RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 SIGLEC1Q9BZZ2 1709 aa16.35■□□□□ 0.21
PABPN1-208ENST00000557702 LTBP4Q8N2S1 1624 aa16.34■□□□□ 0.21
PABPN1-208ENST00000557702 PLEKHD1A6NEE1 506 aa16.34■□□□□ 0.21
PABPN1-208ENST00000557702 ARHGEF12Q9NZN5 1544 aa16.34■□□□□ 0.21
PABPN1-208ENST00000557702 UBAP1LF5GYI3 381 aa16.32■□□□□ 0.2
PABPN1-208ENST00000557702 CFAP74Q9C0B2 1584 aa16.3■□□□□ 0.2
PABPN1-208ENST00000557702 ATP10AO60312 1499 aa16.3■□□□□ 0.2
PABPN1-208ENST00000557702 HECW1Q76N89 1606 aa16.28■□□□□ 0.2
PABPN1-208ENST00000557702 C9orf84Q5VXU9 1444 aa16.28■□□□□ 0.2
PABPN1-208ENST00000557702 RAPGEF6Q8TEU7 1601 aa16.27■□□□□ 0.2
PABPN1-208ENST00000557702 SCAPERQ9BY12 1400 aa16.26■□□□□ 0.19
PABPN1-208ENST00000557702 NUP153P49790 1475 aaKnown RBP16.24■□□□□ 0.19
PABPN1-208ENST00000557702 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.23■□□□□ 0.19
PABPN1-208ENST00000557702 NCOA1Q15788 1441 aa16.22■□□□□ 0.19
PABPN1-208ENST00000557702 ESF1Q9H501 851 aaKnown RBP16.22■□□□□ 0.19
PABPN1-208ENST00000557702 PRXQ9BXM0 1461 aa16.22■□□□□ 0.19
PABPN1-208ENST00000557702 ZNF335Q9H4Z2 1342 aaPredicted RBP16.2■□□□□ 0.18
PABPN1-208ENST00000557702 TRAPPC8Q9Y2L5 1435 aa16.2■□□□□ 0.18
PABPN1-208ENST00000557702 PHF23Q9BUL5 403 aaPredicted RBP16.19■□□□□ 0.18
PABPN1-208ENST00000557702 HSPA1LP34931 641 aa16.18■□□□□ 0.18
PABPN1-208ENST00000557702 MYT1LQ9UL68 1186 aa16.18■□□□□ 0.18
PABPN1-208ENST00000557702 PLCH2O75038 1416 aa16.18■□□□□ 0.18
PABPN1-208ENST00000557702 MED1Q15648 1581 aaPredicted RBP16.17■□□□□ 0.18
PABPN1-208ENST00000557702 SCAF1Q9H7N4 1312 aaKnown RBP16.17■□□□□ 0.18
PABPN1-208ENST00000557702 SAMD9Q5K651 1589 aa16.15■□□□□ 0.18
PABPN1-208ENST00000557702 EFCAB2Q5VUJ9 269 aa16.15■□□□□ 0.18
PABPN1-208ENST00000557702 NCKAP5LQ9HCH0 1330 aa16.15■□□□□ 0.18
PABPN1-208ENST00000557702 PIP4K2BP78356 416 aa16.14■□□□□ 0.17
PABPN1-208ENST00000557702 C3P01024 1663 aa16.13■□□□□ 0.17
PABPN1-208ENST00000557702 AFAP1Q8N556 730 aa16.12■□□□□ 0.17
PABPN1-208ENST00000557702 CAMSAP1Q5T5Y3 1602 aa16.12■□□□□ 0.17
PABPN1-208ENST00000557702 TOM1O60784 492 aa16.11■□□□□ 0.17
PABPN1-208ENST00000557702 PKD2Q13563 968 aa16.11■□□□□ 0.17
PABPN1-208ENST00000557702 ZNF518AQ6AHZ1 1483 aa16.1■□□□□ 0.17
PABPN1-208ENST00000557702 RANGAP1P46060 587 aaPredicted RBP16.1■□□□□ 0.17
PABPN1-208ENST00000557702 CNTLNQ9NXG0 1405 aa16.08■□□□□ 0.16
PABPN1-208ENST00000557702 NPATQ14207 1427 aa16.05■□□□□ 0.16
PABPN1-208ENST00000557702 PPP6R1Q9UPN7 881 aa16.05■□□□□ 0.16
PABPN1-208ENST00000557702 REREQ9P2R6 1566 aa16.04■□□□□ 0.16
PABPN1-208ENST00000557702 AGLP35573 1532 aa16.04■□□□□ 0.16
PABPN1-208ENST00000557702 KDM5CP41229 1560 aa16.03■□□□□ 0.16
PABPN1-208ENST00000557702 DIP2CQ9Y2E4 1556 aa16.03■□□□□ 0.16
PABPN1-208ENST00000557702 PLA2R1Q13018 1463 aa16.02■□□□□ 0.15
PABPN1-208ENST00000557702 ZMYM3Q14202 1370 aa16.01■□□□□ 0.15
PABPN1-208ENST00000557702 MLH3Q9UHC1 1453 aa16■□□□□ 0.15
PABPN1-208ENST00000557702 CDK13Q14004 1512 aaKnown RBP15.99■□□□□ 0.15
PABPN1-208ENST00000557702 CDK11AQ9UQ88 783 aaPredicted RBP15.99■□□□□ 0.15
PABPN1-208ENST00000557702 TCOF1Q13428 1488 aaKnown RBP15.98■□□□□ 0.15
PABPN1-208ENST00000557702 CSRNP3Q8WYN3 585 aa15.98■□□□□ 0.15
PABPN1-208ENST00000557702 MYO5CQ9NQX4 1742 aa15.98■□□□□ 0.15
PABPN1-208ENST00000557702 ARHGAP5Q13017 1502 aa15.97■□□□□ 0.15
PABPN1-208ENST00000557702 ATP1B4Q9UN42 357 aaPredicted RBP15.96■□□□□ 0.15
PABPN1-208ENST00000557702 ABCA6Q8N139 1617 aa15.96■□□□□ 0.15
PABPN1-208ENST00000557702 CPS1P31327 1500 aa15.94■□□□□ 0.14
PABPN1-208ENST00000557702 PTPRKQ15262 1439 aa15.94■□□□□ 0.14
PABPN1-208ENST00000557702 RGS17Q9UGC6 210 aaPredicted RBP15.92■□□□□ 0.14
PABPN1-208ENST00000557702 SENP3Q9H4L4 574 aaPredicted RBP15.91■□□□□ 0.14
PABPN1-208ENST00000557702 MROH2AA6NES4 1674 aa15.91■□□□□ 0.14
PABPN1-208ENST00000557702 CEP170BQ9Y4F5 1589 aaPredicted RBP15.91■□□□□ 0.14
PABPN1-208ENST00000557702 SHANK2Q9UPX8 1470 aa15.9■□□□□ 0.14
PABPN1-208ENST00000557702 ZNF142P52746 1687 aaPredicted RBP15.89■□□□□ 0.13
PABPN1-208ENST00000557702 SUPT6HQ7KZ85 1726 aaKnown RBP15.89■□□□□ 0.13
PABPN1-208ENST00000557702 MYO3AQ8NEV4 1616 aa15.88■□□□□ 0.13
PABPN1-208ENST00000557702 KIF14Q15058 1648 aa15.87■□□□□ 0.13
PABPN1-208ENST00000557702 CLIP1P30622 1438 aa15.86■□□□□ 0.13
PABPN1-208ENST00000557702 TROQ12816 1431 aaPredicted RBP15.86■□□□□ 0.13
PABPN1-208ENST00000557702 KIDINS220Q9ULH0 1771 aa15.85■□□□□ 0.13
PABPN1-208ENST00000557702 GGT6Q6P531 493 aa15.83■□□□□ 0.12
PABPN1-208ENST00000557702 A2ML1A8K2U0 1454 aa15.83■□□□□ 0.12
PABPN1-208ENST00000557702 ANKLE2Q86XL3 938 aa15.82■□□□□ 0.12
PABPN1-208ENST00000557702 ABCC1P33527 1531 aa15.82■□□□□ 0.12
PABPN1-208ENST00000557702 CLTCQ00610 1675 aaKnown RBP15.81■□□□□ 0.12
PABPN1-208ENST00000557702 FMN1Q68DA7 1419 aa15.81■□□□□ 0.12
PABPN1-208ENST00000557702 ALKQ9UM73 1620 aa15.81■□□□□ 0.12
PABPN1-208ENST00000557702 CDC42BPBQ9Y5S2 1711 aa15.8■□□□□ 0.12
PABPN1-208ENST00000557702 SPAG9O60271 1321 aaKnown RBP15.8■□□□□ 0.12
PABPN1-208ENST00000557702 POTEAQ6S8J7 498 aa15.8■□□□□ 0.12
PABPN1-208ENST00000557702 DNMT1P26358 1616 aaKnown RBP15.79■□□□□ 0.12
PABPN1-208ENST00000557702 ITSN2Q9NZM3 1697 aa15.78■□□□□ 0.12
PABPN1-208ENST00000557702 NEURL4Q96JN8 1562 aa15.77■□□□□ 0.11
PABPN1-208ENST00000557702 VWDEQ8N2E2 1590 aa15.76■□□□□ 0.11
PABPN1-208ENST00000557702 ZNF777Q9ULD5 760 aaPredicted RBP15.76■□□□□ 0.11
PABPN1-208ENST00000557702 SAMD9LQ8IVG5 1584 aa15.75■□□□□ 0.11
PABPN1-208ENST00000557702 THEMISQ8N1K5 641 aaPredicted RBP15.75■□□□□ 0.11
PABPN1-208ENST00000557702 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.75■□□□□ 0.113e-10■□□□□ 9.4
PABPN1-208ENST00000557702 POLR1AO95602 1720 aaPredicted RBP15.74■□□□□ 0.11
PABPN1-208ENST00000557702 A2MP01023 1474 aa15.74■□□□□ 0.11
PABPN1-208ENST00000557702 PREX2Q70Z35 1606 aa15.74■□□□□ 0.11
PABPN1-208ENST00000557702 HNRNPMP52272 730 aaKnown RBP eCLIP15.73■□□□□ 0.11
PABPN1-208ENST00000557702 TNRQ92752 1358 aa15.73■□□□□ 0.11
PABPN1-208ENST00000557702 NPHP4O75161 1426 aaPredicted RBP15.72■□□□□ 0.11
PABPN1-208ENST00000557702 FBXO31Q5XUX0 539 aaPredicted RBP15.72■□□□□ 0.11
PABPN1-208ENST00000557702 EEA1Q15075 1411 aa15.71■□□□□ 0.11
PABPN1-208ENST00000557702 LRRC7Q96NW7 1537 aa15.71■□□□□ 0.11
PABPN1-208ENST00000557702 MED14O60244 1454 aa15.7■□□□□ 0.1
PABPN1-208ENST00000557702 PLXNC1O60486 1568 aa15.7■□□□□ 0.1
PABPN1-208ENST00000557702 RNF17Q9BXT8 1623 aaKnown RBP15.68■□□□□ 0.1
PABPN1-208ENST00000557702 ATP7AQ04656 1500 aa15.68■□□□□ 0.1
PABPN1-208ENST00000557702 SYCP2Q9BX26 1530 aa15.66■□□□□ 0.1
PABPN1-208ENST00000557702 FAM135AQ9P2D6 1515 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms