RNA–Protein interactions for RNA: ENST00000558090.2

HOMER2-204, Transcript of homer scaffold protein 2, humanhuman

TSL 1 (best)

Gene HOMER2, Length 10,341 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER2-204ENST00000558090 NCBP3Q53F19 620 aaKnown RBP7.09□□□□□ -1.27
HOMER2-204ENST00000558090 DDRGK1Q96HY6 314 aa7.09□□□□□ -1.28
HOMER2-204ENST00000558090 JPH4Q96JJ6 628 aa7.09□□□□□ -1.28
HOMER2-204ENST00000558090 TOPBP1Q92547 1522 aa7.08□□□□□ -1.28
HOMER2-204ENST00000558090 THOC2Q8NI27 1593 aaKnown RBP7.08□□□□□ -1.28
HOMER2-204ENST00000558090 CASKIN1Q8WXD9 1431 aa7.08□□□□□ -1.28
HOMER2-204ENST00000558090 EHBP1L1Q8N3D4 1523 aa7.08□□□□□ -1.28
HOMER2-204ENST00000558090 VSIG10Q8N0Z9 540 aa7.07□□□□□ -1.28
HOMER2-204ENST00000558090 ABCA10Q8WWZ4 1543 aa7.07□□□□□ -1.28
HOMER2-204ENST00000558090 NOC3LQ8WTT2 800 aaKnown RBP7.07□□□□□ -1.28
HOMER2-204ENST00000558090 ARID3AQ99856 593 aa7.07□□□□□ -1.28
HOMER2-204ENST00000558090 EIF4G2P78344 907 aaKnown RBP eCLIP7.07□□□□□ -1.28
HOMER2-204ENST00000558090 TULP1O00294 542 aaPredicted RBP7.06□□□□□ -1.28
HOMER2-204ENST00000558090 ANKRD30AQ9BXX3 1397 aa7.06□□□□□ -1.28
HOMER2-204ENST00000558090 RUSC2Q8N2Y8 1516 aa7.06□□□□□ -1.28
HOMER2-204ENST00000558090 CHIC2Q9UKJ5 165 aa7.06□□□□□ -1.28
HOMER2-204ENST00000558090 PRXQ9BXM0 1461 aa7.06□□□□□ -1.28
HOMER2-204ENST00000558090 HSP90AA2PQ14568 343 aaPredicted RBP7.05□□□□□ -1.28
HOMER2-204ENST00000558090 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.05□□□□□ -1.28
HOMER2-204ENST00000558090 PBRM1Q86U86 1689 aa7.05□□□□□ -1.28
HOMER2-204ENST00000558090 GOLGA6L4A6NEF3 574 aa7.04□□□□□ -1.28
HOMER2-204ENST00000558090 NEFHP12036 1026 aa7.04□□□□□ -1.28
HOMER2-204ENST00000558090 LAS1LQ9Y4W2 734 aaKnown RBP7.04□□□□□ -1.28
HOMER2-204ENST00000558090 USP35Q9P2H5 1018 aa7.03□□□□□ -1.28
HOMER2-204ENST00000558090 CHGAP10645 457 aaKnown RBP7.03□□□□□ -1.28
HOMER2-204ENST00000558090 CCDC136Q96JN2 1154 aa7.03□□□□□ -1.28
HOMER2-204ENST00000558090 IQGAP2Q13576 1575 aa7.03□□□□□ -1.28
HOMER2-204ENST00000558090 TAF7LQ5H9L4 462 aa7.03□□□□□ -1.28
HOMER2-204ENST00000558090 IGF1RP08069 1367 aa7.02□□□□□ -1.28
HOMER2-204ENST00000558090 TIAM1Q13009 1591 aa7.02□□□□□ -1.29
HOMER2-204ENST00000558090 PPM1GO15355 546 aaPredicted RBP7.02□□□□□ -1.29
HOMER2-204ENST00000558090 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.02□□□□□ -1.29
HOMER2-204ENST00000558090 PLEKHH2Q8IVE3 1493 aa7.02□□□□□ -1.29
HOMER2-204ENST00000558090 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.02□□□□□ -1.29
HOMER2-204ENST00000558090 MAGI1Q96QZ7 1491 aaPredicted RBP7.02□□□□□ -1.29
HOMER2-204ENST00000558090 ITSN2Q9NZM3 1697 aa7.02□□□□□ -1.29
HOMER2-204ENST00000558090 MYOM3Q5VTT5 1437 aa7.01□□□□□ -1.29
HOMER2-204ENST00000558090 ROCK2O75116 1388 aaKnown RBP7.01□□□□□ -1.29
HOMER2-204ENST00000558090 POLA1P09884 1462 aaPredicted RBP7.01□□□□□ -1.29
HOMER2-204ENST00000558090 FHOD3Q2V2M9 1422 aa7.01□□□□□ -1.29
HOMER2-204ENST00000558090 UACAQ9BZF9 1416 aa7□□□□□ -1.29
HOMER2-204ENST00000558090 LRRC9Q6ZRR7 1453 aa7□□□□□ -1.29
HOMER2-204ENST00000558090 RRP12Q5JTH9 1297 aaKnown RBP7□□□□□ -1.29
HOMER2-204ENST00000558090 STAG3Q9UJ98 1225 aa7□□□□□ -1.29
HOMER2-204ENST00000558090 PRM3Q9NNZ6 103 aa7□□□□□ -1.29
HOMER2-204ENST00000558090 EIF3AQ14152 1382 aaKnown RBP7□□□□□ -1.29
HOMER2-204ENST00000558090 SNAPC4Q5SXM2 1469 aa6.99□□□□□ -1.29
HOMER2-204ENST00000558090 HAP1P54257 671 aaPredicted RBP6.99□□□□□ -1.29
HOMER2-204ENST00000558090 TPRNQ4KMQ1 711 aa6.99□□□□□ -1.29
HOMER2-204ENST00000558090 SENP3Q9H4L4 574 aaPredicted RBP6.99□□□□□ -1.29
HOMER2-204ENST00000558090 STAC3Q96MF2 364 aa6.98□□□□□ -1.29
HOMER2-204ENST00000558090 URB2Q14146 1524 aaKnown RBP6.98□□□□□ -1.29
HOMER2-204ENST00000558090 MIA2Q96PC5 1412 aa6.98□□□□□ -1.29
HOMER2-204ENST00000558090 MLECQ14165 292 aa6.98□□□□□ -1.29
HOMER2-204ENST00000558090 EFCAB2Q5VUJ9 269 aa6.98□□□□□ -1.29
HOMER2-204ENST00000558090 DRC7Q8IY82 874 aa6.98□□□□□ -1.29
HOMER2-204ENST00000558090 CFAP43Q8NDM7 1665 aa6.98□□□□□ -1.29
HOMER2-204ENST00000558090 PATL2C9JE40 543 aaKnown RBP6.98□□□□□ -1.29
HOMER2-204ENST00000558090 RRBP1Q9P2E9 1410 aaKnown RBP6.98□□□□□ -1.29
HOMER2-204ENST00000558090 FGD6Q6ZV73 1430 aa6.97□□□□□ -1.29
HOMER2-204ENST00000558090 RAB3GAP2Q9H2M9 1393 aa6.97□□□□□ -1.29
HOMER2-204ENST00000558090 HDGFP51858 240 aaKnown RBP6.97□□□□□ -1.29
HOMER2-204ENST00000558090 RRP7BPQ9NSQ0 103 aa6.97□□□□□ -1.29
HOMER2-204ENST00000558090 SYNJ2O15056 1496 aa6.97□□□□□ -1.29
HOMER2-204ENST00000558090 KIAA2012Q0VF49 1180 aa6.97□□□□□ -1.29
HOMER2-204ENST00000558090 CCER2I3L3R5 266 aa6.97□□□□□ -1.29
HOMER2-204ENST00000558090 PTPRGP23470 1445 aa6.97□□□□□ -1.29
HOMER2-204ENST00000558090 DEKP35659 375 aaKnown RBP6.96□□□□□ -1.29
HOMER2-204ENST00000558090 PKNOX2Q96KN3 472 aa6.96□□□□□ -1.3
HOMER2-204ENST00000558090 TMC1Q8TDI8 760 aa6.96□□□□□ -1.3
HOMER2-204ENST00000558090 GOLGA6L3A6NEY3 463 aa6.95□□□□□ -1.3
HOMER2-204ENST00000558090 KIAA0586Q9BVV6 1533 aa6.95□□□□□ -1.3
HOMER2-204ENST00000558090 ZNF771Q7L3S4 317 aaPredicted RBP6.95□□□□□ -1.3
HOMER2-204ENST00000558090 ARAP1Q96P48 1450 aa6.95□□□□□ -1.3
HOMER2-204ENST00000558090 WDR43Q15061 677 aaKnown RBP eCLIP6.94□□□□□ -1.3
HOMER2-204ENST00000558090 ZNF608Q9ULD9 1512 aaPredicted RBP6.94□□□□□ -1.3
HOMER2-204ENST00000558090 CFAP53Q96M91 514 aa6.94□□□□□ -1.3
HOMER2-204ENST00000558090 KIF14Q15058 1648 aa6.94□□□□□ -1.3
HOMER2-204ENST00000558090 FAM69CQ0P6D2 419 aa6.94□□□□□ -1.3
HOMER2-204ENST00000558090 ZNF526Q8TF50 670 aaPredicted RBP6.94□□□□□ -1.3
HOMER2-204ENST00000558090 PHLDB1Q86UU1 1377 aa6.93□□□□□ -1.3
HOMER2-204ENST00000558090 NOM1Q5C9Z4 860 aaKnown RBP6.93□□□□□ -1.3
HOMER2-204ENST00000558090 CHMP4BQ9H444 224 aaKnown RBP6.93□□□□□ -1.3
HOMER2-204ENST00000558090 ZBTB7CA1YPR0 619 aa6.93□□□□□ -1.3
HOMER2-204ENST00000558090 DDX10Q13206 875 aaKnown RBP6.92□□□□□ -1.3
HOMER2-204ENST00000558090 MRS2Q9HD23 443 aa6.92□□□□□ -1.3
HOMER2-204ENST00000558090 SCAPERQ9BY12 1400 aa6.92□□□□□ -1.3
HOMER2-204ENST00000558090 NCOA2Q15596 1464 aa6.92□□□□□ -1.3
HOMER2-204ENST00000558090 MYH16Q9H6N6 1097 aa6.92□□□□□ -1.3
HOMER2-204ENST00000558090 RSPH6AQ9H0K4 717 aa6.92□□□□□ -1.3
HOMER2-204ENST00000558090 PCF11O94913 1555 aaKnown RBP6.91□□□□□ -1.3
HOMER2-204ENST00000558090 PRG4Q92954 1404 aaPredicted RBP6.91□□□□□ -1.3
HOMER2-204ENST00000558090 MAP7D2Q96T17 732 aa6.91□□□□□ -1.3
HOMER2-204ENST00000558090 HNRNPUQ00839 825 aaKnown RBP eCLIP6.91□□□□□ -1.3
HOMER2-204ENST00000558090 KNSTRNQ9Y448 316 aa6.91□□□□□ -1.3
HOMER2-204ENST00000558090 NOP58Q9Y2X3 529 aaKnown RBP6.91□□□□□ -1.3
HOMER2-204ENST00000558090 C14orf37Q86TY3 774 aa6.91□□□□□ -1.3
HOMER2-204ENST00000558090 MS4A1P11836 297 aa6.9□□□□□ -1.3
HOMER2-204ENST00000558090 PTPN23Q9H3S7 1636 aa6.9□□□□□ -1.3
HOMER2-204ENST00000558090 AKNAQ7Z591 1439 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms