RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 DISP3Q9P2K9 1392 aa25.6■■□□□ 1.69
SUPT16H-205ENST00000556217 SOCS7O14512 581 aa25.6■■□□□ 1.69
SUPT16H-205ENST00000556217 ATP1B4Q9UN42 357 aaPredicted RBP25.6■■□□□ 1.69
SUPT16H-205ENST00000556217 YEATS2Q9ULM3 1422 aa25.6■■□□□ 1.69
SUPT16H-205ENST00000556217 CDK11AQ9UQ88 783 aaPredicted RBP25.59■■□□□ 1.69
SUPT16H-205ENST00000556217 SCAPERQ9BY12 1400 aa25.59■■□□□ 1.69
SUPT16H-205ENST00000556217 MYO5CQ9NQX4 1742 aa25.59■■□□□ 1.69
SUPT16H-205ENST00000556217 ILDR2Q71H61 639 aa25.57■■□□□ 1.68
SUPT16H-205ENST00000556217 SIGLEC1Q9BZZ2 1709 aa25.56■■□□□ 1.68
SUPT16H-205ENST00000556217 EHMT2Q96KQ7 1210 aa25.55■■□□□ 1.68
SUPT16H-205ENST00000556217 FER1L4A9Z1Z3 1794 aa25.54■■□□□ 1.68
SUPT16H-205ENST00000556217 EFCAB2Q5VUJ9 269 aa25.54■■□□□ 1.68
SUPT16H-205ENST00000556217 ARHGAP35Q9NRY4 1499 aa25.53■■□□□ 1.68
SUPT16H-205ENST00000556217 MLECQ14165 292 aa25.53■■□□□ 1.68
SUPT16H-205ENST00000556217 KIF14Q15058 1648 aa25.52■■□□□ 1.68
SUPT16H-205ENST00000556217 ATP10AO60312 1499 aa25.5■■□□□ 1.67
SUPT16H-205ENST00000556217 DMRT2Q9Y5R5 561 aa25.5■■□□□ 1.67
SUPT16H-205ENST00000556217 CLIP1P30622 1438 aa25.48■■□□□ 1.67
SUPT16H-205ENST00000556217 C9orf84Q5VXU9 1444 aa25.47■■□□□ 1.67
SUPT16H-205ENST00000556217 TROQ12816 1431 aaPredicted RBP25.46■■□□□ 1.67
SUPT16H-205ENST00000556217 ZNF518AQ6AHZ1 1483 aa25.46■■□□□ 1.67
SUPT16H-205ENST00000556217 ARHGAP5Q13017 1502 aa25.45■■□□□ 1.66
SUPT16H-205ENST00000556217 ARHGEF12Q9NZN5 1544 aa25.44■■□□□ 1.66
SUPT16H-205ENST00000556217 LRRIQ1Q96JM4 1722 aa25.41■■□□□ 1.66
SUPT16H-205ENST00000556217 PREX1Q8TCU6 1659 aa25.41■■□□□ 1.66
SUPT16H-205ENST00000556217 CHIC1Q5VXU3 224 aa25.4■■□□□ 1.66
SUPT16H-205ENST00000556217 KDM5CP41229 1560 aa25.39■■□□□ 1.66
SUPT16H-205ENST00000556217 MYT1LQ9UL68 1186 aa25.37■■□□□ 1.65
SUPT16H-205ENST00000556217 CEBPAP49715 358 aaPredicted RBP25.36■■□□□ 1.65
SUPT16H-205ENST00000556217 CDC42BPBQ9Y5S2 1711 aa25.36■■□□□ 1.65
SUPT16H-205ENST00000556217 AFAP1Q8N556 730 aa25.35■■□□□ 1.65
SUPT16H-205ENST00000556217 SETD1BQ9UPS6 1966 aaKnown RBP25.35■■□□□ 1.65
SUPT16H-205ENST00000556217 CCDC18Q5T9S5 1454 aa25.34■■□□□ 1.65
SUPT16H-205ENST00000556217 STRCQ7RTU9 1775 aa25.33■■□□□ 1.65
SUPT16H-205ENST00000556217 PREX2Q70Z35 1606 aa25.32■■□□□ 1.64
SUPT16H-205ENST00000556217 SPATA31D1Q6ZQQ2 1576 aa25.31■■□□□ 1.64
SUPT16H-205ENST00000556217 REREQ9P2R6 1566 aa25.31■■□□□ 1.64
SUPT16H-205ENST00000556217 DIP2CQ9Y2E4 1556 aa25.31■■□□□ 1.64
SUPT16H-205ENST00000556217 UHRF1BP1Q6BDS2 1440 aa25.31■■□□□ 1.64
SUPT16H-205ENST00000556217 CASKIN1Q8WXD9 1431 aa25.31■■□□□ 1.64
SUPT16H-205ENST00000556217 MLH3Q9UHC1 1453 aa25.29■■□□□ 1.64
SUPT16H-205ENST00000556217 ABCA6Q8N139 1617 aa25.27■■□□□ 1.64
SUPT16H-205ENST00000556217 PTPRTO14522 1441 aa25.27■■□□□ 1.64
SUPT16H-205ENST00000556217 ABCC1P33527 1531 aa25.27■■□□□ 1.64
SUPT16H-205ENST00000556217 ITSN2Q9NZM3 1697 aa25.26■■□□□ 1.63
SUPT16H-205ENST00000556217 ESF1Q9H501 851 aaKnown RBP25.23■■□□□ 1.63
SUPT16H-205ENST00000556217 CDC42BPAQ5VT25 1732 aa25.23■■□□□ 1.63
SUPT16H-205ENST00000556217 AGLP35573 1532 aa25.22■■□□□ 1.63
SUPT16H-205ENST00000556217 TRAPPC8Q9Y2L5 1435 aa25.22■■□□□ 1.63
SUPT16H-205ENST00000556217 FYCO1Q9BQS8 1478 aa25.21■■□□□ 1.63
SUPT16H-205ENST00000556217 C3P01024 1663 aa25.2■■□□□ 1.62
SUPT16H-205ENST00000556217 KIDINS220Q9ULH0 1771 aa25.18■■□□□ 1.62
SUPT16H-205ENST00000556217 IQSEC2Q5JU85 1478 aa25.17■■□□□ 1.62
SUPT16H-205ENST00000556217 LTBP4Q8N2S1 1624 aa25.14■■□□□ 1.61
SUPT16H-205ENST00000556217 CNTLNQ9NXG0 1405 aa25.13■■□□□ 1.61
SUPT16H-205ENST00000556217 SAMD9LQ8IVG5 1584 aa25.11■■□□□ 1.61
SUPT16H-205ENST00000556217 ZNF777Q9ULD5 760 aaPredicted RBP25.11■■□□□ 1.61
SUPT16H-205ENST00000556217 SYCP2Q9BX26 1530 aa25.08■■□□□ 1.61
SUPT16H-205ENST00000556217 GPATCH8Q9UKJ3 1502 aaKnown RBP25.07■■□□□ 1.6
SUPT16H-205ENST00000556217 NCOA1Q15788 1441 aa25.07■■□□□ 1.6
SUPT16H-205ENST00000556217 SPAG9O60271 1321 aaKnown RBP25.07■■□□□ 1.6
SUPT16H-205ENST00000556217 MROH2AA6NES4 1674 aa25.06■■□□□ 1.6
SUPT16H-205ENST00000556217 PLEKHH2Q8IVE3 1493 aa25.05■■□□□ 1.6
SUPT16H-205ENST00000556217 SUPT6HQ7KZ85 1726 aaKnown RBP25.03■■□□□ 1.6
SUPT16H-205ENST00000556217 KIAA1107Q9UPP5 1409 aa25.03■■□□□ 1.6
SUPT16H-205ENST00000556217 HNRNPMP52272 730 aaKnown RBP eCLIP25.02■■□□□ 1.6
SUPT16H-205ENST00000556217 CFDP1Q9UEE9 299 aaPredicted RBP25.02■■□□□ 1.6
SUPT16H-205ENST00000556217 NPATQ14207 1427 aa25.02■■□□□ 1.6
SUPT16H-205ENST00000556217 ATP7AQ04656 1500 aa25.02■■□□□ 1.6
SUPT16H-205ENST00000556217 UBAP1LF5GYI3 381 aa25.01■■□□□ 1.59
SUPT16H-205ENST00000556217 CCNB3Q8WWL7 1395 aa25.01■■□□□ 1.59
SUPT16H-205ENST00000556217 INO80Q9ULG1 1556 aaPredicted RBP24.99■■□□□ 1.59
SUPT16H-205ENST00000556217 ZMYM3Q14202 1370 aa24.97■■□□□ 1.59
SUPT16H-205ENST00000556217 MTUS2Q5JR59 1369 aa24.97■■□□□ 1.59
SUPT16H-205ENST00000556217 PLXNC1O60486 1568 aa24.96■■□□□ 1.59
SUPT16H-205ENST00000556217 A2MP01023 1474 aa24.96■■□□□ 1.59
SUPT16H-205ENST00000556217 CLTCQ00610 1675 aaKnown RBP24.95■■□□□ 1.58
SUPT16H-205ENST00000556217 CAMSAP1Q5T5Y3 1602 aa24.95■■□□□ 1.58
SUPT16H-205ENST00000556217 ZNF335Q9H4Z2 1342 aaPredicted RBP24.92■■□□□ 1.58
SUPT16H-205ENST00000556217 NCKAP5LQ9HCH0 1330 aa24.92■■□□□ 1.58
SUPT16H-205ENST00000556217 ADGBQ8N7X0 1667 aa24.92■■□□□ 1.58
SUPT16H-205ENST00000556217 PKD2Q13563 968 aa24.89■■□□□ 1.58
SUPT16H-205ENST00000556217 ZNF142P52746 1687 aaPredicted RBP24.88■■□□□ 1.57
SUPT16H-205ENST00000556217 EHBP1L1Q8N3D4 1523 aa24.88■■□□□ 1.57
SUPT16H-205ENST00000556217 TIAM1Q13009 1591 aa24.88■■□□□ 1.57
SUPT16H-205ENST00000556217 MYO3AQ8NEV4 1616 aa24.87■■□□□ 1.57
SUPT16H-205ENST00000556217 GGT6Q6P531 493 aa24.87■■□□□ 1.57
SUPT16H-205ENST00000556217 PPP6R1Q9UPN7 881 aa24.87■■□□□ 1.57
SUPT16H-205ENST00000556217 PTPRKQ15262 1439 aa24.85■■□□□ 1.57
SUPT16H-205ENST00000556217 CEP170BQ9Y4F5 1589 aaPredicted RBP24.84■■□□□ 1.57
SUPT16H-205ENST00000556217 PLA2R1Q13018 1463 aa24.83■■□□□ 1.56
SUPT16H-205ENST00000556217 ZNF644Q9H582 1327 aaPredicted RBP24.82■■□□□ 1.56
SUPT16H-205ENST00000556217 RTEL1-TNFRSF6BF6WH68 1400 aa24.81■■□□□ 1.56
SUPT16H-205ENST00000556217 CEP162Q5TB80 1403 aa24.81■■□□□ 1.56
SUPT16H-205ENST00000556217 MBD5Q9P267 1494 aa24.81■■□□□ 1.56
SUPT16H-205ENST00000556217 TCOF1Q13428 1488 aaKnown RBP24.77■■□□□ 1.56
SUPT16H-205ENST00000556217 DHX29Q7Z478 1369 aaKnown RBP24.76■■□□□ 1.55
SUPT16H-205ENST00000556217 HSPA1LP34931 641 aa24.75■■□□□ 1.55
SUPT16H-205ENST00000556217 SCAF1Q9H7N4 1312 aaKnown RBP24.75■■□□□ 1.55
SUPT16H-205ENST00000556217 A2ML1A8K2U0 1454 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms