RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 SCAPERQ9BY12 1400 aa16.25■□□□□ 0.19
RIPK3-205ENST00000557253 CDK13Q14004 1512 aaKnown RBP16.24■□□□□ 0.19
RIPK3-205ENST00000557253 ILDR2Q71H61 639 aa16.23■□□□□ 0.19
RIPK3-205ENST00000557253 PREX1Q8TCU6 1659 aa16.22■□□□□ 0.19
RIPK3-205ENST00000557253 DISP3Q9P2K9 1392 aa16.22■□□□□ 0.19
RIPK3-205ENST00000557253 PLCH2O75038 1416 aa16.21■□□□□ 0.19
RIPK3-205ENST00000557253 ARHGEF12Q9NZN5 1544 aa16.21■□□□□ 0.19
RIPK3-205ENST00000557253 ATP10AO60312 1499 aa16.21■□□□□ 0.19
RIPK3-205ENST00000557253 ATP1B4Q9UN42 357 aaPredicted RBP16.2■□□□□ 0.18
RIPK3-205ENST00000557253 C9orf84Q5VXU9 1444 aa16.19■□□□□ 0.18
RIPK3-205ENST00000557253 STRCQ7RTU9 1775 aa16.18■□□□□ 0.18
RIPK3-205ENST00000557253 EHMT2Q96KQ7 1210 aa16.16■□□□□ 0.18
RIPK3-205ENST00000557253 MYO5CQ9NQX4 1742 aa16.16■□□□□ 0.18
RIPK3-205ENST00000557253 EFCAB2Q5VUJ9 269 aa16.15■□□□□ 0.18
RIPK3-205ENST00000557253 MYT1LQ9UL68 1186 aa16.15■□□□□ 0.18
RIPK3-205ENST00000557253 EEA1Q15075 1411 aa16.14■□□□□ 0.17
RIPK3-205ENST00000557253 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
RIPK3-205ENST00000557253 UHRF1BP1Q6BDS2 1440 aa16.13■□□□□ 0.17
RIPK3-205ENST00000557253 SOCS7O14512 581 aa16.13■□□□□ 0.17
RIPK3-205ENST00000557253 AFAP1Q8N556 730 aa16.13■□□□□ 0.17
RIPK3-205ENST00000557253 KIF14Q15058 1648 aa16.12■□□□□ 0.17
RIPK3-205ENST00000557253 ZNF518AQ6AHZ1 1483 aa16.1■□□□□ 0.17
RIPK3-205ENST00000557253 ARHGAP5Q13017 1502 aa16.09■□□□□ 0.17
RIPK3-205ENST00000557253 DIP2CQ9Y2E4 1556 aa16.08■□□□□ 0.16
RIPK3-205ENST00000557253 C3P01024 1663 aa16.08■□□□□ 0.16
RIPK3-205ENST00000557253 CDK11AQ9UQ88 783 aaPredicted RBP16.07■□□□□ 0.16
RIPK3-205ENST00000557253 KDM5CP41229 1560 aa16.07■□□□□ 0.16
RIPK3-205ENST00000557253 SPATA31D1Q6ZQQ2 1576 aa16.07■□□□□ 0.16
RIPK3-205ENST00000557253 ABCA6Q8N139 1617 aa16.05■□□□□ 0.16
RIPK3-205ENST00000557253 FMN1Q68DA7 1419 aa16.05■□□□□ 0.16
RIPK3-205ENST00000557253 UBTFP17480 764 aaKnown RBP16.05■□□□□ 0.16
RIPK3-205ENST00000557253 ESF1Q9H501 851 aaKnown RBP16.05■□□□□ 0.16
RIPK3-205ENST00000557253 PTPRTO14522 1441 aa16.04■□□□□ 0.16
RIPK3-205ENST00000557253 TROQ12816 1431 aaPredicted RBP16.03■□□□□ 0.16
RIPK3-205ENST00000557253 SETD1BQ9UPS6 1966 aaKnown RBP16.03■□□□□ 0.16
RIPK3-205ENST00000557253 ARHGAP35Q9NRY4 1499 aa16.03■□□□□ 0.16
RIPK3-205ENST00000557253 LRRIQ1Q96JM4 1722 aa16.02■□□□□ 0.16
RIPK3-205ENST00000557253 CDC42BPBQ9Y5S2 1711 aa16.02■□□□□ 0.16
RIPK3-205ENST00000557253 LTBP4Q8N2S1 1624 aa16.02■□□□□ 0.16
RIPK3-205ENST00000557253 REREQ9P2R6 1566 aa16.01■□□□□ 0.15
RIPK3-205ENST00000557253 CLIP1P30622 1438 aa16.01■□□□□ 0.15
RIPK3-205ENST00000557253 MLH3Q9UHC1 1453 aa16■□□□□ 0.15
RIPK3-205ENST00000557253 TRAPPC8Q9Y2L5 1435 aa16■□□□□ 0.15
RIPK3-205ENST00000557253 NCOA1Q15788 1441 aa15.97■□□□□ 0.15
RIPK3-205ENST00000557253 ITSN2Q9NZM3 1697 aa15.97■□□□□ 0.15
RIPK3-205ENST00000557253 AGLP35573 1532 aa15.97■□□□□ 0.15
RIPK3-205ENST00000557253 ABCC1P33527 1531 aa15.96■□□□□ 0.15
RIPK3-205ENST00000557253 PREX2Q70Z35 1606 aa15.96■□□□□ 0.15
RIPK3-205ENST00000557253 KIDINS220Q9ULH0 1771 aa15.95■□□□□ 0.14
RIPK3-205ENST00000557253 CAMSAP1Q5T5Y3 1602 aa15.95■□□□□ 0.14
RIPK3-205ENST00000557253 NCKAP5LQ9HCH0 1330 aa15.94■□□□□ 0.14
RIPK3-205ENST00000557253 IQSEC2Q5JU85 1478 aa15.93■□□□□ 0.14
RIPK3-205ENST00000557253 CNTLNQ9NXG0 1405 aa15.93■□□□□ 0.14
RIPK3-205ENST00000557253 ZNF335Q9H4Z2 1342 aaPredicted RBP15.92■□□□□ 0.14
RIPK3-205ENST00000557253 UBAP1LF5GYI3 381 aa15.91■□□□□ 0.14
RIPK3-205ENST00000557253 ZNF777Q9ULD5 760 aaPredicted RBP15.91■□□□□ 0.14
RIPK3-205ENST00000557253 CDC42BPAQ5VT25 1732 aa15.91■□□□□ 0.14
RIPK3-205ENST00000557253 SUPT6HQ7KZ85 1726 aaKnown RBP15.9■□□□□ 0.14
RIPK3-205ENST00000557253 ZMYM3Q14202 1370 aa15.89■□□□□ 0.13
RIPK3-205ENST00000557253 MROH2AA6NES4 1674 aa15.89■□□□□ 0.13
RIPK3-205ENST00000557253 SAMD9LQ8IVG5 1584 aa15.88■□□□□ 0.13
RIPK3-205ENST00000557253 NPATQ14207 1427 aa15.87■□□□□ 0.13
RIPK3-205ENST00000557253 CLTCQ00610 1675 aaKnown RBP15.87■□□□□ 0.13
RIPK3-205ENST00000557253 HNRNPMP52272 730 aaKnown RBP eCLIP15.86■□□□□ 0.13
RIPK3-205ENST00000557253 CCDC18Q5T9S5 1454 aa15.85■□□□□ 0.13
RIPK3-205ENST00000557253 SYCP2Q9BX26 1530 aa15.85■□□□□ 0.13
RIPK3-205ENST00000557253 MYO3AQ8NEV4 1616 aa15.85■□□□□ 0.13
RIPK3-205ENST00000557253 SPAG9O60271 1321 aaKnown RBP15.85■□□□□ 0.13
RIPK3-205ENST00000557253 CASKIN1Q8WXD9 1431 aa15.85■□□□□ 0.13
RIPK3-205ENST00000557253 PKD2Q13563 968 aa15.82■□□□□ 0.12
RIPK3-205ENST00000557253 GGT6Q6P531 493 aa15.82■□□□□ 0.12
RIPK3-205ENST00000557253 CEP170BQ9Y4F5 1589 aaPredicted RBP15.82■□□□□ 0.12
RIPK3-205ENST00000557253 ZNF142P52746 1687 aaPredicted RBP15.82■□□□□ 0.12
RIPK3-205ENST00000557253 ATP7AQ04656 1500 aa15.81■□□□□ 0.12
RIPK3-205ENST00000557253 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
RIPK3-205ENST00000557253 GPATCH8Q9UKJ3 1502 aaKnown RBP15.8■□□□□ 0.12
RIPK3-205ENST00000557253 PLA2R1Q13018 1463 aa15.8■□□□□ 0.12
RIPK3-205ENST00000557253 PTPRKQ15262 1439 aa15.8■□□□□ 0.12
RIPK3-205ENST00000557253 A2MP01023 1474 aa15.79■□□□□ 0.12
RIPK3-205ENST00000557253 TCOF1Q13428 1488 aaKnown RBP15.79■□□□□ 0.12
RIPK3-205ENST00000557253 PPP6R1Q9UPN7 881 aa15.79■□□□□ 0.12
RIPK3-205ENST00000557253 PIP4K2BP78356 416 aa15.78■□□□□ 0.12
RIPK3-205ENST00000557253 PLXNC1O60486 1568 aa15.78■□□□□ 0.12
RIPK3-205ENST00000557253 INO80Q9ULG1 1556 aaPredicted RBP15.78■□□□□ 0.12
RIPK3-205ENST00000557253 HSPA1LP34931 641 aa15.77■□□□□ 0.12
RIPK3-205ENST00000557253 CFDP1Q9UEE9 299 aaPredicted RBP15.76■□□□□ 0.11
RIPK3-205ENST00000557253 FYCO1Q9BQS8 1478 aa15.75■□□□□ 0.11
RIPK3-205ENST00000557253 DNMT1P26358 1616 aaKnown RBP15.74■□□□□ 0.11
RIPK3-205ENST00000557253 CHIC1Q5VXU3 224 aa15.73■□□□□ 0.11
RIPK3-205ENST00000557253 KIAA1107Q9UPP5 1409 aa15.73■□□□□ 0.11
RIPK3-205ENST00000557253 MED1Q15648 1581 aaPredicted RBP15.73■□□□□ 0.11
RIPK3-205ENST00000557253 CCNB3Q8WWL7 1395 aa15.73■□□□□ 0.11
RIPK3-205ENST00000557253 A2ML1A8K2U0 1454 aa15.72■□□□□ 0.11
RIPK3-205ENST00000557253 ADGBQ8N7X0 1667 aa15.72■□□□□ 0.11
RIPK3-205ENST00000557253 PLEKHH2Q8IVE3 1493 aa15.71■□□□□ 0.11
RIPK3-205ENST00000557253 ZNF644Q9H582 1327 aaPredicted RBP15.7■□□□□ 0.1
RIPK3-205ENST00000557253 TOM1O60784 492 aa15.7■□□□□ 0.1
RIPK3-205ENST00000557253 FBXO31Q5XUX0 539 aaPredicted RBP15.7■□□□□ 0.1
RIPK3-205ENST00000557253 POLR1AO95602 1720 aaPredicted RBP15.7■□□□□ 0.1
RIPK3-205ENST00000557253 NEURL4Q96JN8 1562 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms