RNA–Protein interactions for RNA: ENST00000560153.2

LINC00052-201, long intergenic non-protein coding RNA 52, humanhuman

TSL 2 BASIC

Gene LINC00052, Length 1,966 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052-201ENST00000560153 MTUS2Q5JR59 1369 aa16.18■□□□□ 0.18
LINC00052-201ENST00000560153 MYOM3Q5VTT5 1437 aa16.17■□□□□ 0.18
LINC00052-201ENST00000560153 GCC2Q8IWJ2 1684 aa16.17■□□□□ 0.18
LINC00052-201ENST00000560153 ATP1B4Q9UN42 357 aaPredicted RBP16.17■□□□□ 0.18
LINC00052-201ENST00000560153 HECW1Q76N89 1606 aa16.16■□□□□ 0.18
LINC00052-201ENST00000560153 PBRM1Q86U86 1689 aa16.15■□□□□ 0.18
LINC00052-201ENST00000560153 TRIM52Q96A61 297 aa16.15■□□□□ 0.18
LINC00052-201ENST00000560153 P3H3Q8IVL6 736 aa16.14■□□□□ 0.17
LINC00052-201ENST00000560153 NAIPQ13075 1403 aa16.14■□□□□ 0.17
LINC00052-201ENST00000560153 AKNAQ7Z591 1439 aa16.14■□□□□ 0.17
LINC00052-201ENST00000560153 MAGI1Q96QZ7 1491 aaPredicted RBP16.14■□□□□ 0.17
LINC00052-201ENST00000560153 NCOA2Q15596 1464 aa16.13■□□□□ 0.17
LINC00052-201ENST00000560153 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
LINC00052-201ENST00000560153 FANCIQ9NVI1 1328 aa16.12■□□□□ 0.17
LINC00052-201ENST00000560153 LRRIQ1Q96JM4 1722 aa16.12■□□□□ 0.17
LINC00052-201ENST00000560153 KDM5BQ9UGL1 1544 aa16.11■□□□□ 0.17
LINC00052-201ENST00000560153 ADAMTS12P58397 1594 aa16.1■□□□□ 0.17
LINC00052-201ENST00000560153 PDIA4P13667 645 aaKnown RBP16.1■□□□□ 0.17
LINC00052-201ENST00000560153 CHMP7Q8WUX9 453 aaPredicted RBP16.1■□□□□ 0.17
LINC00052-201ENST00000560153 CDK11AQ9UQ88 783 aaPredicted RBP16.1■□□□□ 0.17
LINC00052-201ENST00000560153 TCOF1Q13428 1488 aaKnown RBP16.1■□□□□ 0.17
LINC00052-201ENST00000560153 ARHGEF11O15085 1522 aa16.1■□□□□ 0.17
LINC00052-201ENST00000560153 UGGT2Q9NYU1 1516 aa16.1■□□□□ 0.17
LINC00052-201ENST00000560153 PTPRKQ15262 1439 aa16.09■□□□□ 0.17
LINC00052-201ENST00000560153 SYNJ2O15056 1496 aa16.08■□□□□ 0.17
LINC00052-201ENST00000560153 HIRIP3Q9BW71 556 aaPredicted RBP16.07■□□□□ 0.16
LINC00052-201ENST00000560153 BCL11AQ9H165 835 aa16.07■□□□□ 0.16
LINC00052-201ENST00000560153 CNTLNQ9NXG0 1405 aa16.06■□□□□ 0.16
LINC00052-201ENST00000560153 MYT1LQ9UL68 1186 aa16.06■□□□□ 0.16
LINC00052-201ENST00000560153 HNRNPUQ00839 825 aaKnown RBP eCLIP16.05■□□□□ 0.16
LINC00052-201ENST00000560153 POLR1AO95602 1720 aaPredicted RBP16.05■□□□□ 0.16
LINC00052-201ENST00000560153 GRIN2AQ12879 1464 aa16.04■□□□□ 0.16
LINC00052-201ENST00000560153 SAMD1Q6SPF0 538 aaPredicted RBP16.03■□□□□ 0.16
LINC00052-201ENST00000560153 IGSF3O75054 1194 aa16.02■□□□□ 0.16
LINC00052-201ENST00000560153 EIF4G2P78344 907 aaKnown RBP eCLIP16.02■□□□□ 0.16
LINC00052-201ENST00000560153 PPP4R2Q9NY27 417 aa16.02■□□□□ 0.15
LINC00052-201ENST00000560153 MIA2Q96PC5 1412 aa16.01■□□□□ 0.15
LINC00052-201ENST00000560153 HSPA5P11021 654 aaKnown RBP15.99■□□□□ 0.15
LINC00052-201ENST00000560153 WASHC2AQ641Q2 1341 aa15.98■□□□□ 0.15
LINC00052-201ENST00000560153 NUP160Q12769 1436 aa15.97■□□□□ 0.15
LINC00052-201ENST00000560153 NCOA1Q15788 1441 aa15.97■□□□□ 0.15
LINC00052-201ENST00000560153 ZBED9Q6R2W3 1325 aa15.94■□□□□ 0.14
LINC00052-201ENST00000560153 KIAA0586Q9BVV6 1533 aa15.93■□□□□ 0.14
LINC00052-201ENST00000560153 CNKSR2Q8WXI2 1034 aa15.93■□□□□ 0.14
LINC00052-201ENST00000560153 CCDC7Q96M83 1385 aa15.93■□□□□ 0.14
LINC00052-201ENST00000560153 MSH5O43196 834 aa15.92■□□□□ 0.14
LINC00052-201ENST00000560153 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
LINC00052-201ENST00000560153 MAGI3Q5TCQ9 1506 aa15.92■□□□□ 0.14
LINC00052-201ENST00000560153 DENND4BO75064 1496 aaPredicted RBP15.92■□□□□ 0.14
LINC00052-201ENST00000560153 ROCK1Q13464 1354 aa15.91■□□□□ 0.14
LINC00052-201ENST00000560153 UBE2Q2Q8WVN8 375 aa15.91■□□□□ 0.14
LINC00052-201ENST00000560153 RPRD2Q5VT52 1461 aaKnown RBP15.9■□□□□ 0.14
LINC00052-201ENST00000560153 CHD1O14646 1710 aa15.89■□□□□ 0.13
LINC00052-201ENST00000560153 PRKRIP1Q9H875 184 aaPredicted RBP15.89■□□□□ 0.13
LINC00052-201ENST00000560153 EPRSP07814 1512 aaKnown RBP15.88■□□□□ 0.13
LINC00052-201ENST00000560153 CDK11BP21127 795 aaKnown RBP15.88■□□□□ 0.13
LINC00052-201ENST00000560153 JPH4Q96JJ6 628 aa15.88■□□□□ 0.13
LINC00052-201ENST00000560153 MPHOSPH9Q99550 1183 aa15.88■□□□□ 0.13
LINC00052-201ENST00000560153 OSCARQ8IYS5 282 aa15.87■□□□□ 0.13
LINC00052-201ENST00000560153 RRP7BPQ9NSQ0 103 aa15.87■□□□□ 0.13
LINC00052-201ENST00000560153 IQGAP2Q13576 1575 aa15.87■□□□□ 0.13
LINC00052-201ENST00000560153 KDM6BO15054 1643 aa15.87■□□□□ 0.13
LINC00052-201ENST00000560153 DNMT1P26358 1616 aaKnown RBP15.87■□□□□ 0.13
LINC00052-201ENST00000560153 FOXD4L1Q9NU39 408 aa15.86■□□□□ 0.13
LINC00052-201ENST00000560153 TEX14Q8IWB6 1497 aa15.85■□□□□ 0.13
LINC00052-201ENST00000560153 DHX37Q8IY37 1157 aaKnown RBP15.85■□□□□ 0.13
LINC00052-201ENST00000560153 MRS2Q9HD23 443 aa15.84■□□□□ 0.13
LINC00052-201ENST00000560153 L3MBTL2Q969R5 705 aa15.84■□□□□ 0.13
LINC00052-201ENST00000560153 ANKRD30BQ9BXX2 1392 aa15.83■□□□□ 0.13
LINC00052-201ENST00000560153 IRX6P78412 446 aaPredicted RBP15.82■□□□□ 0.12
LINC00052-201ENST00000560153 NBR1Q14596 966 aa15.82■□□□□ 0.12
LINC00052-201ENST00000560153 PAXIP1Q6ZW49 1069 aaPredicted RBP15.82■□□□□ 0.12
LINC00052-201ENST00000560153 SMG6Q86US8 1419 aaKnown RBP15.82■□□□□ 0.12
LINC00052-201ENST00000560153 PPP4R3CPQ6ZMV5 832 aa15.82■□□□□ 0.12
LINC00052-201ENST00000560153 DAPK1P53355 1430 aa15.82■□□□□ 0.12
LINC00052-201ENST00000560153 SPATA31E1Q6ZUB1 1445 aa15.82■□□□□ 0.12
LINC00052-201ENST00000560153 ARID4BQ4LE39 1312 aaPredicted RBP15.8■□□□□ 0.12
LINC00052-201ENST00000560153 CHIC2Q9UKJ5 165 aa15.8■□□□□ 0.12
LINC00052-201ENST00000560153 CLASP1Q7Z460 1538 aa15.8■□□□□ 0.12
LINC00052-201ENST00000560153 ADGBQ8N7X0 1667 aa15.79■□□□□ 0.12
LINC00052-201ENST00000560153 FAM9BQ8IZU0 186 aa15.79■□□□□ 0.12
LINC00052-201ENST00000560153 CFAP44Q96MT7 982 aa15.77■□□□□ 0.12
LINC00052-201ENST00000560153 KIF14Q15058 1648 aa15.77■□□□□ 0.11
LINC00052-201ENST00000560153 KIF7Q2M1P5 1343 aa15.77■□□□□ 0.11
LINC00052-201ENST00000560153 DISP1Q96F81 1524 aa15.77■□□□□ 0.11
LINC00052-201ENST00000560153 ITSN2Q9NZM3 1697 aa15.76■□□□□ 0.11
LINC00052-201ENST00000560153 CDK13Q14004 1512 aaKnown RBP15.76■□□□□ 0.11
LINC00052-201ENST00000560153 CCDC184Q52MB2 194 aa15.75■□□□□ 0.11
LINC00052-201ENST00000560153 PRG4Q92954 1404 aaPredicted RBP15.75■□□□□ 0.11
LINC00052-201ENST00000560153 ROCK2O75116 1388 aaKnown RBP15.75■□□□□ 0.11
LINC00052-201ENST00000560153 ABCC5O15440 1437 aa15.74■□□□□ 0.11
LINC00052-201ENST00000560153 C11orf95C9JLR9 678 aaPredicted RBP15.74■□□□□ 0.11
LINC00052-201ENST00000560153 CCDC9Q9Y3X0 531 aaKnown RBP15.74■□□□□ 0.11
LINC00052-201ENST00000560153 MBD5Q9P267 1494 aa15.74■□□□□ 0.11
LINC00052-201ENST00000560153 CARMIL2Q6F5E8 1435 aa15.73■□□□□ 0.11
LINC00052-201ENST00000560153 NUDCQ9Y266 331 aa15.73■□□□□ 0.11
LINC00052-201ENST00000560153 RNF123Q5XPI4 1314 aa15.73■□□□□ 0.11
LINC00052-201ENST00000560153 TRHP20396 242 aaPredicted RBP15.73■□□□□ 0.11
LINC00052-201ENST00000560153 NBPF8Q3BBV2 869 aa15.73■□□□□ 0.11
LINC00052-201ENST00000560153 SHROOM2Q13796 1616 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms