RNA–Protein interactions for RNA: ENST00000557512.5

CGRRF1-208, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 3

Gene CGRRF1, Length 901 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-208ENST00000557512 MAGI2Q86UL8 1455 aa23.32■■□□□ 1.32
CGRRF1-208ENST00000557512 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.32■■□□□ 1.32
CGRRF1-208ENST00000557512 HNRNPUL2Q1KMD3 747 aaKnown RBP23.32■■□□□ 1.32
CGRRF1-208ENST00000557512 UBAP1LF5GYI3 381 aa23.25■■□□□ 1.31
CGRRF1-208ENST00000557512 HECW1Q76N89 1606 aa23.25■■□□□ 1.31
CGRRF1-208ENST00000557512 ATP10AO60312 1499 aa23.22■■□□□ 1.31
CGRRF1-208ENST00000557512 CFAP74Q9C0B2 1584 aa23.21■■□□□ 1.31
CGRRF1-208ENST00000557512 C9orf84Q5VXU9 1444 aa23.19■■□□□ 1.3
CGRRF1-208ENST00000557512 RAPGEF6Q8TEU7 1601 aa23.19■■□□□ 1.3
CGRRF1-208ENST00000557512 PLEKHD1A6NEE1 506 aa23.18■■□□□ 1.3
CGRRF1-208ENST00000557512 NUP153P49790 1475 aaKnown RBP23.17■■□□□ 1.3
CGRRF1-208ENST00000557512 SETD1BQ9UPS6 1966 aaKnown RBP23.17■■□□□ 1.3
CGRRF1-208ENST00000557512 NCOA1Q15788 1441 aa23.16■■□□□ 1.3
CGRRF1-208ENST00000557512 SCAPERQ9BY12 1400 aa23.16■■□□□ 1.3
CGRRF1-208ENST00000557512 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.16■■□□□ 1.3
CGRRF1-208ENST00000557512 MED1Q15648 1581 aaPredicted RBP23.14■■□□□ 1.3
CGRRF1-208ENST00000557512 ZNF335Q9H4Z2 1342 aaPredicted RBP23.13■■□□□ 1.29
CGRRF1-208ENST00000557512 PRXQ9BXM0 1461 aa23.11■■□□□ 1.29
CGRRF1-208ENST00000557512 HSPA1LP34931 641 aa23.1■■□□□ 1.29
CGRRF1-208ENST00000557512 TRAPPC8Q9Y2L5 1435 aa23.08■■□□□ 1.29
CGRRF1-208ENST00000557512 SAMD9Q5K651 1589 aa23.04■■□□□ 1.28
CGRRF1-208ENST00000557512 NCKAP5LQ9HCH0 1330 aa23.04■■□□□ 1.28
CGRRF1-208ENST00000557512 PLCH2O75038 1416 aa23.03■■□□□ 1.28
CGRRF1-208ENST00000557512 C3P01024 1663 aa23.02■■□□□ 1.28
CGRRF1-208ENST00000557512 PHF23Q9BUL5 403 aaPredicted RBP23■■□□□ 1.27
CGRRF1-208ENST00000557512 CAMSAP1Q5T5Y3 1602 aa23■■□□□ 1.27
CGRRF1-208ENST00000557512 PIP4K2BP78356 416 aa22.98■■□□□ 1.27
CGRRF1-208ENST00000557512 SCAF1Q9H7N4 1312 aaKnown RBP22.98■■□□□ 1.27
CGRRF1-208ENST00000557512 AFAP1Q8N556 730 aa22.96■■□□□ 1.27
CGRRF1-208ENST00000557512 ESF1Q9H501 851 aaKnown RBP22.96■■□□□ 1.27
CGRRF1-208ENST00000557512 EFCAB2Q5VUJ9 269 aa22.95■■□□□ 1.26
CGRRF1-208ENST00000557512 ZNF518AQ6AHZ1 1483 aa22.92■■□□□ 1.26
CGRRF1-208ENST00000557512 DIP2CQ9Y2E4 1556 aa22.9■■□□□ 1.26
CGRRF1-208ENST00000557512 PKD2Q13563 968 aa22.9■■□□□ 1.26
CGRRF1-208ENST00000557512 MYT1LQ9UL68 1186 aa22.9■■□□□ 1.26
CGRRF1-208ENST00000557512 REREQ9P2R6 1566 aa22.89■■□□□ 1.26
CGRRF1-208ENST00000557512 KDM5CP41229 1560 aa22.89■■□□□ 1.25
CGRRF1-208ENST00000557512 TOM1O60784 492 aa22.88■■□□□ 1.25
CGRRF1-208ENST00000557512 AGLP35573 1532 aa22.87■■□□□ 1.25
CGRRF1-208ENST00000557512 NPATQ14207 1427 aa22.87■■□□□ 1.25
CGRRF1-208ENST00000557512 CNTLNQ9NXG0 1405 aa22.86■■□□□ 1.25
CGRRF1-208ENST00000557512 RANGAP1P46060 587 aaPredicted RBP22.86■■□□□ 1.25
CGRRF1-208ENST00000557512 TCOF1Q13428 1488 aaKnown RBP22.84■■□□□ 1.25
CGRRF1-208ENST00000557512 PPP6R1Q9UPN7 881 aa22.83■■□□□ 1.25
CGRRF1-208ENST00000557512 PLA2R1Q13018 1463 aa22.83■■□□□ 1.25
CGRRF1-208ENST00000557512 CDK13Q14004 1512 aaKnown RBP22.82■■□□□ 1.24
CGRRF1-208ENST00000557512 MLH3Q9UHC1 1453 aa22.8■■□□□ 1.24
CGRRF1-208ENST00000557512 ABCA6Q8N139 1617 aa22.8■■□□□ 1.24
CGRRF1-208ENST00000557512 ZMYM3Q14202 1370 aa22.79■■□□□ 1.24
CGRRF1-208ENST00000557512 RGS17Q9UGC6 210 aaPredicted RBP22.78■■□□□ 1.24
CGRRF1-208ENST00000557512 MYO5CQ9NQX4 1742 aa22.74■■□□□ 1.23
CGRRF1-208ENST00000557512 ARHGAP5Q13017 1502 aa22.72■■□□□ 1.23
CGRRF1-208ENST00000557512 CPS1P31327 1500 aa22.72■■□□□ 1.23
CGRRF1-208ENST00000557512 CEP170BQ9Y4F5 1589 aaPredicted RBP22.7■■□□□ 1.22
CGRRF1-208ENST00000557512 MROH2AA6NES4 1674 aa22.69■■□□□ 1.22
CGRRF1-208ENST00000557512 ZNF142P52746 1687 aaPredicted RBP22.69■■□□□ 1.22
CGRRF1-208ENST00000557512 ALKQ9UM73 1620 aa22.69■■□□□ 1.22
CGRRF1-208ENST00000557512 SHANK2Q9UPX8 1470 aa22.68■■□□□ 1.22
CGRRF1-208ENST00000557512 PTPRKQ15262 1439 aa22.68■■□□□ 1.22
CGRRF1-208ENST00000557512 SENP3Q9H4L4 574 aaPredicted RBP22.68■■□□□ 1.22
CGRRF1-208ENST00000557512 MYO3AQ8NEV4 1616 aa22.68■■□□□ 1.22
CGRRF1-208ENST00000557512 CSRNP3Q8WYN3 585 aa22.66■■□□□ 1.22
CGRRF1-208ENST00000557512 KIF14Q15058 1648 aa22.66■■□□□ 1.22
CGRRF1-208ENST00000557512 CDK11AQ9UQ88 783 aaPredicted RBP22.62■■□□□ 1.21
CGRRF1-208ENST00000557512 ATP1B4Q9UN42 357 aaPredicted RBP22.61■■□□□ 1.21
CGRRF1-208ENST00000557512 KIDINS220Q9ULH0 1771 aa22.6■■□□□ 1.21
CGRRF1-208ENST00000557512 SUPT6HQ7KZ85 1726 aaKnown RBP22.6■■□□□ 1.21
CGRRF1-208ENST00000557512 POTEAQ6S8J7 498 aa22.59■■□□□ 1.21
CGRRF1-208ENST00000557512 TROQ12816 1431 aaPredicted RBP22.57■■□□□ 1.2
CGRRF1-208ENST00000557512 ABCC1P33527 1531 aa22.57■■□□□ 1.2
CGRRF1-208ENST00000557512 NEURL4Q96JN8 1562 aa22.56■■□□□ 1.2
CGRRF1-208ENST00000557512 A2ML1A8K2U0 1454 aa22.56■■□□□ 1.2
CGRRF1-208ENST00000557512 CLTCQ00610 1675 aaKnown RBP22.55■■□□□ 1.2
CGRRF1-208ENST00000557512 DNMT1P26358 1616 aaKnown RBP22.54■■□□□ 1.2
CGRRF1-208ENST00000557512 VWDEQ8N2E2 1590 aa22.54■■□□□ 1.2
CGRRF1-208ENST00000557512 CDC42BPBQ9Y5S2 1711 aa22.52■■□□□ 1.2
CGRRF1-208ENST00000557512 CLIP1P30622 1438 aa22.5■■□□□ 1.19
CGRRF1-208ENST00000557512 ITSN2Q9NZM3 1697 aa22.5■■□□□ 1.19
CGRRF1-208ENST00000557512 GGT6Q6P531 493 aa22.49■■□□□ 1.19
CGRRF1-208ENST00000557512 SAMD9LQ8IVG5 1584 aa22.47■■□□□ 1.19
CGRRF1-208ENST00000557512 ANKLE2Q86XL3 938 aa22.46■■□□□ 1.19
CGRRF1-208ENST00000557512 SPAG9O60271 1321 aaKnown RBP22.46■■□□□ 1.19
CGRRF1-208ENST00000557512 POLR1AO95602 1720 aaPredicted RBP22.45■■□□□ 1.18
CGRRF1-208ENST00000557512 PREX2Q70Z35 1606 aa22.44■■□□□ 1.18
CGRRF1-208ENST00000557512 LRRC7Q96NW7 1537 aa22.44■■□□□ 1.18
CGRRF1-208ENST00000557512 FMN1Q68DA7 1419 aa22.43■■□□□ 1.18
CGRRF1-208ENST00000557512 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.43■■□□□ 1.18
CGRRF1-208ENST00000557512 PLXNC1O60486 1568 aa22.42■■□□□ 1.18
CGRRF1-208ENST00000557512 NPHP4O75161 1426 aaPredicted RBP22.41■■□□□ 1.18
CGRRF1-208ENST00000557512 A2MP01023 1474 aa22.41■■□□□ 1.18
CGRRF1-208ENST00000557512 SRCAPQ6ZRS2 3230 aa22.4■■□□□ 1.18
CGRRF1-208ENST00000557512 FBXO31Q5XUX0 539 aaPredicted RBP22.4■■□□□ 1.18
CGRRF1-208ENST00000557512 MED14O60244 1454 aa22.4■■□□□ 1.18
CGRRF1-208ENST00000557512 TNRQ92752 1358 aa22.39■■□□□ 1.18
CGRRF1-208ENST00000557512 HNRNPMP52272 730 aaKnown RBP eCLIP22.38■■□□□ 1.17
CGRRF1-208ENST00000557512 RNF17Q9BXT8 1623 aaKnown RBP22.38■■□□□ 1.17
CGRRF1-208ENST00000557512 THEMISQ8N1K5 641 aaPredicted RBP22.37■■□□□ 1.17
CGRRF1-208ENST00000557512 ZNF777Q9ULD5 760 aaPredicted RBP22.37■■□□□ 1.17
CGRRF1-208ENST00000557512 SETD1AO15047 1707 aaKnown RBP22.35■■□□□ 1.17
CGRRF1-208ENST00000557512 ATP7AQ04656 1500 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms