RNA–Protein interactions for RNA: ENST00000557294.5

PRKCH-223, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-223ENST00000557294 PLCH2O75038 1416 aa30.98■■■□□ 2.55
PRKCH-223ENST00000557294 ATP10AO60312 1499 aa30.96■■■□□ 2.55
PRKCH-223ENST00000557294 FER1L4A9Z1Z3 1794 aa30.95■■■□□ 2.55
PRKCH-223ENST00000557294 CEBPAP49715 358 aaPredicted RBP30.95■■■□□ 2.55
PRKCH-223ENST00000557294 ILDR2Q71H61 639 aa30.94■■■□□ 2.54
PRKCH-223ENST00000557294 ARHGEF12Q9NZN5 1544 aa30.93■■■□□ 2.54
PRKCH-223ENST00000557294 DISP3Q9P2K9 1392 aa30.93■■■□□ 2.54
PRKCH-223ENST00000557294 SOCS7O14512 581 aa30.91■■■□□ 2.54
PRKCH-223ENST00000557294 EFCAB2Q5VUJ9 269 aa30.91■■■□□ 2.54
PRKCH-223ENST00000557294 C9orf84Q5VXU9 1444 aa30.9■■■□□ 2.54
PRKCH-223ENST00000557294 EEA1Q15075 1411 aa30.88■■■□□ 2.53
PRKCH-223ENST00000557294 PREX1Q8TCU6 1659 aa30.87■■■□□ 2.53
PRKCH-223ENST00000557294 CDK13Q14004 1512 aaKnown RBP30.83■■■□□ 2.53
PRKCH-223ENST00000557294 UHRF1BP1Q6BDS2 1440 aa30.8■■■□□ 2.52
PRKCH-223ENST00000557294 STRCQ7RTU9 1775 aa30.79■■■□□ 2.52
PRKCH-223ENST00000557294 AFAP1Q8N556 730 aa30.78■■■□□ 2.52
PRKCH-223ENST00000557294 CDK11AQ9UQ88 783 aaPredicted RBP30.78■■■□□ 2.52
PRKCH-223ENST00000557294 ATP1B4Q9UN42 357 aaPredicted RBP30.75■■■□□ 2.51
PRKCH-223ENST00000557294 SETD1BQ9UPS6 1966 aaKnown RBP30.75■■■□□ 2.51
PRKCH-223ENST00000557294 ZNF518AQ6AHZ1 1483 aa30.75■■■□□ 2.51
PRKCH-223ENST00000557294 PTPRTO14522 1441 aa30.73■■■□□ 2.51
PRKCH-223ENST00000557294 MYT1LQ9UL68 1186 aa30.7■■■□□ 2.51
PRKCH-223ENST00000557294 MYO5CQ9NQX4 1742 aa30.68■■■□□ 2.5
PRKCH-223ENST00000557294 KDM5CP41229 1560 aa30.66■■■□□ 2.5
PRKCH-223ENST00000557294 FMN1Q68DA7 1419 aa30.66■■■□□ 2.5
PRKCH-223ENST00000557294 ESF1Q9H501 851 aaKnown RBP30.64■■■□□ 2.5
PRKCH-223ENST00000557294 ARHGAP5Q13017 1502 aa30.62■■■□□ 2.49
PRKCH-223ENST00000557294 REREQ9P2R6 1566 aa30.62■■■□□ 2.49
PRKCH-223ENST00000557294 TROQ12816 1431 aaPredicted RBP30.61■■■□□ 2.49
PRKCH-223ENST00000557294 TRAPPC8Q9Y2L5 1435 aa30.61■■■□□ 2.49
PRKCH-223ENST00000557294 MLH3Q9UHC1 1453 aa30.6■■■□□ 2.49
PRKCH-223ENST00000557294 DIP2CQ9Y2E4 1556 aa30.6■■■□□ 2.49
PRKCH-223ENST00000557294 KIF14Q15058 1648 aa30.58■■■□□ 2.49
PRKCH-223ENST00000557294 LTBP4Q8N2S1 1624 aa30.58■■■□□ 2.49
PRKCH-223ENST00000557294 SPATA31D1Q6ZQQ2 1576 aa30.57■■■□□ 2.48
PRKCH-223ENST00000557294 UBTFP17480 764 aaKnown RBP30.56■■■□□ 2.48
PRKCH-223ENST00000557294 AGLP35573 1532 aa30.56■■■□□ 2.48
PRKCH-223ENST00000557294 IQSEC2Q5JU85 1478 aa30.56■■■□□ 2.48
PRKCH-223ENST00000557294 C3P01024 1663 aa30.55■■■□□ 2.48
PRKCH-223ENST00000557294 CLIP1P30622 1438 aa30.55■■■□□ 2.48
PRKCH-223ENST00000557294 ARHGAP35Q9NRY4 1499 aa30.51■■■□□ 2.48
PRKCH-223ENST00000557294 NCOA1Q15788 1441 aa30.51■■■□□ 2.47
PRKCH-223ENST00000557294 ABCA6Q8N139 1617 aa30.5■■■□□ 2.47
PRKCH-223ENST00000557294 CNTLNQ9NXG0 1405 aa30.48■■■□□ 2.47
PRKCH-223ENST00000557294 EHMT2Q96KQ7 1210 aa30.46■■■□□ 2.47
PRKCH-223ENST00000557294 CDC42BPBQ9Y5S2 1711 aa30.44■■■□□ 2.46
PRKCH-223ENST00000557294 NPATQ14207 1427 aa30.41■■■□□ 2.46
PRKCH-223ENST00000557294 ZMYM3Q14202 1370 aa30.4■■■□□ 2.46
PRKCH-223ENST00000557294 ABCC1P33527 1531 aa30.39■■■□□ 2.46
PRKCH-223ENST00000557294 NCKAP5LQ9HCH0 1330 aa30.38■■■□□ 2.45
PRKCH-223ENST00000557294 CAMSAP1Q5T5Y3 1602 aa30.37■■■□□ 2.45
PRKCH-223ENST00000557294 UBAP1LF5GYI3 381 aa30.36■■■□□ 2.45
PRKCH-223ENST00000557294 KIDINS220Q9ULH0 1771 aa30.36■■■□□ 2.45
PRKCH-223ENST00000557294 PREX2Q70Z35 1606 aa30.34■■■□□ 2.45
PRKCH-223ENST00000557294 ZNF335Q9H4Z2 1342 aaPredicted RBP30.34■■■□□ 2.45
PRKCH-223ENST00000557294 PKD2Q13563 968 aa30.32■■■□□ 2.44
PRKCH-223ENST00000557294 LRRIQ1Q96JM4 1722 aa30.32■■■□□ 2.44
PRKCH-223ENST00000557294 ITSN2Q9NZM3 1697 aa30.32■■■□□ 2.44
PRKCH-223ENST00000557294 MROH2AA6NES4 1674 aa30.28■■■□□ 2.44
PRKCH-223ENST00000557294 ZNF777Q9ULD5 760 aaPredicted RBP30.27■■■□□ 2.44
PRKCH-223ENST00000557294 SPAG9O60271 1321 aaKnown RBP30.26■■■□□ 2.44
PRKCH-223ENST00000557294 CCDC18Q5T9S5 1454 aa30.25■■■□□ 2.43
PRKCH-223ENST00000557294 CASKIN1Q8WXD9 1431 aa30.25■■■□□ 2.43
PRKCH-223ENST00000557294 SAMD9LQ8IVG5 1584 aa30.24■■■□□ 2.43
PRKCH-223ENST00000557294 PLA2R1Q13018 1463 aa30.24■■■□□ 2.43
PRKCH-223ENST00000557294 HNRNPMP52272 730 aaKnown RBP eCLIP30.23■■■□□ 2.43
PRKCH-223ENST00000557294 TCOF1Q13428 1488 aaKnown RBP30.19■■■□□ 2.42
PRKCH-223ENST00000557294 CDC42BPAQ5VT25 1732 aa30.19■■■□□ 2.42
PRKCH-223ENST00000557294 PTPRKQ15262 1439 aa30.19■■■□□ 2.42
PRKCH-223ENST00000557294 PPP6R1Q9UPN7 881 aa30.18■■■□□ 2.42
PRKCH-223ENST00000557294 GGT6Q6P531 493 aa30.17■■■□□ 2.42
PRKCH-223ENST00000557294 GPATCH8Q9UKJ3 1502 aaKnown RBP30.15■■■□□ 2.42
PRKCH-223ENST00000557294 SUPT6HQ7KZ85 1726 aaKnown RBP30.14■■■□□ 2.42
PRKCH-223ENST00000557294 KIAA1107Q9UPP5 1409 aa30.13■■■□□ 2.41
PRKCH-223ENST00000557294 SYCP2Q9BX26 1530 aa30.13■■■□□ 2.41
PRKCH-223ENST00000557294 A2MP01023 1474 aa30.12■■■□□ 2.41
PRKCH-223ENST00000557294 CEP170BQ9Y4F5 1589 aaPredicted RBP30.12■■■□□ 2.41
PRKCH-223ENST00000557294 ZNF142P52746 1687 aaPredicted RBP30.12■■■□□ 2.41
PRKCH-223ENST00000557294 CLTCQ00610 1675 aaKnown RBP30.12■■■□□ 2.41
PRKCH-223ENST00000557294 MYO3AQ8NEV4 1616 aa30.11■■■□□ 2.41
PRKCH-223ENST00000557294 CFDP1Q9UEE9 299 aaPredicted RBP30.1■■■□□ 2.41
PRKCH-223ENST00000557294 ATP7AQ04656 1500 aa30.1■■■□□ 2.41
PRKCH-223ENST00000557294 HSPA1LP34931 641 aa30.09■■■□□ 2.41
PRKCH-223ENST00000557294 PLXNC1O60486 1568 aa30.08■■■□□ 2.41
PRKCH-223ENST00000557294 PLEKHH2Q8IVE3 1493 aa30.06■■■□□ 2.4
PRKCH-223ENST00000557294 TOM1O60784 492 aa30.06■■■□□ 2.4
PRKCH-223ENST00000557294 PIP4K2BP78356 416 aa30.03■■■□□ 2.4
PRKCH-223ENST00000557294 A2ML1A8K2U0 1454 aa30.03■■■□□ 2.4
PRKCH-223ENST00000557294 FYCO1Q9BQS8 1478 aa30.03■■■□□ 2.4
PRKCH-223ENST00000557294 INO80Q9ULG1 1556 aaPredicted RBP30.03■■■□□ 2.4
PRKCH-223ENST00000557294 SCAF1Q9H7N4 1312 aaKnown RBP30.02■■■□□ 2.4
PRKCH-223ENST00000557294 CCNB3Q8WWL7 1395 aa30■■■□□ 2.39
PRKCH-223ENST00000557294 DNMT1P26358 1616 aaKnown RBP29.97■■■□□ 2.39
PRKCH-223ENST00000557294 CHIC1Q5VXU3 224 aa29.96■■■□□ 2.39
PRKCH-223ENST00000557294 CPS1P31327 1500 aa29.96■■■□□ 2.39
PRKCH-223ENST00000557294 MED1Q15648 1581 aaPredicted RBP29.94■■■□□ 2.38
PRKCH-223ENST00000557294 SHANK2Q9UPX8 1470 aa29.94■■■□□ 2.38
PRKCH-223ENST00000557294 FBXO31Q5XUX0 539 aaPredicted RBP29.92■■■□□ 2.38
PRKCH-223ENST00000557294 DHX29Q7Z478 1369 aaKnown RBP29.91■■■□□ 2.38
PRKCH-223ENST00000557294 ANKLE2Q86XL3 938 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms