RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 GOLGA2Q08379 1002 aa13.67□□□□□ -0.22
SPTB-208ENST00000556626 CSPP1Q1MSJ5 1256 aa13.66□□□□□ -0.22
SPTB-208ENST00000556626 TSHZ2Q9NRE2 1034 aa13.65□□□□□ -0.22
SPTB-208ENST00000556626 A0A0U1RQG5 324 aaPredicted RBP13.64□□□□□ -0.23
SPTB-208ENST00000556626 DDX11L8A8MPP1 907 aa13.64□□□□□ -0.23
SPTB-208ENST00000556626 VSIG10Q8N0Z9 540 aa13.64□□□□□ -0.23
SPTB-208ENST00000556626 KTN1Q86UP2 1357 aaKnown RBP13.63□□□□□ -0.23
SPTB-208ENST00000556626 RCAN3Q9UKA8 241 aa13.63□□□□□ -0.23
SPTB-208ENST00000556626 CLSTN1O94985 981 aa13.62□□□□□ -0.23
SPTB-208ENST00000556626 HAP1P54257 671 aaPredicted RBP13.62□□□□□ -0.23
SPTB-208ENST00000556626 CALD1Q05682 793 aaKnown RBP13.62□□□□□ -0.23
SPTB-208ENST00000556626 IPO8O15397 1037 aaKnown RBP13.62□□□□□ -0.23
SPTB-208ENST00000556626 RB1CC1Q8TDY2 1594 aa13.62□□□□□ -0.23
SPTB-208ENST00000556626 CCNB3Q8WWL7 1395 aa13.62□□□□□ -0.23
SPTB-208ENST00000556626 CCDC34Q96HJ3 373 aa13.61□□□□□ -0.23
SPTB-208ENST00000556626 TNIKQ9UKE5 1360 aa13.61□□□□□ -0.23
SPTB-208ENST00000556626 U2SURPO15042 1029 aaKnown RBP13.61□□□□□ -0.23
SPTB-208ENST00000556626 RWDD1Q9H446 243 aaPredicted RBP13.6□□□□□ -0.23
SPTB-208ENST00000556626 TMF1P82094 1093 aa13.6□□□□□ -0.23
SPTB-208ENST00000556626 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
SPTB-208ENST00000556626 GSE1Q14687 1217 aa13.59□□□□□ -0.23
SPTB-208ENST00000556626 TIMELESSQ9UNS1 1208 aa13.59□□□□□ -0.23
SPTB-208ENST00000556626 PMFBP1Q8TBY8 1022 aa13.58□□□□□ -0.23
SPTB-208ENST00000556626 KAT6BQ8WYB5 2073 aa13.58□□□□□ -0.24
SPTB-208ENST00000556626 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
SPTB-208ENST00000556626 CALRP27797 417 aaKnown RBP13.56□□□□□ -0.24
SPTB-208ENST00000556626 ZNF771Q7L3S4 317 aaPredicted RBP13.56□□□□□ -0.24
SPTB-208ENST00000556626 NPHP1O15259 732 aa13.56□□□□□ -0.24
SPTB-208ENST00000556626 SENP3Q9H4L4 574 aaPredicted RBP13.56□□□□□ -0.24
SPTB-208ENST00000556626 SIN3AQ96ST3 1273 aa13.56□□□□□ -0.24
SPTB-208ENST00000556626 GPS2Q13227 327 aa13.55□□□□□ -0.24
SPTB-208ENST00000556626 KIF27Q86VH2 1401 aa13.55□□□□□ -0.24
SPTB-208ENST00000556626 ARHGAP35Q9NRY4 1499 aa13.55□□□□□ -0.24
SPTB-208ENST00000556626 ITPRIPQ8IWB1 547 aa13.54□□□□□ -0.24
SPTB-208ENST00000556626 CFDP1Q9UEE9 299 aaPredicted RBP13.54□□□□□ -0.24
SPTB-208ENST00000556626 ST18O60284 1047 aa13.54□□□□□ -0.24
SPTB-208ENST00000556626 MFAP1P55081 439 aaKnown RBP13.54□□□□□ -0.24
SPTB-208ENST00000556626 SKOR2Q2VWA4 1001 aaPredicted RBP13.54□□□□□ -0.24
SPTB-208ENST00000556626 GPATCH3Q96I76 525 aa13.54□□□□□ -0.24
SPTB-208ENST00000556626 SETD5Q9C0A6 1442 aa13.53□□□□□ -0.24
SPTB-208ENST00000556626 POGKQ9P215 609 aa13.53□□□□□ -0.24
SPTB-208ENST00000556626 TEX35Q5T0J7 233 aa13.52□□□□□ -0.24
SPTB-208ENST00000556626 TPM3P06753 285 aa13.52□□□□□ -0.25
SPTB-208ENST00000556626 RALBP1Q15311 655 aa13.52□□□□□ -0.25
SPTB-208ENST00000556626 KIF16BQ96L93 1317 aa13.51□□□□□ -0.25
SPTB-208ENST00000556626 CHMP7Q8WUX9 453 aaPredicted RBP13.51□□□□□ -0.25
SPTB-208ENST00000556626 WRNQ14191 1432 aaPredicted RBP eCLIP13.51□□□□□ -0.25
SPTB-208ENST00000556626 PLEKHD1A6NEE1 506 aa13.51□□□□□ -0.25
SPTB-208ENST00000556626 PHLDB1Q86UU1 1377 aa13.5□□□□□ -0.25
SPTB-208ENST00000556626 NCBP3Q53F19 620 aaKnown RBP13.49□□□□□ -0.25
SPTB-208ENST00000556626 HSP90B1P14625 803 aaKnown RBP13.49□□□□□ -0.25
SPTB-208ENST00000556626 CCDC70Q6NSX1 233 aa13.49□□□□□ -0.25
SPTB-208ENST00000556626 APBB1O00213 710 aa13.48□□□□□ -0.25
SPTB-208ENST00000556626 DCAF11Q8TEB1 546 aa13.48□□□□□ -0.25
SPTB-208ENST00000556626 MORC1Q86VD1 984 aa13.48□□□□□ -0.25
SPTB-208ENST00000556626 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.48□□□□□ -0.25
SPTB-208ENST00000556626 NOM1Q5C9Z4 860 aaKnown RBP13.48□□□□□ -0.25
SPTB-208ENST00000556626 FANCIQ9NVI1 1328 aa13.47□□□□□ -0.25
SPTB-208ENST00000556626 RTF1Q92541 710 aaKnown RBP13.47□□□□□ -0.25
SPTB-208ENST00000556626 GOLGA6L19H0YKK7 550 aa13.47□□□□□ -0.25
SPTB-208ENST00000556626 ATP6V1DQ9Y5K8 247 aa13.47□□□□□ -0.25
SPTB-208ENST00000556626 ROCK2O75116 1388 aaKnown RBP13.47□□□□□ -0.25
SPTB-208ENST00000556626 KANK1Q14678 1352 aa13.47□□□□□ -0.25
SPTB-208ENST00000556626 TRIM6-TRIM34B2RNG4 842 aa13.47□□□□□ -0.25
SPTB-208ENST00000556626 KIF3AQ9Y496 699 aa13.46□□□□□ -0.25
SPTB-208ENST00000556626 MTERF4Q7Z6M4 381 aaKnown RBP13.46□□□□□ -0.26
SPTB-208ENST00000556626 EIF3AQ14152 1382 aaKnown RBP13.45□□□□□ -0.26
SPTB-208ENST00000556626 TSR1Q2NL82 804 aaKnown RBP13.45□□□□□ -0.26
SPTB-208ENST00000556626 FAM13BQ9NYF5 915 aa13.44□□□□□ -0.26
SPTB-208ENST00000556626 HMMRO75330 724 aa13.44□□□□□ -0.26
SPTB-208ENST00000556626 FAM161AQ3B820 660 aa13.43□□□□□ -0.26
SPTB-208ENST00000556626 DDX49Q9Y6V7 483 aaKnown RBP13.43□□□□□ -0.26
SPTB-208ENST00000556626 CENPQQ7L2Z9 268 aaPredicted RBP13.43□□□□□ -0.26
SPTB-208ENST00000556626 UBE2Q2Q8WVN8 375 aa13.43□□□□□ -0.26
SPTB-208ENST00000556626 CCAR2Q8N163 923 aaKnown RBP13.43□□□□□ -0.26
SPTB-208ENST00000556626 HSPA5P11021 654 aaKnown RBP13.42□□□□□ -0.26
SPTB-208ENST00000556626 ANO8Q9HCE9 1232 aaPredicted RBP13.42□□□□□ -0.26
SPTB-208ENST00000556626 ISY1Q9ULR0 285 aaKnown RBP13.42□□□□□ -0.26
SPTB-208ENST00000556626 BAZ1BQ9UIG0 1483 aaKnown RBP13.42□□□□□ -0.26
SPTB-208ENST00000556626 KCNH8Q96L42 1107 aa13.42□□□□□ -0.26
SPTB-208ENST00000556626 TPM1P09493 284 aa13.41□□□□□ -0.26
SPTB-208ENST00000556626 CREBRFQ8IUR6 639 aa13.41□□□□□ -0.26
SPTB-208ENST00000556626 SMC4Q9NTJ3 1288 aa13.41□□□□□ -0.26
SPTB-208ENST00000556626 CEP89Q96ST8 783 aa13.41□□□□□ -0.26
SPTB-208ENST00000556626 EIF4G1Q04637 1599 aaKnown RBP13.41□□□□□ -0.26
SPTB-208ENST00000556626 PDE3BQ13370 1112 aa13.41□□□□□ -0.26
SPTB-208ENST00000556626 FAM43AQ8N2R8 423 aa13.4□□□□□ -0.26
SPTB-208ENST00000556626 RASSF8Q8NHQ8 419 aa13.4□□□□□ -0.26
SPTB-208ENST00000556626 FOXD4L1Q9NU39 408 aa13.4□□□□□ -0.26
SPTB-208ENST00000556626 SRPK2P78362 688 aaKnown RBP13.4□□□□□ -0.26
SPTB-208ENST00000556626 MAP7D2Q96T17 732 aa13.4□□□□□ -0.26
SPTB-208ENST00000556626 CHMP4AQ9BY43 222 aa13.4□□□□□ -0.26
SPTB-208ENST00000556626 VPS8Q8N3P4 1428 aa13.4□□□□□ -0.27
SPTB-208ENST00000556626 CENPJQ9HC77 1338 aaPredicted RBP13.39□□□□□ -0.27
SPTB-208ENST00000556626 SPAG9O60271 1321 aaKnown RBP13.39□□□□□ -0.27
SPTB-208ENST00000556626 BECN2A8MW95 431 aa13.38□□□□□ -0.27
SPTB-208ENST00000556626 ZNF592Q92610 1267 aa13.38□□□□□ -0.27
SPTB-208ENST00000556626 H3BQV1 296 aa13.38□□□□□ -0.27
SPTB-208ENST00000556626 IFFO2Q5TF58 517 aa13.38□□□□□ -0.27
SPTB-208ENST00000556626 HDAC5Q9UQL6 1122 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms