RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 HECW1Q76N89 1606 aa17.12■□□□□ 0.33
IGKV2D-28-202ENST00000558026 HSPA1LP34931 641 aa17.1■□□□□ 0.33
IGKV2D-28-202ENST00000558026 P3H3Q8IVL6 736 aa17.1■□□□□ 0.33
IGKV2D-28-202ENST00000558026 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
IGKV2D-28-202ENST00000558026 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
IGKV2D-28-202ENST00000558026 ZNF335Q9H4Z2 1342 aaPredicted RBP17.09■□□□□ 0.33
IGKV2D-28-202ENST00000558026 MAGI2Q86UL8 1455 aa17.09■□□□□ 0.33
IGKV2D-28-202ENST00000558026 NCOA1Q15788 1441 aa17.07■□□□□ 0.32
IGKV2D-28-202ENST00000558026 CFAP74Q9C0B2 1584 aa17.06■□□□□ 0.32
IGKV2D-28-202ENST00000558026 PHF23Q9BUL5 403 aaPredicted RBP17.06■□□□□ 0.32
IGKV2D-28-202ENST00000558026 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
IGKV2D-28-202ENST00000558026 ATP10AO60312 1499 aa17.05■□□□□ 0.32
IGKV2D-28-202ENST00000558026 C3P01024 1663 aa17.04■□□□□ 0.32
IGKV2D-28-202ENST00000558026 C9orf84Q5VXU9 1444 aa17.04■□□□□ 0.32
IGKV2D-28-202ENST00000558026 RAPGEF6Q8TEU7 1601 aa17.02■□□□□ 0.31
IGKV2D-28-202ENST00000558026 PIP4K2BP78356 416 aa17.01■□□□□ 0.31
IGKV2D-28-202ENST00000558026 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17■□□□□ 0.31
IGKV2D-28-202ENST00000558026 NCKAP5LQ9HCH0 1330 aa16.99■□□□□ 0.31
IGKV2D-28-202ENST00000558026 SCAPERQ9BY12 1400 aa16.99■□□□□ 0.31
IGKV2D-28-202ENST00000558026 CAMSAP1Q5T5Y3 1602 aa16.99■□□□□ 0.31
IGKV2D-28-202ENST00000558026 FAM9AQ8IZU1 332 aaPredicted RBP16.98■□□□□ 0.31
IGKV2D-28-202ENST00000558026 NUP153P49790 1475 aaKnown RBP16.97■□□□□ 0.31
IGKV2D-28-202ENST00000558026 TRAPPC8Q9Y2L5 1435 aa16.96■□□□□ 0.3
IGKV2D-28-202ENST00000558026 PLEKHD1A6NEE1 506 aa16.92■□□□□ 0.3
IGKV2D-28-202ENST00000558026 SENP3Q9H4L4 574 aaPredicted RBP16.88■□□□□ 0.29
IGKV2D-28-202ENST00000558026 RGS17Q9UGC6 210 aaPredicted RBP16.88■□□□□ 0.29
IGKV2D-28-202ENST00000558026 SAMD9Q5K651 1589 aa16.86■□□□□ 0.29
IGKV2D-28-202ENST00000558026 TOM1O60784 492 aa16.86■□□□□ 0.29
IGKV2D-28-202ENST00000558026 DIP2CQ9Y2E4 1556 aa16.85■□□□□ 0.29
IGKV2D-28-202ENST00000558026 ESF1Q9H501 851 aaKnown RBP16.85■□□□□ 0.29
IGKV2D-28-202ENST00000558026 PLCH2O75038 1416 aa16.84■□□□□ 0.29
IGKV2D-28-202ENST00000558026 AFAP1Q8N556 730 aa16.83■□□□□ 0.28
IGKV2D-28-202ENST00000558026 MYT1LQ9UL68 1186 aa16.83■□□□□ 0.28
IGKV2D-28-202ENST00000558026 SUPT6HQ7KZ85 1726 aaKnown RBP16.82■□□□□ 0.28
IGKV2D-28-202ENST00000558026 ABCA6Q8N139 1617 aa16.81■□□□□ 0.28
IGKV2D-28-202ENST00000558026 PRXQ9BXM0 1461 aa16.81■□□□□ 0.28
IGKV2D-28-202ENST00000558026 PKD2Q13563 968 aa16.81■□□□□ 0.28
IGKV2D-28-202ENST00000558026 PPP6R1Q9UPN7 881 aa16.81■□□□□ 0.28
IGKV2D-28-202ENST00000558026 ALKQ9UM73 1620 aa16.81■□□□□ 0.28
IGKV2D-28-202ENST00000558026 TCOF1Q13428 1488 aaKnown RBP16.8■□□□□ 0.28
IGKV2D-28-202ENST00000558026 KDM5CP41229 1560 aa16.8■□□□□ 0.28
IGKV2D-28-202ENST00000558026 REREQ9P2R6 1566 aa16.8■□□□□ 0.28
IGKV2D-28-202ENST00000558026 ZNF518AQ6AHZ1 1483 aa16.8■□□□□ 0.28
IGKV2D-28-202ENST00000558026 PLA2R1Q13018 1463 aa16.79■□□□□ 0.28
IGKV2D-28-202ENST00000558026 NPATQ14207 1427 aa16.79■□□□□ 0.28
IGKV2D-28-202ENST00000558026 AGLP35573 1532 aa16.78■□□□□ 0.28
IGKV2D-28-202ENST00000558026 EFCAB2Q5VUJ9 269 aa16.77■□□□□ 0.28
IGKV2D-28-202ENST00000558026 ZNF142P52746 1687 aaPredicted RBP16.76■□□□□ 0.27
IGKV2D-28-202ENST00000558026 MYO3AQ8NEV4 1616 aa16.76■□□□□ 0.27
IGKV2D-28-202ENST00000558026 CNTLNQ9NXG0 1405 aa16.76■□□□□ 0.27
IGKV2D-28-202ENST00000558026 MYO5CQ9NQX4 1742 aa16.76■□□□□ 0.27
IGKV2D-28-202ENST00000558026 RANGAP1P46060 587 aaPredicted RBP16.75■□□□□ 0.27
IGKV2D-28-202ENST00000558026 CDK13Q14004 1512 aaKnown RBP16.75■□□□□ 0.27
IGKV2D-28-202ENST00000558026 CEP170BQ9Y4F5 1589 aaPredicted RBP16.74■□□□□ 0.27
IGKV2D-28-202ENST00000558026 POTEAQ6S8J7 498 aa16.74■□□□□ 0.27
IGKV2D-28-202ENST00000558026 CPS1P31327 1500 aa16.74■□□□□ 0.27
IGKV2D-28-202ENST00000558026 SETD1AO15047 1707 aaKnown RBP16.73■□□□□ 0.27
IGKV2D-28-202ENST00000558026 ZMYM3Q14202 1370 aa16.73■□□□□ 0.27
IGKV2D-28-202ENST00000558026 MROH2AA6NES4 1674 aa16.72■□□□□ 0.27
IGKV2D-28-202ENST00000558026 SHANK2Q9UPX8 1470 aa16.72■□□□□ 0.27
IGKV2D-28-202ENST00000558026 PTPRKQ15262 1439 aa16.7■□□□□ 0.26
IGKV2D-28-202ENST00000558026 MLH3Q9UHC1 1453 aa16.68■□□□□ 0.26
IGKV2D-28-202ENST00000558026 ARHGAP5Q13017 1502 aa16.67■□□□□ 0.26
IGKV2D-28-202ENST00000558026 NEURL4Q96JN8 1562 aa16.66■□□□□ 0.26
IGKV2D-28-202ENST00000558026 KIF14Q15058 1648 aa16.66■□□□□ 0.26
IGKV2D-28-202ENST00000558026 CLTCQ00610 1675 aaKnown RBP16.65■□□□□ 0.26
IGKV2D-28-202ENST00000558026 POLR1AO95602 1720 aaPredicted RBP16.65■□□□□ 0.26
IGKV2D-28-202ENST00000558026 KIDINS220Q9ULH0 1771 aa16.64■□□□□ 0.25
IGKV2D-28-202ENST00000558026 VWDEQ8N2E2 1590 aa16.64■□□□□ 0.25
IGKV2D-28-202ENST00000558026 DNMT1P26358 1616 aaKnown RBP16.62■□□□□ 0.25
IGKV2D-28-202ENST00000558026 A2ML1A8K2U0 1454 aa16.59■□□□□ 0.25
IGKV2D-28-202ENST00000558026 CDC42BPBQ9Y5S2 1711 aa16.58■□□□□ 0.24
IGKV2D-28-202ENST00000558026 STRCP1A6NGW2 1772 aa16.57■□□□□ 0.24
IGKV2D-28-202ENST00000558026 ITSN2Q9NZM3 1697 aa16.56■□□□□ 0.24
IGKV2D-28-202ENST00000558026 RNF17Q9BXT8 1623 aaKnown RBP16.56■□□□□ 0.24
IGKV2D-28-202ENST00000558026 ABCC1P33527 1531 aa16.55■□□□□ 0.24
IGKV2D-28-202ENST00000558026 LRRC7Q96NW7 1537 aa16.55■□□□□ 0.24
IGKV2D-28-202ENST00000558026 UPF1Q92900 1129 aaKnown RBP eCLIP16.54■□□□□ 0.24
IGKV2D-28-202ENST00000558026 ATP1B4Q9UN42 357 aaPredicted RBP16.54■□□□□ 0.24
IGKV2D-28-202ENST00000558026 SRCAPQ6ZRS2 3230 aa16.52■□□□□ 0.23
IGKV2D-28-202ENST00000558026 GGT6Q6P531 493 aa16.5■□□□□ 0.23
IGKV2D-28-202ENST00000558026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.5■□□□□ 0.23
IGKV2D-28-202ENST00000558026 SAMD9LQ8IVG5 1584 aa16.48■□□□□ 0.23
IGKV2D-28-202ENST00000558026 NPHP4O75161 1426 aaPredicted RBP16.48■□□□□ 0.23
IGKV2D-28-202ENST00000558026 TROQ12816 1431 aaPredicted RBP16.48■□□□□ 0.23
IGKV2D-28-202ENST00000558026 ANKLE2Q86XL3 938 aa16.48■□□□□ 0.23
IGKV2D-28-202ENST00000558026 PREX2Q70Z35 1606 aa16.48■□□□□ 0.23
IGKV2D-28-202ENST00000558026 SYNMO15061 1565 aa16.46■□□□□ 0.23
IGKV2D-28-202ENST00000558026 FBXO31Q5XUX0 539 aaPredicted RBP16.45■□□□□ 0.22
IGKV2D-28-202ENST00000558026 CDK11AQ9UQ88 783 aaPredicted RBP16.45■□□□□ 0.22
IGKV2D-28-202ENST00000558026 PLXNC1O60486 1568 aa16.45■□□□□ 0.22
IGKV2D-28-202ENST00000558026 IQGAP1P46940 1657 aa16.44■□□□□ 0.22
IGKV2D-28-202ENST00000558026 MED14O60244 1454 aa16.44■□□□□ 0.22
IGKV2D-28-202ENST00000558026 TNRQ92752 1358 aa16.43■□□□□ 0.22
IGKV2D-28-202ENST00000558026 DEPDC5O75140 1603 aa16.43■□□□□ 0.22
IGKV2D-28-202ENST00000558026 CLIP1P30622 1438 aa16.43■□□□□ 0.22
IGKV2D-28-202ENST00000558026 CSRNP3Q8WYN3 585 aa16.42■□□□□ 0.22
IGKV2D-28-202ENST00000558026 XIRP1Q702N8 1843 aaKnown RBP16.42■□□□□ 0.22
IGKV2D-28-202ENST00000558026 SPAG9O60271 1321 aaKnown RBP16.42■□□□□ 0.22
IGKV2D-28-202ENST00000558026 A2MP01023 1474 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms