RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 CDK13Q14004 1512 aaKnown RBP21.83■■□□□ 1.09
TMED3-205ENST00000558562 SCAPERQ9BY12 1400 aa21.82■■□□□ 1.08
TMED3-205ENST00000558562 CEBPAP49715 358 aaPredicted RBP21.79■■□□□ 1.08
TMED3-205ENST00000558562 PLCH2O75038 1416 aa21.78■■□□□ 1.08
TMED3-205ENST00000558562 EEA1Q15075 1411 aa21.77■■□□□ 1.08
TMED3-205ENST00000558562 ATP10AO60312 1499 aa21.76■■□□□ 1.07
TMED3-205ENST00000558562 ARHGEF12Q9NZN5 1544 aa21.75■■□□□ 1.07
TMED3-205ENST00000558562 ATP1B4Q9UN42 357 aaPredicted RBP21.75■■□□□ 1.07
TMED3-205ENST00000558562 C9orf84Q5VXU9 1444 aa21.73■■□□□ 1.07
TMED3-205ENST00000558562 PREX1Q8TCU6 1659 aa21.73■■□□□ 1.07
TMED3-205ENST00000558562 LOC105371045A0A1W2PR82 267 aa21.72■■□□□ 1.07
TMED3-205ENST00000558562 EFCAB2Q5VUJ9 269 aa21.71■■□□□ 1.07
TMED3-205ENST00000558562 EHMT2Q96KQ7 1210 aa21.7■■□□□ 1.06
TMED3-205ENST00000558562 DISP3Q9P2K9 1392 aa21.7■■□□□ 1.06
TMED3-205ENST00000558562 ILDR2Q71H61 639 aa21.69■■□□□ 1.06
TMED3-205ENST00000558562 MYO5CQ9NQX4 1742 aa21.69■■□□□ 1.06
TMED3-205ENST00000558562 STRCQ7RTU9 1775 aa21.68■■□□□ 1.06
TMED3-205ENST00000558562 AFAP1Q8N556 730 aa21.67■■□□□ 1.06
TMED3-205ENST00000558562 MYT1LQ9UL68 1186 aa21.66■■□□□ 1.06
TMED3-205ENST00000558562 KIF14Q15058 1648 aa21.66■■□□□ 1.06
TMED3-205ENST00000558562 DMRT2Q9Y5R5 561 aa21.65■■□□□ 1.06
TMED3-205ENST00000558562 UHRF1BP1Q6BDS2 1440 aa21.63■■□□□ 1.05
TMED3-205ENST00000558562 ZNF518AQ6AHZ1 1483 aa21.63■■□□□ 1.05
TMED3-205ENST00000558562 ARHGAP5Q13017 1502 aa21.62■■□□□ 1.05
TMED3-205ENST00000558562 CDK11AQ9UQ88 783 aaPredicted RBP21.61■■□□□ 1.05
TMED3-205ENST00000558562 UBTFP17480 764 aaKnown RBP21.59■■□□□ 1.05
TMED3-205ENST00000558562 KDM5CP41229 1560 aa21.59■■□□□ 1.05
TMED3-205ENST00000558562 FMN1Q68DA7 1419 aa21.59■■□□□ 1.05
TMED3-205ENST00000558562 DIP2CQ9Y2E4 1556 aa21.58■■□□□ 1.05
TMED3-205ENST00000558562 SETD1BQ9UPS6 1966 aaKnown RBP21.58■■□□□ 1.05
TMED3-205ENST00000558562 SOCS7O14512 581 aa21.57■■□□□ 1.04
TMED3-205ENST00000558562 TROQ12816 1431 aaPredicted RBP21.56■■□□□ 1.04
TMED3-205ENST00000558562 ARHGAP35Q9NRY4 1499 aa21.56■■□□□ 1.04
TMED3-205ENST00000558562 C3P01024 1663 aa21.55■■□□□ 1.04
TMED3-205ENST00000558562 ABCA6Q8N139 1617 aa21.55■■□□□ 1.04
TMED3-205ENST00000558562 ESF1Q9H501 851 aaKnown RBP21.52■■□□□ 1.04
TMED3-205ENST00000558562 PTPRTO14522 1441 aa21.52■■□□□ 1.04
TMED3-205ENST00000558562 CLIP1P30622 1438 aa21.52■■□□□ 1.04
TMED3-205ENST00000558562 CDC42BPBQ9Y5S2 1711 aa21.52■■□□□ 1.03
TMED3-205ENST00000558562 REREQ9P2R6 1566 aa21.51■■□□□ 1.03
TMED3-205ENST00000558562 LRRIQ1Q96JM4 1722 aa21.51■■□□□ 1.03
TMED3-205ENST00000558562 TRAPPC8Q9Y2L5 1435 aa21.5■■□□□ 1.03
TMED3-205ENST00000558562 MLH3Q9UHC1 1453 aa21.5■■□□□ 1.03
TMED3-205ENST00000558562 SPATA31D1Q6ZQQ2 1576 aa21.49■■□□□ 1.03
TMED3-205ENST00000558562 LTBP4Q8N2S1 1624 aa21.47■■□□□ 1.03
TMED3-205ENST00000558562 AGLP35573 1532 aa21.46■■□□□ 1.03
TMED3-205ENST00000558562 ABCC1P33527 1531 aa21.45■■□□□ 1.02
TMED3-205ENST00000558562 NCOA1Q15788 1441 aa21.44■■□□□ 1.02
TMED3-205ENST00000558562 PREX2Q70Z35 1606 aa21.44■■□□□ 1.02
TMED3-205ENST00000558562 ITSN2Q9NZM3 1697 aa21.44■■□□□ 1.02
TMED3-205ENST00000558562 KIDINS220Q9ULH0 1771 aa21.42■■□□□ 1.02
TMED3-205ENST00000558562 CNTLNQ9NXG0 1405 aa21.39■■□□□ 1.02
TMED3-205ENST00000558562 CAMSAP1Q5T5Y3 1602 aa21.39■■□□□ 1.01
TMED3-205ENST00000558562 ZNF777Q9ULD5 760 aaPredicted RBP21.38■■□□□ 1.01
TMED3-205ENST00000558562 NCKAP5LQ9HCH0 1330 aa21.37■■□□□ 1.01
TMED3-205ENST00000558562 IQSEC2Q5JU85 1478 aa21.37■■□□□ 1.01
TMED3-205ENST00000558562 CDC42BPAQ5VT25 1732 aa21.35■■□□□ 1.01
TMED3-205ENST00000558562 ZMYM3Q14202 1370 aa21.35■■□□□ 1.01
TMED3-205ENST00000558562 ZNF335Q9H4Z2 1342 aaPredicted RBP21.34■■□□□ 1.01
TMED3-205ENST00000558562 SAMD9LQ8IVG5 1584 aa21.34■■□□□ 1.01
TMED3-205ENST00000558562 NPATQ14207 1427 aa21.33■■□□□ 1.01
TMED3-205ENST00000558562 CCDC18Q5T9S5 1454 aa21.32■■□□□ 1
TMED3-205ENST00000558562 SUPT6HQ7KZ85 1726 aaKnown RBP21.32■■□□□ 1
TMED3-205ENST00000558562 CASKIN1Q8WXD9 1431 aa21.32■■□□□ 1
TMED3-205ENST00000558562 UBAP1LF5GYI3 381 aa21.32■■□□□ 1
TMED3-205ENST00000558562 MROH2AA6NES4 1674 aa21.31■■□□□ 1
TMED3-205ENST00000558562 HNRNPMP52272 730 aaKnown RBP eCLIP21.31■■□□□ 12e-6■■■□□ 16.3
TMED3-205ENST00000558562 SPAG9O60271 1321 aaKnown RBP21.3■■□□□ 1
TMED3-205ENST00000558562 SYCP2Q9BX26 1530 aa21.3■■□□□ 1
TMED3-205ENST00000558562 CLTCQ00610 1675 aaKnown RBP21.28■■□□□ 1
TMED3-205ENST00000558562 CEP162Q5TB80 1403 aa21.27■■□□□ 1
TMED3-205ENST00000558562 MYO3AQ8NEV4 1616 aa21.26■□□□□ 0.99
TMED3-205ENST00000558562 GPATCH8Q9UKJ3 1502 aaKnown RBP21.25■□□□□ 0.99
TMED3-205ENST00000558562 GGT6Q6P531 493 aa21.25■□□□□ 0.99
TMED3-205ENST00000558562 ATP7AQ04656 1500 aa21.24■□□□□ 0.99
TMED3-205ENST00000558562 PTPRKQ15262 1439 aa21.23■□□□□ 0.99
TMED3-205ENST00000558562 PKD2Q13563 968 aa21.23■□□□□ 0.99
TMED3-205ENST00000558562 CEP170BQ9Y4F5 1589 aaPredicted RBP21.23■□□□□ 0.99
TMED3-205ENST00000558562 ZNF142P52746 1687 aaPredicted RBP21.22■□□□□ 0.99
TMED3-205ENST00000558562 A2MP01023 1474 aa21.21■□□□□ 0.99
TMED3-205ENST00000558562 PLA2R1Q13018 1463 aa21.21■□□□□ 0.99
TMED3-205ENST00000558562 PLXNC1O60486 1568 aa21.21■□□□□ 0.99
TMED3-205ENST00000558562 TCOF1Q13428 1488 aaKnown RBP21.2■□□□□ 0.98
TMED3-205ENST00000558562 FYCO1Q9BQS8 1478 aa21.2■□□□□ 0.98
TMED3-205ENST00000558562 CFDP1Q9UEE9 299 aaPredicted RBP21.2■□□□□ 0.98
TMED3-205ENST00000558562 INO80Q9ULG1 1556 aaPredicted RBP21.19■□□□□ 0.98
TMED3-205ENST00000558562 PPP6R1Q9UPN7 881 aa21.18■□□□□ 0.98
TMED3-205ENST00000558562 SCAF1Q9H7N4 1312 aaKnown RBP21.17■□□□□ 0.98
TMED3-205ENST00000558562 KIAA1107Q9UPP5 1409 aa21.17■□□□□ 0.98
TMED3-205ENST00000558562 PLEKHH2Q8IVE3 1493 aa21.14■□□□□ 0.98
TMED3-205ENST00000558562 CCNB3Q8WWL7 1395 aa21.14■□□□□ 0.98
TMED3-205ENST00000558562 PIP4K2BP78356 416 aa21.14■□□□□ 0.97
TMED3-205ENST00000558562 HSPA1LP34931 641 aa21.13■□□□□ 0.97
TMED3-205ENST00000558562 ZNF644Q9H582 1327 aaPredicted RBP21.12■□□□□ 0.97
TMED3-205ENST00000558562 A2ML1A8K2U0 1454 aa21.11■□□□□ 0.97
TMED3-205ENST00000558562 DNMT1P26358 1616 aaKnown RBP21.11■□□□□ 0.97
TMED3-205ENST00000558562 ADGBQ8N7X0 1667 aa21.1■□□□□ 0.97
TMED3-205ENST00000558562 FBXO31Q5XUX0 539 aaPredicted RBP21.08■□□□□ 0.97
TMED3-205ENST00000558562 MTUS2Q5JR59 1369 aa21.07■□□□□ 0.96
TMED3-205ENST00000558562 MED1Q15648 1581 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms