RNA–Protein interactions for RNA: ENST00000556454.1

CLMN-207, Transcript of calmin, humanhuman

TSL 2

Gene CLMN, Length 3,023 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-207ENST00000556454 DHX29Q7Z478 1369 aaKnown RBP13.69□□□□□ -0.22
CLMN-207ENST00000556454 EXOC6Q8TAG9 804 aa13.69□□□□□ -0.22
CLMN-207ENST00000556454 KIF7Q2M1P5 1343 aa13.68□□□□□ -0.22
CLMN-207ENST00000556454 HMGXB3Q12766 1538 aa13.68□□□□□ -0.22
CLMN-207ENST00000556454 VSIG10Q8N0Z9 540 aa13.67□□□□□ -0.22
CLMN-207ENST00000556454 GCC2Q8IWJ2 1684 aa13.66□□□□□ -0.22
CLMN-207ENST00000556454 CC2D2AQ9P2K1 1620 aa13.66□□□□□ -0.22
CLMN-207ENST00000556454 RRAGDQ9NQL2 400 aaPredicted RBP13.66□□□□□ -0.22
CLMN-207ENST00000556454 CASKIN1Q8WXD9 1431 aa13.63□□□□□ -0.23
CLMN-207ENST00000556454 RRP9O43818 475 aaKnown RBP13.63□□□□□ -0.23
CLMN-207ENST00000556454 FRAT2O75474 233 aaPredicted RBP13.63□□□□□ -0.23
CLMN-207ENST00000556454 LRPPRCP42704 1394 aaKnown RBP13.62□□□□□ -0.23
CLMN-207ENST00000556454 PNISRQ8TF01 805 aaKnown RBP13.62□□□□□ -0.23
CLMN-207ENST00000556454 SLC4A3P48751 1232 aa13.6□□□□□ -0.23
CLMN-207ENST00000556454 IGF1RP08069 1367 aa13.6□□□□□ -0.23
CLMN-207ENST00000556454 FGD5Q6ZNL6 1462 aa13.6□□□□□ -0.23
CLMN-207ENST00000556454 TEX14Q8IWB6 1497 aa13.59□□□□□ -0.23
CLMN-207ENST00000556454 RCAN3Q9UKA8 241 aa13.59□□□□□ -0.23
CLMN-207ENST00000556454 L3MBTL2Q969R5 705 aa13.59□□□□□ -0.23
CLMN-207ENST00000556454 DAXXQ9UER7 740 aaPredicted RBP13.59□□□□□ -0.23
CLMN-207ENST00000556454 MIA2Q96PC5 1412 aa13.59□□□□□ -0.23
CLMN-207ENST00000556454 EFCAB5A4FU69 1503 aa13.58□□□□□ -0.24
CLMN-207ENST00000556454 HSP90AA2PQ14568 343 aaPredicted RBP13.58□□□□□ -0.24
CLMN-207ENST00000556454 PODXL2Q9NZ53 605 aa13.57□□□□□ -0.24
CLMN-207ENST00000556454 BCORL1Q5H9F3 1711 aa13.57□□□□□ -0.24
CLMN-207ENST00000556454 NBPF8Q3BBV2 869 aa13.56□□□□□ -0.24
CLMN-207ENST00000556454 L1TD1Q5T7N2 865 aaKnown RBP13.55□□□□□ -0.24
CLMN-207ENST00000556454 MYOM3Q5VTT5 1437 aa13.55□□□□□ -0.24
CLMN-207ENST00000556454 RPRD2Q5VT52 1461 aaKnown RBP13.55□□□□□ -0.24
CLMN-207ENST00000556454 KDM6BO15054 1643 aa13.54□□□□□ -0.24
CLMN-207ENST00000556454 CARMIL1Q5VZK9 1371 aa13.54□□□□□ -0.24
CLMN-207ENST00000556454 FHOD3Q2V2M9 1422 aa13.54□□□□□ -0.24
CLMN-207ENST00000556454 HSP90AA1P07900 732 aaKnown RBP13.54□□□□□ -0.24
CLMN-207ENST00000556454 VIRMAQ69YN4 1812 aaKnown RBP13.54□□□□□ -0.24
CLMN-207ENST00000556454 CLCN1P35523 988 aa13.53□□□□□ -0.24
CLMN-207ENST00000556454 KDM2BQ8NHM5 1336 aa13.52□□□□□ -0.24
CLMN-207ENST00000556454 PDE3BQ13370 1112 aa13.52□□□□□ -0.24
CLMN-207ENST00000556454 C8orf34Q49A92 452 aa13.52□□□□□ -0.24
CLMN-207ENST00000556454 LRRIQ1Q96JM4 1722 aa13.52□□□□□ -0.25
CLMN-207ENST00000556454 SKAP1Q86WV1 359 aa13.52□□□□□ -0.25
CLMN-207ENST00000556454 SNAPC4Q5SXM2 1469 aa13.52□□□□□ -0.25
CLMN-207ENST00000556454 BRD4O60885 1362 aaPredicted RBP13.52□□□□□ -0.25
CLMN-207ENST00000556454 SUPT6HQ7KZ85 1726 aaKnown RBP13.51□□□□□ -0.25
CLMN-207ENST00000556454 FAM161AQ3B820 660 aa13.51□□□□□ -0.25
CLMN-207ENST00000556454 NAP1L5Q96NT1 182 aaPredicted RBP13.51□□□□□ -0.25
CLMN-207ENST00000556454 POGKQ9P215 609 aa13.51□□□□□ -0.25
CLMN-207ENST00000556454 ARID4BQ4LE39 1312 aaPredicted RBP13.51□□□□□ -0.25
CLMN-207ENST00000556454 KTN1Q86UP2 1357 aaKnown RBP13.51□□□□□ -0.25
CLMN-207ENST00000556454 PLEKHG5O94827 1062 aa13.5□□□□□ -0.25
CLMN-207ENST00000556454 TMC1Q8TDI8 760 aa13.5□□□□□ -0.25
CLMN-207ENST00000556454 PNNQ9H307 717 aaKnown RBP13.5□□□□□ -0.25
CLMN-207ENST00000556454 TCOF1Q13428 1488 aaKnown RBP13.49□□□□□ -0.25
CLMN-207ENST00000556454 SENP3-EIF4A1A0A087X0R7 540 aa13.49□□□□□ -0.25
CLMN-207ENST00000556454 ANKRD30BQ9BXX2 1392 aa13.48□□□□□ -0.25
CLMN-207ENST00000556454 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
CLMN-207ENST00000556454 MPHOSPH9Q99550 1183 aa13.48□□□□□ -0.25
CLMN-207ENST00000556454 KDM5CP41229 1560 aa13.48□□□□□ -0.25
CLMN-207ENST00000556454 MTUS2Q5JR59 1369 aa13.48□□□□□ -0.25
CLMN-207ENST00000556454 ATP1B4Q9UN42 357 aaPredicted RBP13.48□□□□□ -0.25
CLMN-207ENST00000556454 ROCK2O75116 1388 aaKnown RBP13.47□□□□□ -0.25
CLMN-207ENST00000556454 CRBNQ96SW2 442 aa13.47□□□□□ -0.25
CLMN-207ENST00000556454 MBD5Q9P267 1494 aa13.47□□□□□ -0.25
CLMN-207ENST00000556454 UGGT2Q9NYU1 1516 aa13.46□□□□□ -0.25
CLMN-207ENST00000556454 E9PCH4 1651 aa13.46□□□□□ -0.25
CLMN-207ENST00000556454 EHBP1L1Q8N3D4 1523 aa13.46□□□□□ -0.25
CLMN-207ENST00000556454 PRDM2Q13029 1718 aa13.46□□□□□ -0.25
CLMN-207ENST00000556454 KIF15Q9NS87 1388 aa13.46□□□□□ -0.26
CLMN-207ENST00000556454 CENPQQ7L2Z9 268 aaPredicted RBP13.45□□□□□ -0.26
CLMN-207ENST00000556454 P3H3Q8IVL6 736 aa13.45□□□□□ -0.26
CLMN-207ENST00000556454 THOC2Q8NI27 1593 aaKnown RBP13.45□□□□□ -0.26
CLMN-207ENST00000556454 CENPJQ9HC77 1338 aaPredicted RBP13.45□□□□□ -0.26
CLMN-207ENST00000556454 KIF14Q15058 1648 aa13.45□□□□□ -0.26
CLMN-207ENST00000556454 CTTNBP2Q8WZ74 1663 aa13.45□□□□□ -0.26
CLMN-207ENST00000556454 MYBBP1AQ9BQG0 1328 aaKnown RBP13.45□□□□□ -0.26
CLMN-207ENST00000556454 FSD2A1L4K1 749 aa13.44□□□□□ -0.26
CLMN-207ENST00000556454 ZMYM4Q5VZL5 1548 aa13.43□□□□□ -0.26
CLMN-207ENST00000556454 USP47Q96K76 1375 aa13.43□□□□□ -0.26
CLMN-207ENST00000556454 RRP7BPQ9NSQ0 103 aa13.43□□□□□ -0.26
CLMN-207ENST00000556454 XRCC6P12956 609 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLMN-207ENST00000556454 CFTRP13569 1480 aa13.42□□□□□ -0.26
CLMN-207ENST00000556454 PLIN1O60240 522 aa13.42□□□□□ -0.26
CLMN-207ENST00000556454 INSRP06213 1382 aa13.42□□□□□ -0.26
CLMN-207ENST00000556454 RALBP1Q15311 655 aa13.41□□□□□ -0.26
CLMN-207ENST00000556454 CNGB1Q14028 1251 aaPredicted RBP13.4□□□□□ -0.26
CLMN-207ENST00000556454 GRIN2BQ13224 1484 aa13.39□□□□□ -0.27
CLMN-207ENST00000556454 USP19O94966 1318 aa13.39□□□□□ -0.27
CLMN-207ENST00000556454 FOXD1Q16676 465 aa13.39□□□□□ -0.27
CLMN-207ENST00000556454 CDCA7LQ96GN5 454 aa13.39□□□□□ -0.27
CLMN-207ENST00000556454 BLMP54132 1417 aaPredicted RBP13.38□□□□□ -0.27
CLMN-207ENST00000556454 GOLGA6L3A6NEY3 463 aa13.38□□□□□ -0.27
CLMN-207ENST00000556454 PLEKHH2Q8IVE3 1493 aa13.38□□□□□ -0.27
CLMN-207ENST00000556454 CALD1Q05682 793 aaKnown RBP13.38□□□□□ -0.27
CLMN-207ENST00000556454 PDCL3Q9H2J4 239 aa13.37□□□□□ -0.27
CLMN-207ENST00000556454 ANTXR1Q9H6X2 564 aa13.37□□□□□ -0.27
CLMN-207ENST00000556454 TPM2P07951 284 aa13.37□□□□□ -0.27
CLMN-207ENST00000556454 SAMD9Q5K651 1589 aa13.37□□□□□ -0.27
CLMN-207ENST00000556454 C20orf194Q5TEA3 1177 aa13.36□□□□□ -0.27
CLMN-207ENST00000556454 NLRP1Q9C000 1473 aa13.35□□□□□ -0.27
CLMN-207ENST00000556454 PANK2Q9BZ23 570 aa13.35□□□□□ -0.27
CLMN-207ENST00000556454 PRDM4Q9UKN5 801 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms