RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 SAMD9Q5K651 1589 aa7.03□□□□□ -1.28
LRRC49-221ENST00000560107 CCDC7Q96M83 1385 aa7.03□□□□□ -1.28
LRRC49-221ENST00000560107 HECW1Q76N89 1606 aa7.03□□□□□ -1.28
LRRC49-221ENST00000560107 ZBED9Q6R2W3 1325 aa7.03□□□□□ -1.28
LRRC49-221ENST00000560107 MPHOSPH9Q99550 1183 aa7.03□□□□□ -1.28
LRRC49-221ENST00000560107 MAGI3Q5TCQ9 1506 aa7.03□□□□□ -1.28
LRRC49-221ENST00000560107 EHBP1L1Q8N3D4 1523 aa7.03□□□□□ -1.28
LRRC49-221ENST00000560107 UGGT2Q9NYU1 1516 aa7.03□□□□□ -1.28
LRRC49-221ENST00000560107 NCOA1Q15788 1441 aa7.02□□□□□ -1.28
LRRC49-221ENST00000560107 GCC2Q8IWJ2 1684 aa7.02□□□□□ -1.29
LRRC49-221ENST00000560107 ARHGEF11O15085 1522 aa7.01□□□□□ -1.29
LRRC49-221ENST00000560107 NBPF8Q3BBV2 869 aa7.01□□□□□ -1.29
LRRC49-221ENST00000560107 DEKP35659 375 aaKnown RBP7□□□□□ -1.29
LRRC49-221ENST00000560107 THOC2Q8NI27 1593 aaKnown RBP7□□□□□ -1.29
LRRC49-221ENST00000560107 TDRD9Q8NDG6 1382 aaKnown RBP7□□□□□ -1.29
LRRC49-221ENST00000560107 TCOF1Q13428 1488 aaKnown RBP7□□□□□ -1.29
LRRC49-221ENST00000560107 NESP48681 1621 aa7□□□□□ -1.29
LRRC49-221ENST00000560107 ANO8Q9HCE9 1232 aaPredicted RBP7□□□□□ -1.29
LRRC49-221ENST00000560107 CNGB1Q14028 1251 aaPredicted RBP6.99□□□□□ -1.29
LRRC49-221ENST00000560107 KIF7Q2M1P5 1343 aa6.99□□□□□ -1.29
LRRC49-221ENST00000560107 PAK3O75914 559 aaPredicted RBP6.99□□□□□ -1.29
LRRC49-221ENST00000560107 AKNAQ7Z591 1439 aa6.99□□□□□ -1.29
LRRC49-221ENST00000560107 MYT1LQ9UL68 1186 aa6.99□□□□□ -1.29
LRRC49-221ENST00000560107 NOP58Q9Y2X3 529 aaKnown RBP6.99□□□□□ -1.29
LRRC49-221ENST00000560107 NBR1Q14596 966 aa6.98□□□□□ -1.29
LRRC49-221ENST00000560107 ANKRD30BQ9BXX2 1392 aa6.97□□□□□ -1.29
LRRC49-221ENST00000560107 SENP3-EIF4A1A0A087X0R7 540 aa6.97□□□□□ -1.29
LRRC49-221ENST00000560107 ARID3CA6NKF2 412 aa6.97□□□□□ -1.29
LRRC49-221ENST00000560107 HOMEZQ8IX15 550 aa6.97□□□□□ -1.29
LRRC49-221ENST00000560107 PKNOX2Q96KN3 472 aa6.97□□□□□ -1.29
LRRC49-221ENST00000560107 SPATA31E1Q6ZUB1 1445 aa6.97□□□□□ -1.29
LRRC49-221ENST00000560107 RPRD2Q5VT52 1461 aaKnown RBP6.97□□□□□ -1.29
LRRC49-221ENST00000560107 ABCA5Q8WWZ7 1642 aa6.97□□□□□ -1.29
LRRC49-221ENST00000560107 URB2Q14146 1524 aaKnown RBP6.97□□□□□ -1.29
LRRC49-221ENST00000560107 GAPVD1Q14C86 1478 aa6.96□□□□□ -1.29
LRRC49-221ENST00000560107 TEX14Q8IWB6 1497 aa6.96□□□□□ -1.29
LRRC49-221ENST00000560107 SMG6Q86US8 1419 aaKnown RBP6.96□□□□□ -1.29
LRRC49-221ENST00000560107 POLR1AO95602 1720 aaPredicted RBP6.96□□□□□ -1.3
LRRC49-221ENST00000560107 PDIA4P13667 645 aaKnown RBP6.96□□□□□ -1.3
LRRC49-221ENST00000560107 KIF21AQ7Z4S6 1674 aa6.96□□□□□ -1.3
LRRC49-221ENST00000560107 CDK13Q14004 1512 aaKnown RBP6.96□□□□□ -1.3
LRRC49-221ENST00000560107 POLR3GLQ9BT43 218 aa6.95□□□□□ -1.3
LRRC49-221ENST00000560107 NUDCQ9Y266 331 aa6.95□□□□□ -1.3
LRRC49-221ENST00000560107 EPRSP07814 1512 aaKnown RBP6.95□□□□□ -1.3
LRRC49-221ENST00000560107 LAMC3Q9Y6N6 1575 aa6.95□□□□□ -1.3
LRRC49-221ENST00000560107 MIA2Q96PC5 1412 aa6.95□□□□□ -1.3
LRRC49-221ENST00000560107 CCDC136Q96JN2 1154 aa6.95□□□□□ -1.3
LRRC49-221ENST00000560107 SLC4A1APQ9BWU0 796 aaKnown RBP6.95□□□□□ -1.3
LRRC49-221ENST00000560107 AMER1Q5JTC6 1135 aaPredicted RBP6.94□□□□□ -1.3
LRRC49-221ENST00000560107 DHX29Q7Z478 1369 aaKnown RBP6.94□□□□□ -1.3
LRRC49-221ENST00000560107 PPP6R1Q9UPN7 881 aa6.94□□□□□ -1.3
LRRC49-221ENST00000560107 RNF123Q5XPI4 1314 aa6.94□□□□□ -1.3
LRRC49-221ENST00000560107 DAPK1P53355 1430 aa6.93□□□□□ -1.3
LRRC49-221ENST00000560107 IPO9Q96P70 1041 aaKnown RBP6.93□□□□□ -1.3
LRRC49-221ENST00000560107 ZNF644Q9H582 1327 aaPredicted RBP6.93□□□□□ -1.3
LRRC49-221ENST00000560107 BCORL1Q5H9F3 1711 aa6.93□□□□□ -1.3
LRRC49-221ENST00000560107 ANP32AP39687 249 aaKnown RBP6.92□□□□□ -1.3
LRRC49-221ENST00000560107 ABCC5O15440 1437 aa6.92□□□□□ -1.3
LRRC49-221ENST00000560107 ADRA2BP18089 450 aa6.92□□□□□ -1.3
LRRC49-221ENST00000560107 ROCK1Q13464 1354 aa6.92□□□□□ -1.3
LRRC49-221ENST00000560107 ZNF326Q5BKZ1 582 aaKnown RBP6.92□□□□□ -1.3
LRRC49-221ENST00000560107 PNISRQ8TF01 805 aaKnown RBP6.91□□□□□ -1.3
LRRC49-221ENST00000560107 ZBTB47Q9UFB7 747 aaPredicted RBP6.91□□□□□ -1.3
LRRC49-221ENST00000560107 WDR62O43379 1518 aa6.91□□□□□ -1.3
LRRC49-221ENST00000560107 USP47Q96K76 1375 aa6.91□□□□□ -1.3
LRRC49-221ENST00000560107 DNMT1P26358 1616 aaKnown RBP6.91□□□□□ -1.3
LRRC49-221ENST00000560107 PDE4CQ08493 712 aa6.9□□□□□ -1.3
LRRC49-221ENST00000560107 PZPP20742 1482 aa6.9□□□□□ -1.3
LRRC49-221ENST00000560107 IQGAP2Q13576 1575 aa6.9□□□□□ -1.31
LRRC49-221ENST00000560107 TMC1Q8TDI8 760 aa6.9□□□□□ -1.31
LRRC49-221ENST00000560107 MBD5Q9P267 1494 aa6.89□□□□□ -1.31
LRRC49-221ENST00000560107 RTL5Q5HYW3 569 aaPredicted RBP6.88□□□□□ -1.31
LRRC49-221ENST00000560107 TARBP1Q13395 1621 aaKnown RBP6.88□□□□□ -1.31
LRRC49-221ENST00000560107 KDM5CP41229 1560 aa6.88□□□□□ -1.31
LRRC49-221ENST00000560107 NPM2Q86SE8 214 aaKnown RBP6.88□□□□□ -1.31
LRRC49-221ENST00000560107 EXOC6Q8TAG9 804 aa6.87□□□□□ -1.31
LRRC49-221ENST00000560107 PBRM1Q86U86 1689 aa6.87□□□□□ -1.31
LRRC49-221ENST00000560107 KIF14Q15058 1648 aa6.87□□□□□ -1.31
LRRC49-221ENST00000560107 PKD2Q13563 968 aa6.87□□□□□ -1.31
LRRC49-221ENST00000560107 ARID4BQ4LE39 1312 aaPredicted RBP6.87□□□□□ -1.31
LRRC49-221ENST00000560107 KIAA1107Q9UPP5 1409 aa6.87□□□□□ -1.31
LRRC49-221ENST00000560107 RRP1P56182 461 aaKnown RBP6.86□□□□□ -1.31
LRRC49-221ENST00000560107 SALL2Q9Y467 1007 aaPredicted RBP6.86□□□□□ -1.31
LRRC49-221ENST00000560107 LRPPRCP42704 1394 aaKnown RBP6.86□□□□□ -1.31
LRRC49-221ENST00000560107 CARD11Q9BXL7 1154 aa6.85□□□□□ -1.31
LRRC49-221ENST00000560107 PDS5BQ9NTI5 1447 aa6.85□□□□□ -1.31
LRRC49-221ENST00000560107 KIF15Q9NS87 1388 aa6.85□□□□□ -1.31
LRRC49-221ENST00000560107 ZNF777Q9ULD5 760 aaPredicted RBP6.85□□□□□ -1.31
LRRC49-221ENST00000560107 NUP153P49790 1475 aaKnown RBP6.85□□□□□ -1.31
LRRC49-221ENST00000560107 ROCK2O75116 1388 aaKnown RBP6.85□□□□□ -1.31
LRRC49-221ENST00000560107 PDE4AP27815 886 aa6.85□□□□□ -1.31
LRRC49-221ENST00000560107 CFDP1Q9UEE9 299 aaPredicted RBP6.85□□□□□ -1.31
LRRC49-221ENST00000560107 RCAN3Q9UKA8 241 aa6.85□□□□□ -1.31
LRRC49-221ENST00000560107 TAOK2Q9UL54 1235 aa6.85□□□□□ -1.31
LRRC49-221ENST00000560107 ADAMTS12P58397 1594 aa6.84□□□□□ -1.31
LRRC49-221ENST00000560107 MYBBP1AQ9BQG0 1328 aaKnown RBP6.84□□□□□ -1.31
LRRC49-221ENST00000560107 CAMSAP2Q08AD1 1489 aa6.84□□□□□ -1.31
LRRC49-221ENST00000560107 ST20-MTHFSA0A0A6YYL1 179 aa6.84□□□□□ -1.31
LRRC49-221ENST00000560107 TCERG1O14776 1098 aaKnown RBP6.84□□□□□ -1.31
LRRC49-221ENST00000560107 LAS1LQ9Y4W2 734 aaKnown RBP6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms