RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 IQGAP2Q13576 1575 aa21.03■□□□□ 0.96
TMEM55B-207ENST00000557041 CCDC184Q52MB2 194 aa21.02■□□□□ 0.95
TMEM55B-207ENST00000557041 PLB1Q6P1J6 1458 aa21.01■□□□□ 0.95
TMEM55B-207ENST00000557041 C11orf95C9JLR9 678 aaPredicted RBP21.01■□□□□ 0.95
TMEM55B-207ENST00000557041 EHBP1L1Q8N3D4 1523 aa21.01■□□□□ 0.95
TMEM55B-207ENST00000557041 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.01■□□□□ 0.95
TMEM55B-207ENST00000557041 CTTNBP2Q8WZ74 1663 aa20.99■□□□□ 0.95
TMEM55B-207ENST00000557041 IFT140Q96RY7 1462 aa20.99■□□□□ 0.95
TMEM55B-207ENST00000557041 TMC1Q8TDI8 760 aa20.98■□□□□ 0.95
TMEM55B-207ENST00000557041 THOC2Q8NI27 1593 aaKnown RBP20.98■□□□□ 0.95
TMEM55B-207ENST00000557041 SUPT6HQ7KZ85 1726 aaKnown RBP20.98■□□□□ 0.95
TMEM55B-207ENST00000557041 PTPN23Q9H3S7 1636 aa20.97■□□□□ 0.95
TMEM55B-207ENST00000557041 CFAP43Q8NDM7 1665 aa20.95■□□□□ 0.95
TMEM55B-207ENST00000557041 MAGI3Q5TCQ9 1506 aa20.95■□□□□ 0.94
TMEM55B-207ENST00000557041 ANKRD30AQ9BXX3 1397 aa20.93■□□□□ 0.94
TMEM55B-207ENST00000557041 KIAA0586Q9BVV6 1533 aa20.93■□□□□ 0.94
TMEM55B-207ENST00000557041 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
TMEM55B-207ENST00000557041 PTPRGP23470 1445 aa20.91■□□□□ 0.94
TMEM55B-207ENST00000557041 HECW1Q76N89 1606 aa20.9■□□□□ 0.94
TMEM55B-207ENST00000557041 ERICH6Q7L0X2 663 aa20.9■□□□□ 0.94
TMEM55B-207ENST00000557041 TSHZ2Q9NRE2 1034 aa20.9■□□□□ 0.94
TMEM55B-207ENST00000557041 DAPK1P53355 1430 aa20.9■□□□□ 0.94
TMEM55B-207ENST00000557041 GRIN2AQ12879 1464 aa20.89■□□□□ 0.94
TMEM55B-207ENST00000557041 CHGAP10645 457 aaKnown RBP20.89■□□□□ 0.93
TMEM55B-207ENST00000557041 PRKRIP1Q9H875 184 aaPredicted RBP20.89■□□□□ 0.93
TMEM55B-207ENST00000557041 ABCC5O15440 1437 aa20.88■□□□□ 0.93
TMEM55B-207ENST00000557041 ST20-MTHFSA0A0A6YYL1 179 aa20.87■□□□□ 0.93
TMEM55B-207ENST00000557041 KIF7Q2M1P5 1343 aa20.87■□□□□ 0.93
TMEM55B-207ENST00000557041 MIA2Q96PC5 1412 aa20.86■□□□□ 0.93
TMEM55B-207ENST00000557041 UGGT2Q9NYU1 1516 aa20.86■□□□□ 0.93
TMEM55B-207ENST00000557041 TARBP1Q13395 1621 aaKnown RBP20.84■□□□□ 0.93
TMEM55B-207ENST00000557041 B4GALNT3Q6L9W6 998 aa20.84■□□□□ 0.93
TMEM55B-207ENST00000557041 TROQ12816 1431 aaPredicted RBP20.84■□□□□ 0.93
TMEM55B-207ENST00000557041 NUP153P49790 1475 aaKnown RBP20.83■□□□□ 0.92
TMEM55B-207ENST00000557041 CC2D1BQ5T0F9 858 aaKnown RBP20.81■□□□□ 0.92
TMEM55B-207ENST00000557041 ANKRD50Q9ULJ7 1429 aa20.81■□□□□ 0.92
TMEM55B-207ENST00000557041 SAMD9Q5K651 1589 aa20.81■□□□□ 0.92
TMEM55B-207ENST00000557041 CCDC7Q96M83 1385 aa20.81■□□□□ 0.92
TMEM55B-207ENST00000557041 ADAMTS12P58397 1594 aa20.79■□□□□ 0.92
TMEM55B-207ENST00000557041 ANKRD30BQ9BXX2 1392 aa20.79■□□□□ 0.92
TMEM55B-207ENST00000557041 USP47Q96K76 1375 aa20.78■□□□□ 0.92
TMEM55B-207ENST00000557041 KIF15Q9NS87 1388 aa20.77■□□□□ 0.92
TMEM55B-207ENST00000557041 ARHGEF11O15085 1522 aa20.76■□□□□ 0.91
TMEM55B-207ENST00000557041 DISP1Q96F81 1524 aa20.76■□□□□ 0.91
TMEM55B-207ENST00000557041 KDM6BO15054 1643 aa20.73■□□□□ 0.91
TMEM55B-207ENST00000557041 ROCK2O75116 1388 aaKnown RBP20.73■□□□□ 0.91
TMEM55B-207ENST00000557041 SYNJ2O15056 1496 aa20.73■□□□□ 0.91
TMEM55B-207ENST00000557041 WDR62O43379 1518 aa20.72■□□□□ 0.91
TMEM55B-207ENST00000557041 NCOA1Q15788 1441 aa20.72■□□□□ 0.91
TMEM55B-207ENST00000557041 CAMSAP2Q08AD1 1489 aa20.71■□□□□ 0.91
TMEM55B-207ENST00000557041 NBPF1Q3BBV0 1214 aa20.71■□□□□ 0.91
TMEM55B-207ENST00000557041 PBRM1Q86U86 1689 aa20.71■□□□□ 0.91
TMEM55B-207ENST00000557041 AFAP1Q8N556 730 aa20.69■□□□□ 0.9
TMEM55B-207ENST00000557041 GPATCH8Q9UKJ3 1502 aaKnown RBP20.69■□□□□ 0.9
TMEM55B-207ENST00000557041 RBM19Q9Y4C8 960 aaKnown RBP20.68■□□□□ 0.9
TMEM55B-207ENST00000557041 C9orf84Q5VXU9 1444 aa20.68■□□□□ 0.9
TMEM55B-207ENST00000557041 CNTLNQ9NXG0 1405 aa20.68■□□□□ 0.9
TMEM55B-207ENST00000557041 EFCAB2Q5VUJ9 269 aa20.67■□□□□ 0.9
TMEM55B-207ENST00000557041 CCDC136Q96JN2 1154 aa20.67■□□□□ 0.9
TMEM55B-207ENST00000557041 EIF4G3O43432 1585 aaKnown RBP20.67■□□□□ 0.9
TMEM55B-207ENST00000557041 AKNAQ7Z591 1439 aa20.67■□□□□ 0.9
TMEM55B-207ENST00000557041 ROCK1Q13464 1354 aa20.66■□□□□ 0.9
TMEM55B-207ENST00000557041 NPM1P06748 294 aaKnown RBP eCLIP20.66■□□□□ 0.9
TMEM55B-207ENST00000557041 KIAA0556O60303 1618 aa20.65■□□□□ 0.9
TMEM55B-207ENST00000557041 MAGI1Q96QZ7 1491 aaPredicted RBP20.64■□□□□ 0.9
TMEM55B-207ENST00000557041 KIAA1107Q9UPP5 1409 aa20.64■□□□□ 0.89
TMEM55B-207ENST00000557041 TCOF1Q13428 1488 aaKnown RBP20.63■□□□□ 0.89
TMEM55B-207ENST00000557041 KIF3BO15066 747 aa20.62■□□□□ 0.89
TMEM55B-207ENST00000557041 RAPGEF6Q8TEU7 1601 aa20.62■□□□□ 0.89
TMEM55B-207ENST00000557041 LRRIQ1Q96JM4 1722 aa20.62■□□□□ 0.89
TMEM55B-207ENST00000557041 ATP10BO94823 1461 aa20.62■□□□□ 0.89
TMEM55B-207ENST00000557041 RPRD2Q5VT52 1461 aaKnown RBP20.61■□□□□ 0.89
TMEM55B-207ENST00000557041 CCDC144AA2RUR9 1427 aa20.6■□□□□ 0.89
TMEM55B-207ENST00000557041 SPAG9O60271 1321 aaKnown RBP20.59■□□□□ 0.89
TMEM55B-207ENST00000557041 GGT6Q6P531 493 aa20.58■□□□□ 0.89
TMEM55B-207ENST00000557041 PPP4R2Q9NY27 417 aa20.58■□□□□ 0.89
TMEM55B-207ENST00000557041 TNNT2P45379 298 aaPredicted RBP20.56■□□□□ 0.88
TMEM55B-207ENST00000557041 NPM2Q86SE8 214 aaKnown RBP20.56■□□□□ 0.88
TMEM55B-207ENST00000557041 NUTM2DQ5VT03 806 aaPredicted RBP20.55■□□□□ 0.88
TMEM55B-207ENST00000557041 DENND4BO75064 1496 aaPredicted RBP20.55■□□□□ 0.88
TMEM55B-207ENST00000557041 RSPH4AQ5TD94 716 aa20.54■□□□□ 0.88
TMEM55B-207ENST00000557041 PANK3Q9H999 370 aa20.54■□□□□ 0.88
TMEM55B-207ENST00000557041 CEP170Q5SW79 1584 aa20.54■□□□□ 0.88
TMEM55B-207ENST00000557041 KIF14Q15058 1648 aa20.53■□□□□ 0.88
TMEM55B-207ENST00000557041 ARHGAP5Q13017 1502 aa20.53■□□□□ 0.88
TMEM55B-207ENST00000557041 KNSTRNQ9Y448 316 aa20.52■□□□□ 0.88
TMEM55B-207ENST00000557041 TMF1P82094 1093 aa20.52■□□□□ 0.88
TMEM55B-207ENST00000557041 ZBED9Q6R2W3 1325 aa20.51■□□□□ 0.87
TMEM55B-207ENST00000557041 WDR43Q15061 677 aaKnown RBP eCLIP20.5■□□□□ 0.87
TMEM55B-207ENST00000557041 PZPP20742 1482 aa20.48■□□□□ 0.87
TMEM55B-207ENST00000557041 SAFB2Q14151 953 aaKnown RBP eCLIP20.48■□□□□ 0.87
TMEM55B-207ENST00000557041 NUDCQ9Y266 331 aa20.45■□□□□ 0.86
TMEM55B-207ENST00000557041 MYT1Q01538 1121 aa20.45■□□□□ 0.86
TMEM55B-207ENST00000557041 NEUROD2Q15784 382 aa20.45■□□□□ 0.86
TMEM55B-207ENST00000557041 KTN1Q86UP2 1357 aaKnown RBP20.44■□□□□ 0.86
TMEM55B-207ENST00000557041 NUP160Q12769 1436 aa20.44■□□□□ 0.86
TMEM55B-207ENST00000557041 PLIN1O60240 522 aa20.42■□□□□ 0.86
TMEM55B-207ENST00000557041 DNMT1P26358 1616 aaKnown RBP20.42■□□□□ 0.86
TMEM55B-207ENST00000557041 PNISRQ8TF01 805 aaKnown RBP20.41■□□□□ 0.86
TMEM55B-207ENST00000557041 RALBP1Q15311 655 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms