RNA–Protein interactions for RNA: ENST00000558547.1

PIF1-204, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-204ENST00000558547 CFAP74Q9C0B2 1584 aa12.35□□□□□ -0.43
PIF1-204ENST00000558547 FAM9AQ8IZU1 332 aaPredicted RBP12.34□□□□□ -0.43
PIF1-204ENST00000558547 ARHGEF12Q9NZN5 1544 aa12.32□□□□□ -0.44
PIF1-204ENST00000558547 MAGI2Q86UL8 1455 aa12.29□□□□□ -0.44
PIF1-204ENST00000558547 RANGAP1P46060 587 aaPredicted RBP12.29□□□□□ -0.44
PIF1-204ENST00000558547 PLEKHD1A6NEE1 506 aa12.28□□□□□ -0.44
PIF1-204ENST00000558547 DMRT2Q9Y5R5 561 aa12.28□□□□□ -0.44
PIF1-204ENST00000558547 LTBP4Q8N2S1 1624 aa12.28□□□□□ -0.44
PIF1-204ENST00000558547 SCAPERQ9BY12 1400 aa12.28□□□□□ -0.44
PIF1-204ENST00000558547 ATP10AO60312 1499 aa12.27□□□□□ -0.45
PIF1-204ENST00000558547 UHRF1BP1Q6BDS2 1440 aa12.26□□□□□ -0.45
PIF1-204ENST00000558547 C9orf84Q5VXU9 1444 aa12.25□□□□□ -0.45
PIF1-204ENST00000558547 C3P01024 1663 aa12.25□□□□□ -0.45
PIF1-204ENST00000558547 CDK13Q14004 1512 aaKnown RBP12.23□□□□□ -0.45
PIF1-204ENST00000558547 PTPRTO14522 1441 aa12.23□□□□□ -0.45
PIF1-204ENST00000558547 SETD1BQ9UPS6 1966 aaKnown RBP12.22□□□□□ -0.45
PIF1-204ENST00000558547 PLCH2O75038 1416 aa12.21□□□□□ -0.45
PIF1-204ENST00000558547 MYO5CQ9NQX4 1742 aa12.21□□□□□ -0.45
PIF1-204ENST00000558547 DIP2CQ9Y2E4 1556 aa12.18□□□□□ -0.46
PIF1-204ENST00000558547 IQSEC2Q5JU85 1478 aa12.18□□□□□ -0.46
PIF1-204ENST00000558547 ABCA6Q8N139 1617 aa12.18□□□□□ -0.46
PIF1-204ENST00000558547 AFAP1Q8N556 730 aa12.17□□□□□ -0.46
PIF1-204ENST00000558547 KIF14Q15058 1648 aa12.17□□□□□ -0.46
PIF1-204ENST00000558547 CSRNP3Q8WYN3 585 aa12.16□□□□□ -0.46
PIF1-204ENST00000558547 NCOA1Q15788 1441 aa12.16□□□□□ -0.46
PIF1-204ENST00000558547 KDM5CP41229 1560 aa12.16□□□□□ -0.46
PIF1-204ENST00000558547 ZNF518AQ6AHZ1 1483 aa12.15□□□□□ -0.46
PIF1-204ENST00000558547 CAMSAP1Q5T5Y3 1602 aa12.15□□□□□ -0.47
PIF1-204ENST00000558547 UBAP1LF5GYI3 381 aa12.14□□□□□ -0.47
PIF1-204ENST00000558547 EFCAB2Q5VUJ9 269 aa12.14□□□□□ -0.47
PIF1-204ENST00000558547 MYT1LQ9UL68 1186 aa12.14□□□□□ -0.47
PIF1-204ENST00000558547 REREQ9P2R6 1566 aa12.13□□□□□ -0.47
PIF1-204ENST00000558547 ZNF335Q9H4Z2 1342 aaPredicted RBP12.13□□□□□ -0.47
PIF1-204ENST00000558547 TRAPPC8Q9Y2L5 1435 aa12.13□□□□□ -0.47
PIF1-204ENST00000558547 ARHGAP5Q13017 1502 aa12.12□□□□□ -0.47
PIF1-204ENST00000558547 NCKAP5LQ9HCH0 1330 aa12.11□□□□□ -0.47
PIF1-204ENST00000558547 CDC42BPBQ9Y5S2 1711 aa12.11□□□□□ -0.47
PIF1-204ENST00000558547 ATP1B4Q9UN42 357 aaPredicted RBP12.11□□□□□ -0.47
PIF1-204ENST00000558547 MED1Q15648 1581 aaPredicted RBP12.1□□□□□ -0.47
PIF1-204ENST00000558547 ESF1Q9H501 851 aaKnown RBP12.1□□□□□ -0.47
PIF1-204ENST00000558547 SUPT6HQ7KZ85 1726 aaKnown RBP12.09□□□□□ -0.47
PIF1-204ENST00000558547 LRRIQ1Q96JM4 1722 aa12.09□□□□□ -0.47
PIF1-204ENST00000558547 AGLP35573 1532 aa12.09□□□□□ -0.47
PIF1-204ENST00000558547 KIDINS220Q9ULH0 1771 aa12.08□□□□□ -0.48
PIF1-204ENST00000558547 MLH3Q9UHC1 1453 aa12.08□□□□□ -0.48
PIF1-204ENST00000558547 ITSN2Q9NZM3 1697 aa12.07□□□□□ -0.48
PIF1-204ENST00000558547 MROH2AA6NES4 1674 aa12.06□□□□□ -0.48
PIF1-204ENST00000558547 HSPA1LP34931 641 aa12.06□□□□□ -0.48
PIF1-204ENST00000558547 MYO3AQ8NEV4 1616 aa12.05□□□□□ -0.48
PIF1-204ENST00000558547 ZNF142P52746 1687 aaPredicted RBP12.05□□□□□ -0.48
PIF1-204ENST00000558547 CLTCQ00610 1675 aaKnown RBP12.05□□□□□ -0.48
PIF1-204ENST00000558547 ABCC1P33527 1531 aa12.05□□□□□ -0.48
PIF1-204ENST00000558547 SCAF1Q9H7N4 1312 aaKnown RBP12.05□□□□□ -0.48
PIF1-204ENST00000558547 PIP4K2BP78356 416 aa12.04□□□□□ -0.48
PIF1-204ENST00000558547 PREX2Q70Z35 1606 aa12.04□□□□□ -0.48
PIF1-204ENST00000558547 TROQ12816 1431 aaPredicted RBP12.03□□□□□ -0.48
PIF1-204ENST00000558547 NPATQ14207 1427 aa12.03□□□□□ -0.48
PIF1-204ENST00000558547 CNTLNQ9NXG0 1405 aa12.03□□□□□ -0.48
PIF1-204ENST00000558547 ZMYM3Q14202 1370 aa12.03□□□□□ -0.48
PIF1-204ENST00000558547 CEP170BQ9Y4F5 1589 aaPredicted RBP12.02□□□□□ -0.49
PIF1-204ENST00000558547 EHMT2Q96KQ7 1210 aa12.02□□□□□ -0.49
PIF1-204ENST00000558547 TCOF1Q13428 1488 aaKnown RBP12.02□□□□□ -0.49
PIF1-204ENST00000558547 CDK11AQ9UQ88 783 aaPredicted RBP12.01□□□□□ -0.49
PIF1-204ENST00000558547 PLA2R1Q13018 1463 aa12.01□□□□□ -0.49
PIF1-204ENST00000558547 CDC42BPAQ5VT25 1732 aa12□□□□□ -0.49
PIF1-204ENST00000558547 PKD2Q13563 968 aa11.99□□□□□ -0.49
PIF1-204ENST00000558547 CLIP1P30622 1438 aa11.99□□□□□ -0.49
PIF1-204ENST00000558547 FMN1Q68DA7 1419 aa11.99□□□□□ -0.49
PIF1-204ENST00000558547 ARHGAP35Q9NRY4 1499 aa11.99□□□□□ -0.49
PIF1-204ENST00000558547 SAMD9LQ8IVG5 1584 aa11.99□□□□□ -0.49
PIF1-204ENST00000558547 PPP6R1Q9UPN7 881 aa11.98□□□□□ -0.49
PIF1-204ENST00000558547 EEA1Q15075 1411 aa11.97□□□□□ -0.49
PIF1-204ENST00000558547 PTPRKQ15262 1439 aa11.97□□□□□ -0.49
PIF1-204ENST00000558547 POLR1AO95602 1720 aaPredicted RBP11.97□□□□□ -0.49
PIF1-204ENST00000558547 ALKQ9UM73 1620 aa11.97□□□□□ -0.49
PIF1-204ENST00000558547 PHF23Q9BUL5 403 aaPredicted RBP11.96□□□□□ -0.49
PIF1-204ENST00000558547 SENP3Q9H4L4 574 aaPredicted RBP11.96□□□□□ -0.49
PIF1-204ENST00000558547 DNMT1P26358 1616 aaKnown RBP11.96□□□□□ -0.5
PIF1-204ENST00000558547 NEURL4Q96JN8 1562 aa11.95□□□□□ -0.5
PIF1-204ENST00000558547 TOM1O60784 492 aa11.94□□□□□ -0.5
PIF1-204ENST00000558547 ZNF777Q9ULD5 760 aaPredicted RBP11.94□□□□□ -0.5
PIF1-204ENST00000558547 SYCP2Q9BX26 1530 aa11.94□□□□□ -0.5
PIF1-204ENST00000558547 PLXNC1O60486 1568 aa11.93□□□□□ -0.5
PIF1-204ENST00000558547 SHANK2Q9UPX8 1470 aa11.93□□□□□ -0.5
PIF1-204ENST00000558547 SPAG9O60271 1321 aaKnown RBP11.92□□□□□ -0.5
PIF1-204ENST00000558547 CPS1P31327 1500 aa11.92□□□□□ -0.5
PIF1-204ENST00000558547 ATP7AQ04656 1500 aa11.92□□□□□ -0.5
PIF1-204ENST00000558547 HNRNPMP52272 730 aaKnown RBP eCLIP11.92□□□□□ -0.5
PIF1-204ENST00000558547 GGT6Q6P531 493 aa11.92□□□□□ -0.5
PIF1-204ENST00000558547 INO80Q9ULG1 1556 aaPredicted RBP11.92□□□□□ -0.5
PIF1-204ENST00000558547 A2ML1A8K2U0 1454 aa11.91□□□□□ -0.5
PIF1-204ENST00000558547 UBTFP17480 764 aaKnown RBP11.91□□□□□ -0.5
PIF1-204ENST00000558547 VWDEQ8N2E2 1590 aa11.91□□□□□ -0.5
PIF1-204ENST00000558547 A2MP01023 1474 aa11.9□□□□□ -0.5
PIF1-204ENST00000558547 STRCP1A6NGW2 1772 aa11.9□□□□□ -0.51
PIF1-204ENST00000558547 RGS17Q9UGC6 210 aaPredicted RBP11.88□□□□□ -0.51
PIF1-204ENST00000558547 FBXO31Q5XUX0 539 aaPredicted RBP11.87□□□□□ -0.51
PIF1-204ENST00000558547 ADGBQ8N7X0 1667 aa11.87□□□□□ -0.51
PIF1-204ENST00000558547 GPATCH8Q9UKJ3 1502 aaKnown RBP11.86□□□□□ -0.51
PIF1-204ENST00000558547 CCDC18Q5T9S5 1454 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms