RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 WDR97A6NE52 1622 aa19.48■□□□□ 0.71
ARHGEF40-207ENST00000556399 TOP2BQ02880 1626 aa19.48■□□□□ 0.71
ARHGEF40-207ENST00000556399 CCDC7Q96M83 1385 aa19.47■□□□□ 0.71
ARHGEF40-207ENST00000556399 CNTLNQ9NXG0 1405 aa19.46■□□□□ 0.71
ARHGEF40-207ENST00000556399 NLRP13Q86W25 1043 aa19.46■□□□□ 0.71
ARHGEF40-207ENST00000556399 ANKRD30AQ9BXX3 1397 aa19.46■□□□□ 0.71
ARHGEF40-207ENST00000556399 CFAP53Q96M91 514 aa19.45■□□□□ 0.7
ARHGEF40-207ENST00000556399 PDE3BQ13370 1112 aa19.44■□□□□ 0.7
ARHGEF40-207ENST00000556399 KIF15Q9NS87 1388 aa19.44■□□□□ 0.7
ARHGEF40-207ENST00000556399 FTSJ3Q8IY81 847 aaKnown RBP19.44■□□□□ 0.7
ARHGEF40-207ENST00000556399 MYOM3Q5VTT5 1437 aa19.43■□□□□ 0.7
ARHGEF40-207ENST00000556399 MYBBP1AQ9BQG0 1328 aaKnown RBP19.43■□□□□ 0.7
ARHGEF40-207ENST00000556399 TRIM44Q96DX7 344 aaPredicted RBP19.42■□□□□ 0.7
ARHGEF40-207ENST00000556399 EXOC6Q8TAG9 804 aa19.42■□□□□ 0.7
ARHGEF40-207ENST00000556399 KIF7Q2M1P5 1343 aa19.42■□□□□ 0.7
ARHGEF40-207ENST00000556399 USP47Q96K76 1375 aa19.41■□□□□ 0.7
ARHGEF40-207ENST00000556399 PDE4AP27815 886 aa19.41■□□□□ 0.7
ARHGEF40-207ENST00000556399 ST20-MTHFSA0A0A6YYL1 179 aa19.41■□□□□ 0.7
ARHGEF40-207ENST00000556399 RRP1P56182 461 aaKnown RBP19.41■□□□□ 0.7
ARHGEF40-207ENST00000556399 FANCD2Q9BXW9 1451 aa19.4■□□□□ 0.7
ARHGEF40-207ENST00000556399 CASKIN1Q8WXD9 1431 aa19.4■□□□□ 0.7
ARHGEF40-207ENST00000556399 TNNT2P45379 298 aaPredicted RBP19.4■□□□□ 0.7
ARHGEF40-207ENST00000556399 TIAM1Q13009 1591 aa19.39■□□□□ 0.69
ARHGEF40-207ENST00000556399 MYH16Q9H6N6 1097 aa19.39■□□□□ 0.69
ARHGEF40-207ENST00000556399 STAG3Q9UJ98 1225 aa19.39■□□□□ 0.69
ARHGEF40-207ENST00000556399 CUX1P39880 1505 aa19.38■□□□□ 0.69
ARHGEF40-207ENST00000556399 PDS5BQ9NTI5 1447 aa19.37■□□□□ 0.69
ARHGEF40-207ENST00000556399 USP35Q9P2H5 1018 aa19.35■□□□□ 0.69
ARHGEF40-207ENST00000556399 RAD54L2Q9Y4B4 1467 aa19.35■□□□□ 0.69
ARHGEF40-207ENST00000556399 NCOA2Q15596 1464 aa19.34■□□□□ 0.69
ARHGEF40-207ENST00000556399 FYCO1Q9BQS8 1478 aa19.34■□□□□ 0.69
ARHGEF40-207ENST00000556399 GOLGA6L22H0YM25 854 aa19.34■□□□□ 0.69
ARHGEF40-207ENST00000556399 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
ARHGEF40-207ENST00000556399 NCAPD3P42695 1498 aa19.34■□□□□ 0.69
ARHGEF40-207ENST00000556399 PLIN1O60240 522 aa19.34■□□□□ 0.69
ARHGEF40-207ENST00000556399 NAP1L5Q96NT1 182 aaPredicted RBP19.32■□□□□ 0.68
ARHGEF40-207ENST00000556399 GOLGA2Q08379 1002 aa19.31■□□□□ 0.68
ARHGEF40-207ENST00000556399 NPM1P06748 294 aaKnown RBP eCLIP19.3■□□□□ 0.68
ARHGEF40-207ENST00000556399 L1TD1Q5T7N2 865 aaKnown RBP19.3■□□□□ 0.68
ARHGEF40-207ENST00000556399 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.29■□□□□ 0.68
ARHGEF40-207ENST00000556399 SPRYD3Q8NCJ5 442 aa19.29■□□□□ 0.68
ARHGEF40-207ENST00000556399 SLKQ9H2G2 1235 aaPredicted RBP19.28■□□□□ 0.68
ARHGEF40-207ENST00000556399 MAPK8IP3Q9UPT6 1336 aa19.28■□□□□ 0.68
ARHGEF40-207ENST00000556399 CFTRP13569 1480 aa19.28■□□□□ 0.68
ARHGEF40-207ENST00000556399 CCDC184Q52MB2 194 aa19.28■□□□□ 0.68
ARHGEF40-207ENST00000556399 HFM1A2PYH4 1435 aa19.28■□□□□ 0.68
ARHGEF40-207ENST00000556399 HNRNPMP52272 730 aaKnown RBP eCLIP19.28■□□□□ 0.68
ARHGEF40-207ENST00000556399 CARMIL2Q6F5E8 1435 aa19.27■□□□□ 0.68
ARHGEF40-207ENST00000556399 CRBNQ96SW2 442 aa19.27■□□□□ 0.68
ARHGEF40-207ENST00000556399 MS4A1P11836 297 aa19.27■□□□□ 0.68
ARHGEF40-207ENST00000556399 NCLP19338 710 aaKnown RBP19.26■□□□□ 0.67
ARHGEF40-207ENST00000556399 SLC4A3P48751 1232 aa19.26■□□□□ 0.67
ARHGEF40-207ENST00000556399 ESF1Q9H501 851 aaKnown RBP19.26■□□□□ 0.67
ARHGEF40-207ENST00000556399 MSH5O43196 834 aa19.26■□□□□ 0.67
ARHGEF40-207ENST00000556399 MORC1Q86VD1 984 aa19.25■□□□□ 0.67
ARHGEF40-207ENST00000556399 PANK3Q9H999 370 aa19.25■□□□□ 0.67
ARHGEF40-207ENST00000556399 ZNF644Q9H582 1327 aaPredicted RBP19.24■□□□□ 0.67
ARHGEF40-207ENST00000556399 CENPQQ7L2Z9 268 aaPredicted RBP19.24■□□□□ 0.67
ARHGEF40-207ENST00000556399 CCDC146Q8IYE0 955 aa19.24■□□□□ 0.67
ARHGEF40-207ENST00000556399 HSP90AB1P08238 724 aaKnown RBP19.24■□□□□ 0.67
ARHGEF40-207ENST00000556399 HSCBQ8IWL3 235 aa19.24■□□□□ 0.67
ARHGEF40-207ENST00000556399 U2SURPO15042 1029 aaKnown RBP19.23■□□□□ 0.67
ARHGEF40-207ENST00000556399 ARID4BQ4LE39 1312 aaPredicted RBP19.22■□□□□ 0.67
ARHGEF40-207ENST00000556399 PAK3O75914 559 aaPredicted RBP19.21■□□□□ 0.67
ARHGEF40-207ENST00000556399 FAM161AQ3B820 660 aa19.21■□□□□ 0.67
ARHGEF40-207ENST00000556399 AKNAQ7Z591 1439 aa19.21■□□□□ 0.67
ARHGEF40-207ENST00000556399 GSE1Q14687 1217 aa19.21■□□□□ 0.67
ARHGEF40-207ENST00000556399 GAPVD1Q14C86 1478 aa19.21■□□□□ 0.67
ARHGEF40-207ENST00000556399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.21■□□□□ 0.675e-7■□□□□ 10.3
ARHGEF40-207ENST00000556399 NBPF8Q3BBV2 869 aa19.2■□□□□ 0.66
ARHGEF40-207ENST00000556399 EFCAB5A4FU69 1503 aa19.19■□□□□ 0.66
ARHGEF40-207ENST00000556399 ERCC6Q03468 1493 aa19.19■□□□□ 0.66
ARHGEF40-207ENST00000556399 CCDC144AA2RUR9 1427 aa19.18■□□□□ 0.66
ARHGEF40-207ENST00000556399 RWDD1Q9H446 243 aaPredicted RBP19.17■□□□□ 0.66
ARHGEF40-207ENST00000556399 GZF1Q9H116 711 aaPredicted RBP19.17■□□□□ 0.66
ARHGEF40-207ENST00000556399 KANK1Q14678 1352 aa19.16■□□□□ 0.66
ARHGEF40-207ENST00000556399 PMFBP1Q8TBY8 1022 aa19.15■□□□□ 0.66
ARHGEF40-207ENST00000556399 NAIPQ13075 1403 aa19.15■□□□□ 0.66
ARHGEF40-207ENST00000556399 CENPJQ9HC77 1338 aaPredicted RBP19.15■□□□□ 0.66
ARHGEF40-207ENST00000556399 MAP3K1Q13233 1512 aa19.14■□□□□ 0.65
ARHGEF40-207ENST00000556399 BRD4O60885 1362 aaPredicted RBP19.14■□□□□ 0.65
ARHGEF40-207ENST00000556399 SMG6Q86US8 1419 aaKnown RBP19.13■□□□□ 0.65
ARHGEF40-207ENST00000556399 CASC1Q6TDU7 716 aa19.13■□□□□ 0.65
ARHGEF40-207ENST00000556399 MAPKBP1O60336 1514 aa19.13■□□□□ 0.65
ARHGEF40-207ENST00000556399 CHMP4BQ9H444 224 aaKnown RBP19.12■□□□□ 0.65
ARHGEF40-207ENST00000556399 PCF11O94913 1555 aaKnown RBP19.12■□□□□ 0.65
ARHGEF40-207ENST00000556399 RSPH4AQ5TD94 716 aa19.12■□□□□ 0.65
ARHGEF40-207ENST00000556399 EHBP1L1Q8N3D4 1523 aa19.11■□□□□ 0.65
ARHGEF40-207ENST00000556399 CLUAP1Q96AJ1 413 aa19.11■□□□□ 0.65
ARHGEF40-207ENST00000556399 EIF3AQ14152 1382 aaKnown RBP19.1■□□□□ 0.65
ARHGEF40-207ENST00000556399 U2AF1L5P0DN76 240 aaPredicted RBP19.1■□□□□ 0.65
ARHGEF40-207ENST00000556399 U2AF1Q01081 240 aaKnown RBP eCLIP19.1■□□□□ 0.65
ARHGEF40-207ENST00000556399 PNISRQ8TF01 805 aaKnown RBP19.09■□□□□ 0.65
ARHGEF40-207ENST00000556399 PTMAP06454 111 aaKnown RBP19.09■□□□□ 0.65
ARHGEF40-207ENST00000556399 MFAP1P55081 439 aaKnown RBP19.08■□□□□ 0.65
ARHGEF40-207ENST00000556399 CDCA7LQ96GN5 454 aa19.08■□□□□ 0.65
ARHGEF40-207ENST00000556399 GOLGA6L3A6NEY3 463 aa19.08■□□□□ 0.65
ARHGEF40-207ENST00000556399 POGKQ9P215 609 aa19.08■□□□□ 0.65
ARHGEF40-207ENST00000556399 HMGXB3Q12766 1538 aa19.08■□□□□ 0.65
ARHGEF40-207ENST00000556399 JPH4Q96JJ6 628 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms