RNA–Protein interactions for RNA: ENST00000557058.1

ITGA7-217, Transcript of integrin subunit alpha 7, humanhuman

TSL 5

Gene ITGA7, Length 1,040 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-217ENST00000557058 APLP2Q06481 763 aa23.25■■□□□ 1.31
ITGA7-217ENST00000557058 AKNAQ7Z591 1439 aa23.25■■□□□ 1.31
ITGA7-217ENST00000557058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.24■■□□□ 1.31
ITGA7-217ENST00000557058 CFAP74Q9C0B2 1584 aa23.24■■□□□ 1.31
ITGA7-217ENST00000557058 FMN1Q68DA7 1419 aa23.24■■□□□ 1.31
ITGA7-217ENST00000557058 FANCAO15360 1455 aa23.23■■□□□ 1.31
ITGA7-217ENST00000557058 CASKIN1Q8WXD9 1431 aa23.22■■□□□ 1.31
ITGA7-217ENST00000557058 RICTORQ6R327 1708 aa23.22■■□□□ 1.31
ITGA7-217ENST00000557058 ARHGEF40Q8TER5 1519 aa23.2■■□□□ 1.3
ITGA7-217ENST00000557058 ZMYM4Q5VZL5 1548 aa23.18■■□□□ 1.3
ITGA7-217ENST00000557058 TTC37Q6PGP7 1564 aa23.17■■□□□ 1.3
ITGA7-217ENST00000557058 FYCO1Q9BQS8 1478 aa23.17■■□□□ 1.3
ITGA7-217ENST00000557058 MAGI2Q86UL8 1455 aa23.16■■□□□ 1.3
ITGA7-217ENST00000557058 KANK4Q5T7N3 995 aaPredicted RBP23.14■■□□□ 1.29
ITGA7-217ENST00000557058 PLCH2O75038 1416 aa23.14■■□□□ 1.29
ITGA7-217ENST00000557058 CDK13Q14004 1512 aaKnown RBP23.13■■□□□ 1.29
ITGA7-217ENST00000557058 TIAM1Q13009 1591 aa23.11■■□□□ 1.29
ITGA7-217ENST00000557058 POGZQ7Z3K3 1410 aa23.11■■□□□ 1.29
ITGA7-217ENST00000557058 ZFYVE16Q7Z3T8 1539 aa23.09■■□□□ 1.29
ITGA7-217ENST00000557058 HECW1Q76N89 1606 aa23.08■■□□□ 1.29
ITGA7-217ENST00000557058 CDK11AQ9UQ88 783 aaPredicted RBP23.08■■□□□ 1.29
ITGA7-217ENST00000557058 SIGLEC1Q9BZZ2 1709 aa23.08■■□□□ 1.28
ITGA7-217ENST00000557058 MLECQ14165 292 aa23.06■■□□□ 1.28
ITGA7-217ENST00000557058 STRCQ7RTU9 1775 aa23.06■■□□□ 1.28
ITGA7-217ENST00000557058 SCAPERQ9BY12 1400 aa23.06■■□□□ 1.28
ITGA7-217ENST00000557058 YEATS2Q9ULM3 1422 aa23.06■■□□□ 1.28
ITGA7-217ENST00000557058 EFCAB2Q5VUJ9 269 aa23.04■■□□□ 1.28
ITGA7-217ENST00000557058 LRRC9Q6ZRR7 1453 aa23.04■■□□□ 1.28
ITGA7-217ENST00000557058 MYO5CQ9NQX4 1742 aa23■■□□□ 1.27
ITGA7-217ENST00000557058 FER1L4A9Z1Z3 1794 aa23■■□□□ 1.27
ITGA7-217ENST00000557058 TROQ12816 1431 aaPredicted RBP22.99■■□□□ 1.27
ITGA7-217ENST00000557058 ATP10AO60312 1499 aa22.98■■□□□ 1.27
ITGA7-217ENST00000557058 PREX1Q8TCU6 1659 aa22.98■■□□□ 1.27
ITGA7-217ENST00000557058 ATP1B4Q9UN42 357 aaPredicted RBP22.98■■□□□ 1.27
ITGA7-217ENST00000557058 DMRT2Q9Y5R5 561 aa22.97■■□□□ 1.27
ITGA7-217ENST00000557058 KIF14Q15058 1648 aa22.97■■□□□ 1.27
ITGA7-217ENST00000557058 CEBPAP49715 358 aaPredicted RBP22.96■■□□□ 1.27
ITGA7-217ENST00000557058 C9orf84Q5VXU9 1444 aa22.95■■□□□ 1.26
ITGA7-217ENST00000557058 ZNF518AQ6AHZ1 1483 aa22.94■■□□□ 1.26
ITGA7-217ENST00000557058 ARHGEF12Q9NZN5 1544 aa22.93■■□□□ 1.26
ITGA7-217ENST00000557058 CCDC18Q5T9S5 1454 aa22.93■■□□□ 1.26
ITGA7-217ENST00000557058 LRRIQ1Q96JM4 1722 aa22.92■■□□□ 1.26
ITGA7-217ENST00000557058 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
ITGA7-217ENST00000557058 KDM5CP41229 1560 aa22.91■■□□□ 1.26
ITGA7-217ENST00000557058 ARHGAP5Q13017 1502 aa22.89■■□□□ 1.26
ITGA7-217ENST00000557058 LTBP4Q8N2S1 1624 aa22.89■■□□□ 1.25
ITGA7-217ENST00000557058 REREQ9P2R6 1566 aa22.85■■□□□ 1.25
ITGA7-217ENST00000557058 AFAP1Q8N556 730 aa22.85■■□□□ 1.25
ITGA7-217ENST00000557058 MLH3Q9UHC1 1453 aa22.85■■□□□ 1.25
ITGA7-217ENST00000557058 CDC42BPBQ9Y5S2 1711 aa22.83■■□□□ 1.25
ITGA7-217ENST00000557058 PTPRTO14522 1441 aa22.82■■□□□ 1.24
ITGA7-217ENST00000557058 MTUS2Q5JR59 1369 aa22.81■■□□□ 1.24
ITGA7-217ENST00000557058 DIP2CQ9Y2E4 1556 aa22.8■■□□□ 1.24
ITGA7-217ENST00000557058 PREX2Q70Z35 1606 aa22.8■■□□□ 1.24
ITGA7-217ENST00000557058 EHBP1L1Q8N3D4 1523 aa22.8■■□□□ 1.24
ITGA7-217ENST00000557058 UHRF1BP1Q6BDS2 1440 aa22.8■■□□□ 1.24
ITGA7-217ENST00000557058 CCNB3Q8WWL7 1395 aa22.79■■□□□ 1.24
ITGA7-217ENST00000557058 IQSEC2Q5JU85 1478 aa22.78■■□□□ 1.24
ITGA7-217ENST00000557058 ABCC1P33527 1531 aa22.77■■□□□ 1.24
ITGA7-217ENST00000557058 AGLP35573 1532 aa22.77■■□□□ 1.24
ITGA7-217ENST00000557058 UBAP1LF5GYI3 381 aa22.76■■□□□ 1.23
ITGA7-217ENST00000557058 SETD1BQ9UPS6 1966 aaKnown RBP22.76■■□□□ 1.23
ITGA7-217ENST00000557058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.76■■□□□ 1.23
ITGA7-217ENST00000557058 TRAPPC8Q9Y2L5 1435 aa22.74■■□□□ 1.23
ITGA7-217ENST00000557058 HRCP23327 699 aa22.74■■□□□ 1.23
ITGA7-217ENST00000557058 MYT1LQ9UL68 1186 aa22.74■■□□□ 1.23
ITGA7-217ENST00000557058 ABCA6Q8N139 1617 aa22.74■■□□□ 1.23
ITGA7-217ENST00000557058 NCOA2Q15596 1464 aa22.73■■□□□ 1.23
ITGA7-217ENST00000557058 ITSN2Q9NZM3 1697 aa22.73■■□□□ 1.23
ITGA7-217ENST00000557058 CDC42BPAQ5VT25 1732 aa22.71■■□□□ 1.23
ITGA7-217ENST00000557058 SUPT6HQ7KZ85 1726 aaKnown RBP22.71■■□□□ 1.23
ITGA7-217ENST00000557058 MED1Q15648 1581 aaPredicted RBP22.69■■□□□ 1.22
ITGA7-217ENST00000557058 KIDINS220Q9ULH0 1771 aa22.68■■□□□ 1.22
ITGA7-217ENST00000557058 MYOM3Q5VTT5 1437 aa22.65■■□□□ 1.22
ITGA7-217ENST00000557058 FGD6Q6ZV73 1430 aa22.65■■□□□ 1.22
ITGA7-217ENST00000557058 CNTLNQ9NXG0 1405 aa22.65■■□□□ 1.22
ITGA7-217ENST00000557058 GPATCH8Q9UKJ3 1502 aaKnown RBP22.65■■□□□ 1.22
ITGA7-217ENST00000557058 C3P01024 1663 aa22.65■■□□□ 1.22
ITGA7-217ENST00000557058 ESF1Q9H501 851 aaKnown RBP22.64■■□□□ 1.21
ITGA7-217ENST00000557058 SAMD9LQ8IVG5 1584 aa22.63■■□□□ 1.21
ITGA7-217ENST00000557058 ZNF335Q9H4Z2 1342 aaPredicted RBP22.63■■□□□ 1.21
ITGA7-217ENST00000557058 NCOA1Q15788 1441 aa22.63■■□□□ 1.21
ITGA7-217ENST00000557058 KIAA1107Q9UPP5 1409 aa22.63■■□□□ 1.21
ITGA7-217ENST00000557058 HSPA1LP34931 641 aa22.61■■□□□ 1.21
ITGA7-217ENST00000557058 PLEKHH2Q8IVE3 1493 aa22.6■■□□□ 1.21
ITGA7-217ENST00000557058 MIA2Q96PC5 1412 aa22.59■■□□□ 1.21
ITGA7-217ENST00000557058 SYCP2Q9BX26 1530 aa22.58■■□□□ 1.21
ITGA7-217ENST00000557058 ZNF777Q9ULD5 760 aaPredicted RBP22.58■■□□□ 1.21
ITGA7-217ENST00000557058 TCOF1Q13428 1488 aaKnown RBP22.58■■□□□ 1.2
ITGA7-217ENST00000557058 SPAG9O60271 1321 aaKnown RBP22.57■■□□□ 1.2
ITGA7-217ENST00000557058 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
ITGA7-217ENST00000557058 NCKAP5LQ9HCH0 1330 aa22.57■■□□□ 1.2
ITGA7-217ENST00000557058 MROH2AA6NES4 1674 aa22.56■■□□□ 1.2
ITGA7-217ENST00000557058 CFDP1Q9UEE9 299 aaPredicted RBP22.56■■□□□ 1.2
ITGA7-217ENST00000557058 NPATQ14207 1427 aa22.56■■□□□ 1.2
ITGA7-217ENST00000557058 HNRNPMP52272 730 aaKnown RBP eCLIP22.55■■□□□ 1.2
ITGA7-217ENST00000557058 CAMSAP1Q5T5Y3 1602 aa22.53■■□□□ 1.2
ITGA7-217ENST00000557058 ATP7AQ04656 1500 aa22.53■■□□□ 1.2
ITGA7-217ENST00000557058 ZEB1P37275 1124 aaPredicted RBP22.53■■□□□ 1.2
ITGA7-217ENST00000557058 PIP4K2BP78356 416 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms