RNA–Protein interactions for RNA: ENST00000558964.5

NEO1-206, Transcript of neogenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEO1, Length 4,441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-206ENST00000558964 AQRO60306 1485 aaKnown RBP eCLIP21.68■■□□□ 1.06
NEO1-206ENST00000558964 MYH16Q9H6N6 1097 aa21.66■■□□□ 1.06
NEO1-206ENST00000558964 LAS1LQ9Y4W2 734 aaKnown RBP21.66■■□□□ 1.06
NEO1-206ENST00000558964 SOX12O15370 315 aa21.65■■□□□ 1.06
NEO1-206ENST00000558964 OSCARQ8IYS5 282 aa21.65■■□□□ 1.06
NEO1-206ENST00000558964 WASHC2CQ9Y4E1 1318 aa21.62■■□□□ 1.05
NEO1-206ENST00000558964 ROCK2O75116 1388 aaKnown RBP21.61■■□□□ 1.05
NEO1-206ENST00000558964 NESP48681 1621 aa21.6■■□□□ 1.05
NEO1-206ENST00000558964 MORC1Q86VD1 984 aa21.6■■□□□ 1.05
NEO1-206ENST00000558964 CFTRP13569 1480 aa21.6■■□□□ 1.05
NEO1-206ENST00000558964 NUTM2DQ5VT03 806 aaPredicted RBP21.57■■□□□ 1.04
NEO1-206ENST00000558964 FRAT1Q92837 279 aaPredicted RBP21.56■■□□□ 1.04
NEO1-206ENST00000558964 CCER2I3L3R5 266 aa21.56■■□□□ 1.04
NEO1-206ENST00000558964 DHX57Q6P158 1386 aaKnown RBP21.55■■□□□ 1.04
NEO1-206ENST00000558964 FTSJ3Q8IY81 847 aaKnown RBP21.55■■□□□ 1.04
NEO1-206ENST00000558964 ZNF644Q9H582 1327 aaPredicted RBP21.53■■□□□ 1.04
NEO1-206ENST00000558964 ARXQ96QS3 562 aa21.52■■□□□ 1.04
NEO1-206ENST00000558964 KTN1Q86UP2 1357 aaKnown RBP21.48■■□□□ 1.03
NEO1-206ENST00000558964 HDGFL2Q7Z4V5 671 aaPredicted RBP21.47■■□□□ 1.03
NEO1-206ENST00000558964 SYNJ1O43426 1573 aa21.45■■□□□ 1.02
NEO1-206ENST00000558964 DNAJC5BQ9UF47 199 aa21.44■■□□□ 1.02
NEO1-206ENST00000558964 ST20-MTHFSA0A0A6YYL1 179 aa21.44■■□□□ 1.02
NEO1-206ENST00000558964 PPP4R2Q9NY27 417 aa21.44■■□□□ 1.02
NEO1-206ENST00000558964 CC2D2AQ9P2K1 1620 aa21.43■■□□□ 1.02
NEO1-206ENST00000558964 TRAK1Q9UPV9 953 aa21.43■■□□□ 1.02
NEO1-206ENST00000558964 NBR1Q14596 966 aa21.43■■□□□ 1.02
NEO1-206ENST00000558964 KIF21BO75037 1637 aa21.43■■□□□ 1.02
NEO1-206ENST00000558964 PHLDB1Q86UU1 1377 aa21.43■■□□□ 1.02
NEO1-206ENST00000558964 PNNQ9H307 717 aaKnown RBP21.42■■□□□ 1.02
NEO1-206ENST00000558964 GRIN2BQ13224 1484 aa21.42■■□□□ 1.02
NEO1-206ENST00000558964 B4GALNT3Q6L9W6 998 aa21.42■■□□□ 1.02
NEO1-206ENST00000558964 CCDC144AA2RUR9 1427 aa21.41■■□□□ 1.02
NEO1-206ENST00000558964 RGS3P49796 1198 aa21.41■■□□□ 1.02
NEO1-206ENST00000558964 U2AF1L5P0DN76 240 aaPredicted RBP21.4■■□□□ 1.02
NEO1-206ENST00000558964 U2AF1Q01081 240 aaKnown RBP eCLIP21.4■■□□□ 1.02
NEO1-206ENST00000558964 RALBP1Q15311 655 aa21.39■■□□□ 1.01
NEO1-206ENST00000558964 FGD6Q6ZV73 1430 aa21.39■■□□□ 1.01
NEO1-206ENST00000558964 PAK3O75914 559 aaPredicted RBP21.39■■□□□ 1.01
NEO1-206ENST00000558964 MYOM3Q5VTT5 1437 aa21.38■■□□□ 1.01
NEO1-206ENST00000558964 ARAP1Q96P48 1450 aa21.36■■□□□ 1.01
NEO1-206ENST00000558964 EID1Q9Y6B2 187 aa21.35■■□□□ 1.01
NEO1-206ENST00000558964 HMGXB3Q12766 1538 aa21.35■■□□□ 1.01
NEO1-206ENST00000558964 NUTM2FA1L443 756 aa21.35■■□□□ 1.01
NEO1-206ENST00000558964 TOPBP1Q92547 1522 aa21.35■■□□□ 1.01
NEO1-206ENST00000558964 EIF3AQ14152 1382 aaKnown RBP21.34■■□□□ 1.01
NEO1-206ENST00000558964 POLA1P09884 1462 aaPredicted RBP21.34■■□□□ 1.01
NEO1-206ENST00000558964 FAM69CQ0P6D2 419 aa21.33■■□□□ 1.01
NEO1-206ENST00000558964 LRRC9Q6ZRR7 1453 aa21.33■■□□□ 1.01
NEO1-206ENST00000558964 TERF2IPQ9NYB0 399 aa21.32■■□□□ 1
NEO1-206ENST00000558964 CUX1P39880 1505 aa21.31■■□□□ 1
NEO1-206ENST00000558964 CASKIN1Q8WXD9 1431 aa21.31■■□□□ 1
NEO1-206ENST00000558964 ANP32BQ92688 251 aaKnown RBP21.3■■□□□ 1
NEO1-206ENST00000558964 PRXQ9BXM0 1461 aa21.3■■□□□ 1
NEO1-206ENST00000558964 MRC2Q9UBG0 1479 aa21.3■■□□□ 1
NEO1-206ENST00000558964 KIF15Q9NS87 1388 aa21.3■■□□□ 1
NEO1-206ENST00000558964 NLRP13Q86W25 1043 aa21.3■■□□□ 1
NEO1-206ENST00000558964 MS4A1P11836 297 aa21.29■■□□□ 1
NEO1-206ENST00000558964 AFAP1Q8N556 730 aa21.29■■□□□ 1
NEO1-206ENST00000558964 BICRAQ9NZM4 1560 aa21.28■■□□□ 1
NEO1-206ENST00000558964 VGFO15240 615 aaPredicted RBP21.28■■□□□ 1
NEO1-206ENST00000558964 RTF1Q92541 710 aaKnown RBP21.27■■□□□ 1
NEO1-206ENST00000558964 ERICH3Q5RHP9 1530 aa21.26■□□□□ 0.99
NEO1-206ENST00000558964 PRG4Q92954 1404 aaPredicted RBP21.26■□□□□ 0.99
NEO1-206ENST00000558964 PANK3Q9H999 370 aa21.26■□□□□ 0.99
NEO1-206ENST00000558964 NCOA2Q15596 1464 aa21.26■□□□□ 0.99
NEO1-206ENST00000558964 NGDNQ8NEJ9 315 aaKnown RBP21.25■□□□□ 0.99
NEO1-206ENST00000558964 BECN1Q14457 450 aa21.25■□□□□ 0.99
NEO1-206ENST00000558964 CHMP4BQ9H444 224 aaKnown RBP21.24■□□□□ 0.99
NEO1-206ENST00000558964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.23■□□□□ 0.99
NEO1-206ENST00000558964 TOP2BQ02880 1626 aa21.23■□□□□ 0.99
NEO1-206ENST00000558964 IFT140Q96RY7 1462 aa21.22■□□□□ 0.99
NEO1-206ENST00000558964 RCAN3Q9UKA8 241 aa21.22■□□□□ 0.99
NEO1-206ENST00000558964 USP47Q96K76 1375 aa21.21■□□□□ 0.99
NEO1-206ENST00000558964 PRDM2Q13029 1718 aa21.21■□□□□ 0.99
NEO1-206ENST00000558964 DDRGK1Q96HY6 314 aa21.21■□□□□ 0.99
NEO1-206ENST00000558964 ANKRD50Q9ULJ7 1429 aa21.21■□□□□ 0.99
NEO1-206ENST00000558964 CCDC146Q8IYE0 955 aa21.2■□□□□ 0.98
NEO1-206ENST00000558964 CSB-PGBD3P0DP91 1061 aa21.18■□□□□ 0.98
NEO1-206ENST00000558964 OS9Q13438 667 aaPredicted RBP21.18■□□□□ 0.98
NEO1-206ENST00000558964 PRKRIP1Q9H875 184 aaPredicted RBP21.17■□□□□ 0.98
NEO1-206ENST00000558964 FYCO1Q9BQS8 1478 aa21.17■□□□□ 0.98
NEO1-206ENST00000558964 MINK1Q8N4C8 1332 aaPredicted RBP21.16■□□□□ 0.98
NEO1-206ENST00000558964 UACAQ9BZF9 1416 aa21.16■□□□□ 0.98
NEO1-206ENST00000558964 CASC1Q6TDU7 716 aa21.15■□□□□ 0.98
NEO1-206ENST00000558964 SYNJ2O15056 1496 aa21.14■□□□□ 0.97
NEO1-206ENST00000558964 GOLGA2Q08379 1002 aa21.13■□□□□ 0.97
NEO1-206ENST00000558964 SNAPC4Q5SXM2 1469 aa21.13■□□□□ 0.97
NEO1-206ENST00000558964 IPO8O15397 1037 aaKnown RBP21.12■□□□□ 0.97
NEO1-206ENST00000558964 LTV1Q96GA3 475 aaPredicted RBP21.11■□□□□ 0.97
NEO1-206ENST00000558964 NPHP1O15259 732 aa21.11■□□□□ 0.97
NEO1-206ENST00000558964 CALD1Q05682 793 aaKnown RBP21.11■□□□□ 0.97
NEO1-206ENST00000558964 AMPHP49418 695 aa21.11■□□□□ 0.97
NEO1-206ENST00000558964 EVC2Q86UK5 1308 aa21.1■□□□□ 0.97
NEO1-206ENST00000558964 MYBBP1AQ9BQG0 1328 aaKnown RBP21.1■□□□□ 0.97
NEO1-206ENST00000558964 DNMBPQ6XZF7 1577 aa21.09■□□□□ 0.97
NEO1-206ENST00000558964 RRP7AQ9Y3A4 280 aaKnown RBP21.08■□□□□ 0.97
NEO1-206ENST00000558964 APBB1O00213 710 aa21.07■□□□□ 0.96
NEO1-206ENST00000558964 CLUAP1Q96AJ1 413 aa21.07■□□□□ 0.96
NEO1-206ENST00000558964 RRBP1Q9P2E9 1410 aaKnown RBP21.05■□□□□ 0.96
NEO1-206ENST00000558964 ARHGAP5Q13017 1502 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms