 1441 aa13.73□□□□□ -0.21
TM2D3-210ENST00000560212 EFCAB2Q5VUJ9 269 aa13.73□□□□□ -0.21
TM2D3-210ENST00000560212 SCAPERQ9BY12 1400 aa13.73□□□□□ -0.21
TM2D3-210ENST00000560212 ZNF518AQ6AHZ1 1483 aa13.7□□□□□ -0.22
TM2D3-210ENST00000560212 REREQ9P2R6 1566 aa13.7□□□□□ -0.22
TM2D3-210ENST00000560212 HECW1Q76N89 1606 aa13.69□□□□□ -0.22
TM2D3-210ENST00000560212 UHRF1BP1Q6BDS2 1440 aa13.69□□□□□ -0.22
TM2D3-210ENST00000560212 PREX1Q8TCU6 1659 aa13.68□□□□□ -0.22
TM2D3-210ENST00000560212 FMN1Q68DA7 1419 aa13.66□□□□□ -0.22
TM2D3-210ENST00000560212 DISP3Q9P2K9 1392 aa13.66□□□□□ -0.22
TM2D3-210ENST00000560212 FER1L4A9Z1Z3 1794 aa13.66□□□□□ -0.22
TM2D3-210ENST00000560212 MLH3Q9UHC1 1453 aa13.65□□□□□ -0.22
TM2D3-210ENST00000560212 CNTLNQ9NXG0 1405 aa13.64□□□□□ -0.23
TM2D3-210ENST00000560212 AGLP35573 1532 aa13.64□□□□□ -0.23
TM2D3-210ENST00000560212 KDM5CP41229 1560 aa13.64□□□□□ -0.23
TM2D3-210ENST00000560212 TRAPPC8Q9Y2L5 1435 aa13.64□□□□□ -0.23
TM2D3-210ENST00000560212 SIGLEC1Q9BZZ2 1709 aa13.61□□□□□ -0.23
TM2D3-210ENST00000560212 MLECQ14165 292 aa13.61□□□□□ -0.23
TM2D3-210ENST00000560212 NPATQ14207 1427 aa13.61□□□□□ -0.23
TM2D3-210ENST00000560212 ILDR2Q71H61 639 aa13.6□□□□□ -0.23
TM2D3-210ENST00000560212 STRCQ7RTU9 1775 aa13.6□□□□□ -0.23
TM2D3-210ENST00000560212 CLIP1P30622 1438 aa13.59□□□□□ -0.23
TM2D3-210ENST00000560212 TROQ12816 1431 aaPredicted RBP13.59□□□□□ -0.23
TM2D3-210ENST00000560212 PPP6R1Q9UPN7 881 aa13.59□□□□□ -0.23
TM2D3-210ENST00000560212 ESF1Q9H501 851 aaKnown RBP13.58□□□□□ -0.24
TM2D3-210ENST00000560212 CEBPAP49715 358 aaPredicted RBP13.57□□□□□ -0.24
TM2D3-210ENST00000560212 AFAP1Q8N556 730 aa13.57□□□□□ -0.24
TM2D3-210ENST00000560212 NCOA1Q15788 1441 aa13.56□□□□□ -0.24
TM2D3-210ENST00000560212 LTBP4Q8N2S1 1624 aa13.56□□□□□ -0.24
TM2D3-210ENST00000560212 PKD2Q13563 968 aa13.55□□□□□ -0.24
TM2D3-210ENST00000560212 MYO5CQ9NQX4 1742 aa13.55□□□□□ -0.24
TM2D3-210ENST00000560212 CDK13Q14004 1512 aaKnown RBP13.54□□□□□ -0.24
TM2D3-210ENST00000560212 KIF14Q15058 1648 aa13.53□□□□□ -0.24
TM2D3-210ENST00000560212 CHIC1Q5VXU3 224 aa13.53□□□□□ -0.24
TM2D3-210ENST00000560212 PLPPR3Q6T4P5 718 aa13.53□□□□□ -0.24
TM2D3-210ENST00000560212 PLA2R1Q13018 1463 aa13.53□□□□□ -0.24
TM2D3-210ENST00000560212 DIP2CQ9Y2E4 1556 aa13.53□□□□□ -0.24
TM2D3-210ENST00000560212 ARHGAP5Q13017 1502 aa13.52□□□□□ -0.25
TM2D3-210ENST00000560212 SPATA31D1Q6ZQQ2 1576 aa13.51□□□□□ -0.25
TM2D3-210ENST00000560212 ZMYM3Q14202 1370 aa13.48□□□□□ -0.25
TM2D3-210ENST00000560212 C3P01024 1663 aa13.48□□□□□ -0.25
TM2D3-210ENST00000560212 CCDC18Q5T9S5 1454 aa13.48□□□□□ -0.25
TM2D3-210ENST00000560212 ARHGAP35Q9NRY4 1499 aa13.48□□□□□ -0.25
TM2D3-210ENST00000560212 KIAA1107Q9UPP5 1409 aa13.47□□□□□ -0.25
TM2D3-210ENST00000560212 MROH2AA6NES4 1674 aa13.47□□□□□ -0.25
TM2D3-210ENST00000560212 ABCC1P33527 1531 aa13.47□□□□□ -0.25
TM2D3-210ENST00000560212 RANGAP1P46060 587 aaPredicted RBP13.46□□□□□ -0.25
TM2D3-210ENST00000560212 MYT1LQ9UL68 1186 aa13.46□□□□□ -0.25
TM2D3-210ENST00000560212 TCOF1Q13428 1488 aaKnown RBP13.45□□□□□ -0.26
TM2D3-210ENST00000560212 PLEKHH2Q8IVE3 1493 aa13.44□□□□□ -0.26
TM2D3-210ENST00000560212 ABCA6Q8N139 1617 aa13.44□□□□□ -0.26
TM2D3-210ENST00000560212 CASKIN1Q8WXD9 1431 aa13.44□□□□□ -0.26
TM2D3-210ENST00000560212 UBTFP17480 764 aaKnown RBP13.43□□□□□ -0.26
TM2D3-210ENST00000560212 CAMSAP1Q5T5Y3 1602 aa13.42□□□□□ -0.26
TM2D3-210ENST00000560212 PREX2Q70Z35 1606 aa13.42□□□□□ -0.26
TM2D3-210ENST00000560212 ATP1B4Q9UN42 357 aaPredicted RBP13.42□□□□□ -0.26
TM2D3-210ENST00000560212 CDC42BPBQ9Y5S2 1711 aa13.42□□□□□ -0.26
TM2D3-210ENST00000560212 KIDINS220Q9ULH0 1771 aa13.41□□□□□ -0.26
TM2D3-210ENST00000560212 SPAG9O60271 1321 aaKnown RBP13.4□□□□□ -0.26
TM2D3-210ENST00000560212 UBAP1LF5GYI3 381 aa13.4□□□□□ -0.26
TM2D3-210ENST00000560212 PTPRKQ15262 1439 aa13.39□□□□□ -0.27
TM2D3-210ENST00000560212 FAM135AQ9P2D6 1515 aa13.39□□□□□ -0.27
TM2D3-210ENST00000560212 TOM1O60784 492 aa13.39□□□□□ -0.27
TM2D3-210ENST00000560212 ZNF142P52746 1687 aaPredicted RBP13.38□□□□□ -0.27
TM2D3-210ENST00000560212 ITSN2Q9NZM3 1697 aa13.38□□□□□ -0.27
TM2D3-210ENST00000560212 SAMD9LQ8IVG5 1584 aa13.38□□□□□ -0.27
TM2D3-210ENST00000560212 CPS1P31327 1500 aa13.38□□□□□ -0.27
TM2D3-210ENST00000560212 PLXNC1O60486 1568 aa13.37□□□□□ -0.27
TM2D3-210ENST00000560212 RTEL1-TNFRSF6BF6WH68 1400 aa13.37□□□□□ -0.27
TM2D3-210ENST00000560212 ZNF335Q9H4Z2 1342 aaPredicted RBP13.37□□□□□ -0.27
TM2D3-210ENST00000560212 NCKAP5LQ9HCH0 1330 aa13.36□□□□□ -0.27
TM2D3-210ENST00000560212 A2MP01023 1474 aa13.36□□□□□ -0.27
TM2D3-210ENST00000560212 GPATCH8Q9UKJ3 1502 aaKnown RBP13.35□□□□□ -0.27
TM2D3-210ENST00000560212 RSPH4AQ5TD94 716 aa13.35□□□□□ -0.27
TM2D3-210ENST00000560212 A2ML1A8K2U0 1454 aa13.35□□□□□ -0.27
TM2D3-210ENST00000560212 FYCO1Q9BQS8 1478 aa13.35□□□□□ -0.27
TM2D3-210ENST00000560212 CEP170BQ9Y4F5 1589 aaPredicted RBP13.34□□□□□ -0.27
TM2D3-210ENST00000560212 ATP7AQ04656 1500 aa13.33□□□□□ -0.28
TM2D3-210ENST00000560212 CFDP1Q9UEE9 299 aaPredicted RBP13.32□□□□□ -0.28
TM2D3-210ENST00000560212 THEMISQ8N1K5 641 aaPredicted RBP13.31□□□□□ -0.28
TM2D3-210ENST00000560212 DHX29Q7Z478 1369 aaKnown RBP13.31□□□□□ -0.28
TM2D3-210ENST00000560212 CDC42BPAQ5VT25 1732 aa13.3□□□□□ -0.28
TM2D3-210ENST00000560212 INO80Q9ULG1 1556 aaPredicted RBP13.3□□□□□ -0.28
TM2D3-210ENST00000560212 MYO3AQ8NEV4 1616 aa13.3□□□□□ -0.28
TM2D3-210ENST00000560212 MED14O60244 1454 aa13.29□□□□□ -0.28
TM2D3-210ENST00000560212 SHANK2Q9UPX8 1470 aa13.29□□□□□ -0.28
TM2D3-210ENST00000560212 HNRNPMP52272 730 aaKnown RBP eCLIP13.29□□□□□ -0.28
TM2D3-210ENST00000560212 ANKLE2Q86XL3 938 aa13.29□□□□□ -0.28
TM2D3-210ENST00000560212 SYCP2Q9BX26 1530 aa13.29□□□□□ -0.28
TM2D3-210ENST00000560212 GGT6Q6P531 493 aa13.28□□□□□ -0.28
TM2D3-210ENST00000560212 CCNB3Q8WWL7 1395 aa13.28□□□□□ -0.28
TM2D3-210ENST00000560212 NLRP1Q9C000 1473 aa13.28□□□□□ -0.28
TM2D3-210ENST00000560212 PZPP20742 1482 aa13.27□□□□□ -0.29
TM2D3-210ENST00000560212 DNMT1P26358 1616 aaKnown RBP13.27□□□□□ -0.29
TM2D3-210ENST00000560212 LRRIQ1Q96JM4 1722 aa13.27□□□□□ -0.29
TM2D3-210ENST00000560212 HSPA1LP34931 641 aa13.26□□□□□ -0.29
TM2D3-210ENST00000560212 ZNF777Q9ULD5 760 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms