RNA–Protein interactions for RNA: ENST00000556113.1

CNIH1-205, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CNIH1, Length 523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-205ENST00000556113 NLRP6P59044 892 aa12.39□□□□□ -0.43
CNIH1-205ENST00000556113 POTEJP0CG39 1038 aa12.37□□□□□ -0.43
CNIH1-205ENST00000556113 LAMC3Q9Y6N6 1575 aa12.37□□□□□ -0.43
CNIH1-205ENST00000556113 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
CNIH1-205ENST00000556113 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
CNIH1-205ENST00000556113 C3orf67Q6ZVT6 689 aa12.34□□□□□ -0.43
CNIH1-205ENST00000556113 RYDENQ9NUL5 291 aaKnown RBP12.34□□□□□ -0.43
CNIH1-205ENST00000556113 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.33□□□□□ -0.44
CNIH1-205ENST00000556113 CHGAP10645 457 aaKnown RBP12.32□□□□□ -0.44
CNIH1-205ENST00000556113 BOLA1Q9Y3E2 137 aa12.31□□□□□ -0.44
CNIH1-205ENST00000556113 PHF8Q9UPP1 1060 aa12.29□□□□□ -0.44
CNIH1-205ENST00000556113 FBXO22Q8NEZ5 403 aa12.27□□□□□ -0.45
CNIH1-205ENST00000556113 MFRPQ9BY79 579 aa12.27□□□□□ -0.45
CNIH1-205ENST00000556113 TMEM121BQ9BXQ6 578 aaPredicted RBP12.26□□□□□ -0.45
CNIH1-205ENST00000556113 CCDC88BA6NC98 1476 aa12.26□□□□□ -0.45
CNIH1-205ENST00000556113 CADPSQ9ULU8 1353 aa12.25□□□□□ -0.45
CNIH1-205ENST00000556113 CFTRP13569 1480 aa12.25□□□□□ -0.45
CNIH1-205ENST00000556113 NESP48681 1621 aa12.24□□□□□ -0.45
CNIH1-205ENST00000556113 DPY19L2Q6NUT2 758 aa12.24□□□□□ -0.45
CNIH1-205ENST00000556113 SLAIN1Q8ND83 568 aa12.24□□□□□ -0.45
CNIH1-205ENST00000556113 MS4A4AQ96JQ5 239 aa12.24□□□□□ -0.45
CNIH1-205ENST00000556113 RTN4Q9NQC3 1192 aaKnown RBP12.24□□□□□ -0.45
CNIH1-205ENST00000556113 KIF21AQ7Z4S6 1674 aa12.22□□□□□ -0.45
CNIH1-205ENST00000556113 SNPHO15079 494 aa12.21□□□□□ -0.45
CNIH1-205ENST00000556113 MICALL2Q8IY33 904 aa12.2□□□□□ -0.46
CNIH1-205ENST00000556113 PDS5BQ9NTI5 1447 aa12.19□□□□□ -0.46
CNIH1-205ENST00000556113 THOC2Q8NI27 1593 aaKnown RBP12.18□□□□□ -0.46
CNIH1-205ENST00000556113 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
CNIH1-205ENST00000556113 SUPT5HO00267 1087 aaKnown RBP12.12□□□□□ -0.47
CNIH1-205ENST00000556113 FANCD2Q9BXW9 1451 aa12.12□□□□□ -0.47
CNIH1-205ENST00000556113 CEP164Q9UPV0 1460 aa12.11□□□□□ -0.47
CNIH1-205ENST00000556113 CUX2O14529 1486 aa12.1□□□□□ -0.47
CNIH1-205ENST00000556113 NKX1-1Q15270 411 aaPredicted RBP12.09□□□□□ -0.47
CNIH1-205ENST00000556113 WDR62O43379 1518 aa12.09□□□□□ -0.47
CNIH1-205ENST00000556113 BBXQ8WY36 941 aaPredicted RBP12.08□□□□□ -0.48
CNIH1-205ENST00000556113 MRC2Q9UBG0 1479 aa12.08□□□□□ -0.48
CNIH1-205ENST00000556113 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.03□□□□□ -0.48
CNIH1-205ENST00000556113 DOK7Q18PE1 504 aa12.02□□□□□ -0.49
CNIH1-205ENST00000556113 ABCC8Q09428 1581 aa12.01□□□□□ -0.49
CNIH1-205ENST00000556113 RIMBP2O15034 1052 aa12.01□□□□□ -0.49
CNIH1-205ENST00000556113 GTPBP6O43824 516 aaPredicted RBP12.01□□□□□ -0.49
CNIH1-205ENST00000556113 TMC2Q8TDI7 906 aa12.01□□□□□ -0.49
CNIH1-205ENST00000556113 FAM163AQ96GL9 167 aaPredicted RBP12□□□□□ -0.49
CNIH1-205ENST00000556113 URB2Q14146 1524 aaKnown RBP12□□□□□ -0.49
CNIH1-205ENST00000556113 PPP1R37O75864 691 aa11.99□□□□□ -0.49
CNIH1-205ENST00000556113 DNMBPQ6XZF7 1577 aa11.99□□□□□ -0.49
CNIH1-205ENST00000556113 ZSWIM6Q9HCJ5 1215 aa11.97□□□□□ -0.49
CNIH1-205ENST00000556113 KIF3CO14782 793 aa11.96□□□□□ -0.49
CNIH1-205ENST00000556113 TMEM92Q6UXU6 159 aa11.96□□□□□ -0.49
CNIH1-205ENST00000556113 TOPBP1Q92547 1522 aa11.96□□□□□ -0.5
CNIH1-205ENST00000556113 ST18O60284 1047 aa11.94□□□□□ -0.5
CNIH1-205ENST00000556113 ZNF710Q8N1W2 664 aa11.94□□□□□ -0.5
CNIH1-205ENST00000556113 C2orf72A6NCS6 295 aa11.92□□□□□ -0.5
CNIH1-205ENST00000556113 SPRYD3Q8NCJ5 442 aa11.92□□□□□ -0.5
CNIH1-205ENST00000556113 PCDH10Q9P2E7 1040 aa11.92□□□□□ -0.5
CNIH1-205ENST00000556113 BIVM-ERCC5R4GMW8 1640 aa11.92□□□□□ -0.5
CNIH1-205ENST00000556113 GPHNQ9NQX3 736 aaPredicted RBP11.91□□□□□ -0.5
CNIH1-205ENST00000556113 HOXB3P14651 431 aaPredicted RBP11.9□□□□□ -0.5
CNIH1-205ENST00000556113 LCE2DQ5TA82 110 aaPredicted RBP11.9□□□□□ -0.5
CNIH1-205ENST00000556113 CUX1P39880 1505 aa11.9□□□□□ -0.5
CNIH1-205ENST00000556113 POTEMA6NI47 508 aa11.89□□□□□ -0.51
CNIH1-205ENST00000556113 POTEGQ6S5H5 508 aa11.89□□□□□ -0.51
CNIH1-205ENST00000556113 TOP2BQ02880 1626 aa11.89□□□□□ -0.51
CNIH1-205ENST00000556113 SLC34A2O95436 690 aa11.88□□□□□ -0.51
CNIH1-205ENST00000556113 FOXK1P85037 733 aa11.88□□□□□ -0.51
CNIH1-205ENST00000556113 WDR97A6NE52 1622 aa11.88□□□□□ -0.51
CNIH1-205ENST00000556113 TARBP1Q13395 1621 aaKnown RBP11.88□□□□□ -0.51
CNIH1-205ENST00000556113 PDE4AP27815 886 aa11.87□□□□□ -0.51
CNIH1-205ENST00000556113 IFT140Q96RY7 1462 aa11.86□□□□□ -0.51
CNIH1-205ENST00000556113 POLA1P09884 1462 aaPredicted RBP11.85□□□□□ -0.51
CNIH1-205ENST00000556113 HOXB1P14653 301 aaPredicted RBP11.85□□□□□ -0.51
CNIH1-205ENST00000556113 CRISPLD2Q9H0B8 497 aa11.84□□□□□ -0.51
CNIH1-205ENST00000556113 SYNJ1O43426 1573 aa11.84□□□□□ -0.51
CNIH1-205ENST00000556113 WRNQ14191 1432 aaPredicted RBP eCLIP11.83□□□□□ -0.52
CNIH1-205ENST00000556113 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
CNIH1-205ENST00000556113 EMP3P54852 163 aa11.81□□□□□ -0.52
CNIH1-205ENST00000556113 EIF4G3O43432 1585 aaKnown RBP11.79□□□□□ -0.52
CNIH1-205ENST00000556113 PLPP6Q8IY26 295 aa11.78□□□□□ -0.52
CNIH1-205ENST00000556113 GPR153Q6NV75 609 aa11.77□□□□□ -0.53
CNIH1-205ENST00000556113 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.53
CNIH1-205ENST00000556113 ABCA10Q8WWZ4 1543 aa11.76□□□□□ -0.53
CNIH1-205ENST00000556113 ABCA5Q8WWZ7 1642 aa11.76□□□□□ -0.53
CNIH1-205ENST00000556113 TBC1D12O60347 775 aa11.76□□□□□ -0.53
CNIH1-205ENST00000556113 DSG2Q14126 1118 aa11.76□□□□□ -0.53
CNIH1-205ENST00000556113 SOGA1O94964 1423 aa11.76□□□□□ -0.53
CNIH1-205ENST00000556113 MFSD10Q14728 455 aa11.75□□□□□ -0.53
CNIH1-205ENST00000556113 PPP1R15BQ5SWA1 713 aa11.75□□□□□ -0.53
CNIH1-205ENST00000556113 PTCD2Q8WV60 388 aaKnown RBP11.75□□□□□ -0.53
CNIH1-205ENST00000556113 DDX27Q96GQ7 796 aaKnown RBP11.75□□□□□ -0.53
CNIH1-205ENST00000556113 NCKAP5LQ9HCH0 1330 aa11.75□□□□□ -0.53
CNIH1-205ENST00000556113 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
CNIH1-205ENST00000556113 RAD54L2Q9Y4B4 1467 aa11.74□□□□□ -0.53
CNIH1-205ENST00000556113 ZNF608Q9ULD9 1512 aaPredicted RBP11.74□□□□□ -0.53
CNIH1-205ENST00000556113 PBRM1Q86U86 1689 aa11.74□□□□□ -0.53
CNIH1-205ENST00000556113 MARVELD3Q96A59 401 aa11.73□□□□□ -0.53
CNIH1-205ENST00000556113 LARP6Q9BRS8 491 aaKnown RBP11.72□□□□□ -0.53
CNIH1-205ENST00000556113 PCDHGA4Q9Y5G9 962 aa11.71□□□□□ -0.53
CNIH1-205ENST00000556113 ERBB3P21860 1342 aa11.7□□□□□ -0.54
CNIH1-205ENST00000556113 PSDA5PKW4 1024 aaPredicted RBP11.7□□□□□ -0.54
CNIH1-205ENST00000556113 ARSIQ5FYB1 569 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms