RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 AKNAQ7Z591 1439 aa25.18■■□□□ 1.62
LINC01220-201ENST00000558575 EFCAB5A4FU69 1503 aa25.17■■□□□ 1.62
LINC01220-201ENST00000558575 NUP153P49790 1475 aaKnown RBP25.15■■□□□ 1.62
LINC01220-201ENST00000558575 HECW1Q76N89 1606 aa25.14■■□□□ 1.61
LINC01220-201ENST00000558575 ARHGAP35Q9NRY4 1499 aa25.12■■□□□ 1.61
LINC01220-201ENST00000558575 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.12■■□□□ 1.61
LINC01220-201ENST00000558575 ARHGEF12Q9NZN5 1544 aa25.12■■□□□ 1.61
LINC01220-201ENST00000558575 MLECQ14165 292 aa25.09■■□□□ 1.61
LINC01220-201ENST00000558575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.08■■□□□ 1.61
LINC01220-201ENST00000558575 HNRNPUL2Q1KMD3 747 aaKnown RBP25.08■■□□□ 1.61
LINC01220-201ENST00000558575 MAGI2Q86UL8 1455 aa25.07■■□□□ 1.6
LINC01220-201ENST00000558575 SETD1BQ9UPS6 1966 aaKnown RBP25.04■■□□□ 1.6
LINC01220-201ENST00000558575 CLIP1P30622 1438 aa25.02■■□□□ 1.6
LINC01220-201ENST00000558575 CEBPAP49715 358 aaPredicted RBP24.98■■□□□ 1.59
LINC01220-201ENST00000558575 LTBP4Q8N2S1 1624 aa24.97■■□□□ 1.59
LINC01220-201ENST00000558575 CEP162Q5TB80 1403 aa24.95■■□□□ 1.59
LINC01220-201ENST00000558575 C3P01024 1663 aa24.95■■□□□ 1.58
LINC01220-201ENST00000558575 ATP10AO60312 1499 aa24.95■■□□□ 1.58
LINC01220-201ENST00000558575 DMRT2Q9Y5R5 561 aa24.94■■□□□ 1.58
LINC01220-201ENST00000558575 C9orf84Q5VXU9 1444 aa24.94■■□□□ 1.58
LINC01220-201ENST00000558575 PLEKHD1A6NEE1 506 aa24.93■■□□□ 1.58
LINC01220-201ENST00000558575 UHRF1BP1Q6BDS2 1440 aa24.93■■□□□ 1.58
LINC01220-201ENST00000558575 SCAPERQ9BY12 1400 aa24.92■■□□□ 1.58
LINC01220-201ENST00000558575 PTPRTO14522 1441 aa24.91■■□□□ 1.58
LINC01220-201ENST00000558575 MYO5CQ9NQX4 1742 aa24.91■■□□□ 1.58
LINC01220-201ENST00000558575 FMN1Q68DA7 1419 aa24.9■■□□□ 1.58
LINC01220-201ENST00000558575 CDK13Q14004 1512 aaKnown RBP24.87■■□□□ 1.57
LINC01220-201ENST00000558575 IQSEC2Q5JU85 1478 aa24.87■■□□□ 1.57
LINC01220-201ENST00000558575 PLCH2O75038 1416 aa24.85■■□□□ 1.57
LINC01220-201ENST00000558575 DIP2CQ9Y2E4 1556 aa24.82■■□□□ 1.56
LINC01220-201ENST00000558575 KDM5CP41229 1560 aa24.81■■□□□ 1.56
LINC01220-201ENST00000558575 ATP1B4Q9UN42 357 aaPredicted RBP24.81■■□□□ 1.56
LINC01220-201ENST00000558575 ABCA6Q8N139 1617 aa24.79■■□□□ 1.56
LINC01220-201ENST00000558575 REREQ9P2R6 1566 aa24.78■■□□□ 1.56
LINC01220-201ENST00000558575 CASKIN1Q8WXD9 1431 aa24.78■■□□□ 1.56
LINC01220-201ENST00000558575 KIF14Q15058 1648 aa24.76■■□□□ 1.55
LINC01220-201ENST00000558575 NCOA1Q15788 1441 aa24.76■■□□□ 1.55
LINC01220-201ENST00000558575 ZNF518AQ6AHZ1 1483 aa24.74■■□□□ 1.55
LINC01220-201ENST00000558575 CAMSAP1Q5T5Y3 1602 aa24.7■■□□□ 1.54
LINC01220-201ENST00000558575 CDC42BPBQ9Y5S2 1711 aa24.69■■□□□ 1.54
LINC01220-201ENST00000558575 TRAPPC8Q9Y2L5 1435 aa24.68■■□□□ 1.54
LINC01220-201ENST00000558575 FYCO1Q9BQS8 1478 aa24.67■■□□□ 1.54
LINC01220-201ENST00000558575 EFCAB2Q5VUJ9 269 aa24.67■■□□□ 1.54
LINC01220-201ENST00000558575 SUPT6HQ7KZ85 1726 aaKnown RBP24.66■■□□□ 1.54
LINC01220-201ENST00000558575 AGLP35573 1532 aa24.66■■□□□ 1.54
LINC01220-201ENST00000558575 AFAP1Q8N556 730 aa24.65■■□□□ 1.54
LINC01220-201ENST00000558575 MROH2AA6NES4 1674 aa24.65■■□□□ 1.54
LINC01220-201ENST00000558575 ARHGAP5Q13017 1502 aa24.65■■□□□ 1.54
LINC01220-201ENST00000558575 LRRIQ1Q96JM4 1722 aa24.64■■□□□ 1.54
LINC01220-201ENST00000558575 VPS8Q8N3P4 1428 aa24.63■■□□□ 1.53
LINC01220-201ENST00000558575 MED1Q15648 1581 aaPredicted RBP24.63■■□□□ 1.53
LINC01220-201ENST00000558575 ITSN2Q9NZM3 1697 aa24.62■■□□□ 1.53
LINC01220-201ENST00000558575 KIDINS220Q9ULH0 1771 aa24.62■■□□□ 1.53
LINC01220-201ENST00000558575 MLH3Q9UHC1 1453 aa24.61■■□□□ 1.53
LINC01220-201ENST00000558575 ZNF142P52746 1687 aaPredicted RBP24.61■■□□□ 1.53
LINC01220-201ENST00000558575 ZNF335Q9H4Z2 1342 aaPredicted RBP24.61■■□□□ 1.53
LINC01220-201ENST00000558575 UBAP1LF5GYI3 381 aa24.59■■□□□ 1.53
LINC01220-201ENST00000558575 CDK11AQ9UQ88 783 aaPredicted RBP24.59■■□□□ 1.53
LINC01220-201ENST00000558575 CCDC18Q5T9S5 1454 aa24.58■■□□□ 1.52
LINC01220-201ENST00000558575 MYO3AQ8NEV4 1616 aa24.57■■□□□ 1.52
LINC01220-201ENST00000558575 MYT1LQ9UL68 1186 aa24.56■■□□□ 1.52
LINC01220-201ENST00000558575 PREX2Q70Z35 1606 aa24.56■■□□□ 1.52
LINC01220-201ENST00000558575 ABCC1P33527 1531 aa24.56■■□□□ 1.52
LINC01220-201ENST00000558575 NCKAP5LQ9HCH0 1330 aa24.54■■□□□ 1.52
LINC01220-201ENST00000558575 TROQ12816 1431 aaPredicted RBP24.53■■□□□ 1.52
LINC01220-201ENST00000558575 CNTLNQ9NXG0 1405 aa24.53■■□□□ 1.52
LINC01220-201ENST00000558575 NPATQ14207 1427 aa24.52■■□□□ 1.52
LINC01220-201ENST00000558575 ESF1Q9H501 851 aaKnown RBP24.52■■□□□ 1.52
LINC01220-201ENST00000558575 CLTCQ00610 1675 aaKnown RBP24.52■■□□□ 1.52
LINC01220-201ENST00000558575 CDC42BPAQ5VT25 1732 aa24.48■■□□□ 1.51
LINC01220-201ENST00000558575 CEP170BQ9Y4F5 1589 aaPredicted RBP24.47■■□□□ 1.51
LINC01220-201ENST00000558575 PLA2R1Q13018 1463 aa24.47■■□□□ 1.51
LINC01220-201ENST00000558575 TCOF1Q13428 1488 aaKnown RBP24.47■■□□□ 1.51
LINC01220-201ENST00000558575 HSPA1LP34931 641 aa24.43■■□□□ 1.5
LINC01220-201ENST00000558575 ZMYM3Q14202 1370 aa24.42■■□□□ 1.5
LINC01220-201ENST00000558575 POLR1AO95602 1720 aaPredicted RBP24.42■■□□□ 1.5
LINC01220-201ENST00000558575 KANK4Q5T7N3 995 aaPredicted RBP24.42■■□□□ 1.5
LINC01220-201ENST00000558575 SAMD9LQ8IVG5 1584 aa24.41■■□□□ 1.5
LINC01220-201ENST00000558575 MTUS2Q5JR59 1369 aa24.4■■□□□ 1.5
LINC01220-201ENST00000558575 TIAM1Q13009 1591 aa24.38■■□□□ 1.49
LINC01220-201ENST00000558575 MAP3K1Q13233 1512 aa24.37■■□□□ 1.49
LINC01220-201ENST00000558575 PKD2Q13563 968 aa24.37■■□□□ 1.49
LINC01220-201ENST00000558575 PTPRKQ15262 1439 aa24.36■■□□□ 1.49
LINC01220-201ENST00000558575 PLXNC1O60486 1568 aa24.36■■□□□ 1.49
LINC01220-201ENST00000558575 ALKQ9UM73 1620 aa24.35■■□□□ 1.49
LINC01220-201ENST00000558575 SCAF1Q9H7N4 1312 aaKnown RBP24.35■■□□□ 1.49
LINC01220-201ENST00000558575 DNMT1P26358 1616 aaKnown RBP24.34■■□□□ 1.49
LINC01220-201ENST00000558575 NEURL4Q96JN8 1562 aa24.33■■□□□ 1.49
LINC01220-201ENST00000558575 LRRC9Q6ZRR7 1453 aa24.33■■□□□ 1.49
LINC01220-201ENST00000558575 PIP4K2BP78356 416 aa24.33■■□□□ 1.49
LINC01220-201ENST00000558575 PPP6R1Q9UPN7 881 aa24.32■■□□□ 1.48
LINC01220-201ENST00000558575 APLP2Q06481 763 aa24.31■■□□□ 1.48
LINC01220-201ENST00000558575 INO80Q9ULG1 1556 aaPredicted RBP24.31■■□□□ 1.48
LINC01220-201ENST00000558575 CPS1P31327 1500 aa24.3■■□□□ 1.48
LINC01220-201ENST00000558575 EHBP1L1Q8N3D4 1523 aa24.3■■□□□ 1.48
LINC01220-201ENST00000558575 SYCP2Q9BX26 1530 aa24.3■■□□□ 1.48
LINC01220-201ENST00000558575 ATP7AQ04656 1500 aa24.29■■□□□ 1.48
LINC01220-201ENST00000558575 GPATCH8Q9UKJ3 1502 aaKnown RBP24.27■■□□□ 1.48
LINC01220-201ENST00000558575 A2ML1A8K2U0 1454 aa24.26■■□□□ 1.47
LINC01220-201ENST00000558575 SHANK2Q9UPX8 1470 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms