RNA–Protein interactions for RNA: ENST00000555808.1

TIMELESS-204, Transcript of timeless circadian regulator, humanhuman

TSL 3

Gene TIMELESS, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-204ENST00000555808 FHOD3Q2V2M9 1422 aa12.97□□□□□ -0.33
TIMELESS-204ENST00000555808 NUP153P49790 1475 aaKnown RBP12.97□□□□□ -0.33
TIMELESS-204ENST00000555808 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.96□□□□□ -0.33
TIMELESS-204ENST00000555808 HNRNPUL2Q1KMD3 747 aaKnown RBP12.96□□□□□ -0.33
TIMELESS-204ENST00000555808 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.96□□□□□ -0.33
TIMELESS-204ENST00000555808 SETD1BQ9UPS6 1966 aaKnown RBP12.96□□□□□ -0.34
TIMELESS-204ENST00000555808 MYO5CQ9NQX4 1742 aa12.95□□□□□ -0.34
TIMELESS-204ENST00000555808 YEATS2Q9ULM3 1422 aa12.95□□□□□ -0.34
TIMELESS-204ENST00000555808 MAGI2Q86UL8 1455 aa12.94□□□□□ -0.34
TIMELESS-204ENST00000555808 ARHGEF12Q9NZN5 1544 aa12.93□□□□□ -0.34
TIMELESS-204ENST00000555808 MLECQ14165 292 aa12.91□□□□□ -0.34
TIMELESS-204ENST00000555808 C3P01024 1663 aa12.91□□□□□ -0.34
TIMELESS-204ENST00000555808 PLEKHD1A6NEE1 506 aa12.87□□□□□ -0.35
TIMELESS-204ENST00000555808 C9orf84Q5VXU9 1444 aa12.86□□□□□ -0.35
TIMELESS-204ENST00000555808 ATP10AO60312 1499 aa12.85□□□□□ -0.35
TIMELESS-204ENST00000555808 SUPT6HQ7KZ85 1726 aaKnown RBP12.85□□□□□ -0.35
TIMELESS-204ENST00000555808 DMRT2Q9Y5R5 561 aa12.85□□□□□ -0.35
TIMELESS-204ENST00000555808 UHRF1BP1Q6BDS2 1440 aa12.85□□□□□ -0.35
TIMELESS-204ENST00000555808 SCAPERQ9BY12 1400 aa12.84□□□□□ -0.35
TIMELESS-204ENST00000555808 CDK13Q14004 1512 aaKnown RBP12.83□□□□□ -0.35
TIMELESS-204ENST00000555808 LTBP4Q8N2S1 1624 aa12.83□□□□□ -0.36
TIMELESS-204ENST00000555808 CEBPAP49715 358 aaPredicted RBP12.82□□□□□ -0.36
TIMELESS-204ENST00000555808 IQSEC2Q5JU85 1478 aa12.82□□□□□ -0.36
TIMELESS-204ENST00000555808 DIP2CQ9Y2E4 1556 aa12.81□□□□□ -0.36
TIMELESS-204ENST00000555808 ABCA6Q8N139 1617 aa12.81□□□□□ -0.36
TIMELESS-204ENST00000555808 PTPRTO14522 1441 aa12.81□□□□□ -0.36
TIMELESS-204ENST00000555808 PLCH2O75038 1416 aa12.81□□□□□ -0.36
TIMELESS-204ENST00000555808 CDC42BPBQ9Y5S2 1711 aa12.81□□□□□ -0.36
TIMELESS-204ENST00000555808 KDM5CP41229 1560 aa12.81□□□□□ -0.36
TIMELESS-204ENST00000555808 REREQ9P2R6 1566 aa12.81□□□□□ -0.36
TIMELESS-204ENST00000555808 KIF14Q15058 1648 aa12.8□□□□□ -0.36
TIMELESS-204ENST00000555808 LRRIQ1Q96JM4 1722 aa12.79□□□□□ -0.36
TIMELESS-204ENST00000555808 RANGAP1P46060 587 aaPredicted RBP12.79□□□□□ -0.36
TIMELESS-204ENST00000555808 MROH2AA6NES4 1674 aa12.78□□□□□ -0.36
TIMELESS-204ENST00000555808 ZNF518AQ6AHZ1 1483 aa12.78□□□□□ -0.36
TIMELESS-204ENST00000555808 ITSN2Q9NZM3 1697 aa12.77□□□□□ -0.37
TIMELESS-204ENST00000555808 CSRNP3Q8WYN3 585 aa12.76□□□□□ -0.37
TIMELESS-204ENST00000555808 ARHGAP5Q13017 1502 aa12.75□□□□□ -0.37
TIMELESS-204ENST00000555808 KIDINS220Q9ULH0 1771 aa12.74□□□□□ -0.37
TIMELESS-204ENST00000555808 ZNF142P52746 1687 aaPredicted RBP12.73□□□□□ -0.37
TIMELESS-204ENST00000555808 CAMSAP1Q5T5Y3 1602 aa12.73□□□□□ -0.37
TIMELESS-204ENST00000555808 PREX2Q70Z35 1606 aa12.73□□□□□ -0.37
TIMELESS-204ENST00000555808 AGLP35573 1532 aa12.73□□□□□ -0.37
TIMELESS-204ENST00000555808 EFCAB2Q5VUJ9 269 aa12.73□□□□□ -0.37
TIMELESS-204ENST00000555808 NCOA1Q15788 1441 aa12.72□□□□□ -0.37
TIMELESS-204ENST00000555808 CDC42BPAQ5VT25 1732 aa12.71□□□□□ -0.37
TIMELESS-204ENST00000555808 TRAPPC8Q9Y2L5 1435 aa12.71□□□□□ -0.38
TIMELESS-204ENST00000555808 CLTCQ00610 1675 aaKnown RBP12.7□□□□□ -0.38
TIMELESS-204ENST00000555808 MYO3AQ8NEV4 1616 aa12.7□□□□□ -0.38
TIMELESS-204ENST00000555808 MYT1LQ9UL68 1186 aa12.7□□□□□ -0.38
TIMELESS-204ENST00000555808 MLH3Q9UHC1 1453 aa12.7□□□□□ -0.38
TIMELESS-204ENST00000555808 ABCC1P33527 1531 aa12.69□□□□□ -0.38
TIMELESS-204ENST00000555808 EEA1Q15075 1411 aa12.69□□□□□ -0.38
TIMELESS-204ENST00000555808 AFAP1Q8N556 730 aa12.68□□□□□ -0.38
TIMELESS-204ENST00000555808 ESF1Q9H501 851 aaKnown RBP12.68□□□□□ -0.38
TIMELESS-204ENST00000555808 POLR1AO95602 1720 aaPredicted RBP12.68□□□□□ -0.38
TIMELESS-204ENST00000555808 MED1Q15648 1581 aaPredicted RBP12.66□□□□□ -0.38
TIMELESS-204ENST00000555808 CNTLNQ9NXG0 1405 aa12.66□□□□□ -0.38
TIMELESS-204ENST00000555808 TROQ12816 1431 aaPredicted RBP12.65□□□□□ -0.38
TIMELESS-204ENST00000555808 ATP1B4Q9UN42 357 aaPredicted RBP12.65□□□□□ -0.38
TIMELESS-204ENST00000555808 CLIP1P30622 1438 aa12.64□□□□□ -0.39
TIMELESS-204ENST00000555808 FMN1Q68DA7 1419 aa12.64□□□□□ -0.39
TIMELESS-204ENST00000555808 UBAP1LF5GYI3 381 aa12.64□□□□□ -0.39
TIMELESS-204ENST00000555808 CDK11AQ9UQ88 783 aaPredicted RBP12.64□□□□□ -0.39
TIMELESS-204ENST00000555808 CEP170BQ9Y4F5 1589 aaPredicted RBP12.64□□□□□ -0.39
TIMELESS-204ENST00000555808 NPATQ14207 1427 aa12.63□□□□□ -0.39
TIMELESS-204ENST00000555808 ZNF335Q9H4Z2 1342 aaPredicted RBP12.62□□□□□ -0.39
TIMELESS-204ENST00000555808 SAMD9LQ8IVG5 1584 aa12.61□□□□□ -0.39
TIMELESS-204ENST00000555808 NCKAP5LQ9HCH0 1330 aa12.61□□□□□ -0.39
TIMELESS-204ENST00000555808 PLA2R1Q13018 1463 aa12.6□□□□□ -0.39
TIMELESS-204ENST00000555808 ARHGAP35Q9NRY4 1499 aa12.6□□□□□ -0.39
TIMELESS-204ENST00000555808 TCOF1Q13428 1488 aaKnown RBP12.59□□□□□ -0.39
TIMELESS-204ENST00000555808 ADGBQ8N7X0 1667 aa12.58□□□□□ -0.4
TIMELESS-204ENST00000555808 PLXNC1O60486 1568 aa12.57□□□□□ -0.4
TIMELESS-204ENST00000555808 INO80Q9ULG1 1556 aaPredicted RBP12.57□□□□□ -0.4
TIMELESS-204ENST00000555808 DNMT1P26358 1616 aaKnown RBP12.57□□□□□ -0.4
TIMELESS-204ENST00000555808 ZMYM3Q14202 1370 aa12.56□□□□□ -0.4
TIMELESS-204ENST00000555808 SYCP2Q9BX26 1530 aa12.56□□□□□ -0.4
TIMELESS-204ENST00000555808 PKD2Q13563 968 aa12.55□□□□□ -0.4
TIMELESS-204ENST00000555808 ATP7AQ04656 1500 aa12.55□□□□□ -0.4
TIMELESS-204ENST00000555808 NEURL4Q96JN8 1562 aa12.54□□□□□ -0.4
TIMELESS-204ENST00000555808 CCDC18Q5T9S5 1454 aa12.53□□□□□ -0.4
TIMELESS-204ENST00000555808 CPS1P31327 1500 aa12.53□□□□□ -0.4
TIMELESS-204ENST00000555808 SCAF1Q9H7N4 1312 aaKnown RBP12.53□□□□□ -0.4
TIMELESS-204ENST00000555808 PTPRKQ15262 1439 aa12.53□□□□□ -0.4
TIMELESS-204ENST00000555808 HSPA1LP34931 641 aa12.52□□□□□ -0.41
TIMELESS-204ENST00000555808 PPP6R1Q9UPN7 881 aa12.52□□□□□ -0.41
TIMELESS-204ENST00000555808 PIP4K2BP78356 416 aa12.5□□□□□ -0.41
TIMELESS-204ENST00000555808 A2ML1A8K2U0 1454 aa12.5□□□□□ -0.41
TIMELESS-204ENST00000555808 A2MP01023 1474 aa12.5□□□□□ -0.41
TIMELESS-204ENST00000555808 STRCP1A6NGW2 1772 aa12.5□□□□□ -0.41
TIMELESS-204ENST00000555808 UBTFP17480 764 aaKnown RBP12.49□□□□□ -0.41
TIMELESS-204ENST00000555808 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
TIMELESS-204ENST00000555808 ALKQ9UM73 1620 aa12.48□□□□□ -0.41
TIMELESS-204ENST00000555808 SHANK2Q9UPX8 1470 aa12.48□□□□□ -0.41
TIMELESS-204ENST00000555808 SPAG9O60271 1321 aaKnown RBP12.48□□□□□ -0.41
TIMELESS-204ENST00000555808 TOM1O60784 492 aa12.48□□□□□ -0.41
TIMELESS-204ENST00000555808 VWDEQ8N2E2 1590 aa12.47□□□□□ -0.41
TIMELESS-204ENST00000555808 ZNF777Q9ULD5 760 aaPredicted RBP12.47□□□□□ -0.41
TIMELESS-204ENST00000555808 CASKIN1Q8WXD9 1431 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms