RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 CEBPAP49715 358 aaPredicted RBP21.28■■□□□ 1
PSEN1-221ENST00000557293 PLCH2O75038 1416 aa21.28■■□□□ 1
PSEN1-221ENST00000557293 ARHGEF12Q9NZN5 1544 aa21.26■□□□□ 0.99
PSEN1-221ENST00000557293 ATP10AO60312 1499 aa21.26■□□□□ 0.99
PSEN1-221ENST00000557293 FER1L4A9Z1Z3 1794 aa21.24■□□□□ 0.99
PSEN1-221ENST00000557293 CDK13Q14004 1512 aaKnown RBP21.24■□□□□ 0.99
PSEN1-221ENST00000557293 STRCQ7RTU9 1775 aa21.19■□□□□ 0.98
PSEN1-221ENST00000557293 EFCAB2Q5VUJ9 269 aa21.19■□□□□ 0.98
PSEN1-221ENST00000557293 C9orf84Q5VXU9 1444 aa21.19■□□□□ 0.98
PSEN1-221ENST00000557293 DISP3Q9P2K9 1392 aa21.17■□□□□ 0.98
PSEN1-221ENST00000557293 EEA1Q15075 1411 aa21.17■□□□□ 0.98
PSEN1-221ENST00000557293 PREX1Q8TCU6 1659 aa21.16■□□□□ 0.98
PSEN1-221ENST00000557293 SOCS7O14512 581 aa21.16■□□□□ 0.98
PSEN1-221ENST00000557293 DMRT2Q9Y5R5 561 aa21.16■□□□□ 0.98
PSEN1-221ENST00000557293 AFAP1Q8N556 730 aa21.15■□□□□ 0.98
PSEN1-221ENST00000557293 SETD1BQ9UPS6 1966 aaKnown RBP21.11■□□□□ 0.97
PSEN1-221ENST00000557293 UHRF1BP1Q6BDS2 1440 aa21.09■□□□□ 0.97
PSEN1-221ENST00000557293 PTPRTO14522 1441 aa21.08■□□□□ 0.97
PSEN1-221ENST00000557293 KDM5CP41229 1560 aa21.07■□□□□ 0.96
PSEN1-221ENST00000557293 ATP1B4Q9UN42 357 aaPredicted RBP21.07■□□□□ 0.96
PSEN1-221ENST00000557293 ZNF518AQ6AHZ1 1483 aa21.07■□□□□ 0.96
PSEN1-221ENST00000557293 KIF14Q15058 1648 aa21.06■□□□□ 0.96
PSEN1-221ENST00000557293 MYO5CQ9NQX4 1742 aa21.06■□□□□ 0.96
PSEN1-221ENST00000557293 CDK11AQ9UQ88 783 aaPredicted RBP21.04■□□□□ 0.96
PSEN1-221ENST00000557293 DIP2CQ9Y2E4 1556 aa21.04■□□□□ 0.96
PSEN1-221ENST00000557293 LTBP4Q8N2S1 1624 aa21.04■□□□□ 0.96
PSEN1-221ENST00000557293 TROQ12816 1431 aaPredicted RBP21.03■□□□□ 0.96
PSEN1-221ENST00000557293 REREQ9P2R6 1566 aa21.02■□□□□ 0.95
PSEN1-221ENST00000557293 ARHGAP35Q9NRY4 1499 aa21.01■□□□□ 0.95
PSEN1-221ENST00000557293 FMN1Q68DA7 1419 aa21.01■□□□□ 0.95
PSEN1-221ENST00000557293 MLH3Q9UHC1 1453 aa21.01■□□□□ 0.95
PSEN1-221ENST00000557293 C3P01024 1663 aa20.99■□□□□ 0.95
PSEN1-221ENST00000557293 ARHGAP5Q13017 1502 aa20.99■□□□□ 0.95
PSEN1-221ENST00000557293 TRAPPC8Q9Y2L5 1435 aa20.99■□□□□ 0.95
PSEN1-221ENST00000557293 AGLP35573 1532 aa20.99■□□□□ 0.95
PSEN1-221ENST00000557293 MYT1LQ9UL68 1186 aa20.98■□□□□ 0.95
PSEN1-221ENST00000557293 ABCA6Q8N139 1617 aa20.97■□□□□ 0.95
PSEN1-221ENST00000557293 EHMT2Q96KQ7 1210 aa20.96■□□□□ 0.95
PSEN1-221ENST00000557293 CDC42BPBQ9Y5S2 1711 aa20.95■□□□□ 0.94
PSEN1-221ENST00000557293 UBTFP17480 764 aaKnown RBP20.95■□□□□ 0.94
PSEN1-221ENST00000557293 NCOA1Q15788 1441 aa20.95■□□□□ 0.94
PSEN1-221ENST00000557293 SPATA31D1Q6ZQQ2 1576 aa20.93■□□□□ 0.94
PSEN1-221ENST00000557293 LRRIQ1Q96JM4 1722 aa20.92■□□□□ 0.94
PSEN1-221ENST00000557293 IQSEC2Q5JU85 1478 aa20.92■□□□□ 0.94
PSEN1-221ENST00000557293 CLIP1P30622 1438 aa20.9■□□□□ 0.94
PSEN1-221ENST00000557293 ESF1Q9H501 851 aaKnown RBP20.9■□□□□ 0.94
PSEN1-221ENST00000557293 KIDINS220Q9ULH0 1771 aa20.89■□□□□ 0.93
PSEN1-221ENST00000557293 ABCC1P33527 1531 aa20.88■□□□□ 0.93
PSEN1-221ENST00000557293 CNTLNQ9NXG0 1405 aa20.87■□□□□ 0.93
PSEN1-221ENST00000557293 NCKAP5LQ9HCH0 1330 aa20.87■□□□□ 0.93
PSEN1-221ENST00000557293 ZMYM3Q14202 1370 aa20.85■□□□□ 0.93
PSEN1-221ENST00000557293 NPATQ14207 1427 aa20.85■□□□□ 0.93
PSEN1-221ENST00000557293 CAMSAP1Q5T5Y3 1602 aa20.85■□□□□ 0.93
PSEN1-221ENST00000557293 PREX2Q70Z35 1606 aa20.85■□□□□ 0.93
PSEN1-221ENST00000557293 ZNF335Q9H4Z2 1342 aaPredicted RBP20.84■□□□□ 0.93
PSEN1-221ENST00000557293 ITSN2Q9NZM3 1697 aa20.84■□□□□ 0.93
PSEN1-221ENST00000557293 SAMD9LQ8IVG5 1584 aa20.8■□□□□ 0.92
PSEN1-221ENST00000557293 UBAP1LF5GYI3 381 aa20.79■□□□□ 0.92
PSEN1-221ENST00000557293 MROH2AA6NES4 1674 aa20.78■□□□□ 0.92
PSEN1-221ENST00000557293 HNRNPMP52272 730 aaKnown RBP eCLIP20.78■□□□□ 0.92
PSEN1-221ENST00000557293 CASKIN1Q8WXD9 1431 aa20.78■□□□□ 0.92
PSEN1-221ENST00000557293 CDC42BPAQ5VT25 1732 aa20.77■□□□□ 0.92
PSEN1-221ENST00000557293 PKD2Q13563 968 aa20.76■□□□□ 0.91
PSEN1-221ENST00000557293 ZNF777Q9ULD5 760 aaPredicted RBP20.76■□□□□ 0.91
PSEN1-221ENST00000557293 PTPRKQ15262 1439 aa20.75■□□□□ 0.91
PSEN1-221ENST00000557293 SPAG9O60271 1321 aaKnown RBP20.75■□□□□ 0.91
PSEN1-221ENST00000557293 PLA2R1Q13018 1463 aa20.74■□□□□ 0.91
PSEN1-221ENST00000557293 TCOF1Q13428 1488 aaKnown RBP20.74■□□□□ 0.91
PSEN1-221ENST00000557293 GPATCH8Q9UKJ3 1502 aaKnown RBP20.73■□□□□ 0.91
PSEN1-221ENST00000557293 CCDC18Q5T9S5 1454 aa20.73■□□□□ 0.91
PSEN1-221ENST00000557293 SUPT6HQ7KZ85 1726 aaKnown RBP20.71■□□□□ 0.91
PSEN1-221ENST00000557293 SYCP2Q9BX26 1530 aa20.7■□□□□ 0.9
PSEN1-221ENST00000557293 GGT6Q6P531 493 aa20.69■□□□□ 0.9
PSEN1-221ENST00000557293 CLTCQ00610 1675 aaKnown RBP20.69■□□□□ 0.9
PSEN1-221ENST00000557293 PLXNC1O60486 1568 aa20.68■□□□□ 0.9
PSEN1-221ENST00000557293 ZNF142P52746 1687 aaPredicted RBP20.68■□□□□ 0.9
PSEN1-221ENST00000557293 KIAA1107Q9UPP5 1409 aa20.68■□□□□ 0.9
PSEN1-221ENST00000557293 A2MP01023 1474 aa20.68■□□□□ 0.9
PSEN1-221ENST00000557293 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
PSEN1-221ENST00000557293 ATP7AQ04656 1500 aa20.67■□□□□ 0.9
PSEN1-221ENST00000557293 CEP170BQ9Y4F5 1589 aaPredicted RBP20.67■□□□□ 0.9
PSEN1-221ENST00000557293 MYO3AQ8NEV4 1616 aa20.67■□□□□ 0.9
PSEN1-221ENST00000557293 PPP6R1Q9UPN7 881 aa20.66■□□□□ 0.9
PSEN1-221ENST00000557293 HSPA1LP34931 641 aa20.64■□□□□ 0.89
PSEN1-221ENST00000557293 INO80Q9ULG1 1556 aaPredicted RBP20.63■□□□□ 0.89
PSEN1-221ENST00000557293 CFDP1Q9UEE9 299 aaPredicted RBP20.63■□□□□ 0.89
PSEN1-221ENST00000557293 A2ML1A8K2U0 1454 aa20.61■□□□□ 0.89
PSEN1-221ENST00000557293 FYCO1Q9BQS8 1478 aa20.61■□□□□ 0.89
PSEN1-221ENST00000557293 ZNF644Q9H582 1327 aaPredicted RBP20.6■□□□□ 0.89
PSEN1-221ENST00000557293 DNMT1P26358 1616 aaKnown RBP20.6■□□□□ 0.89
PSEN1-221ENST00000557293 PLEKHH2Q8IVE3 1493 aa20.59■□□□□ 0.89
PSEN1-221ENST00000557293 FBXO31Q5XUX0 539 aaPredicted RBP20.59■□□□□ 0.89
PSEN1-221ENST00000557293 PIP4K2BP78356 416 aa20.57■□□□□ 0.88
PSEN1-221ENST00000557293 CCNB3Q8WWL7 1395 aa20.57■□□□□ 0.88
PSEN1-221ENST00000557293 MBD5Q9P267 1494 aa20.56■□□□□ 0.88
PSEN1-221ENST00000557293 TOM1O60784 492 aa20.55■□□□□ 0.88
PSEN1-221ENST00000557293 MED1Q15648 1581 aaPredicted RBP20.55■□□□□ 0.88
PSEN1-221ENST00000557293 NEURL4Q96JN8 1562 aa20.55■□□□□ 0.88
PSEN1-221ENST00000557293 DHX29Q7Z478 1369 aaKnown RBP20.54■□□□□ 0.88
PSEN1-221ENST00000557293 SHANK2Q9UPX8 1470 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms