RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 SCAPERQ9BY12 1400 aa31.92■■■□□ 2.7
SUPT16H-203ENST00000555752 CERKQ8TCT0 537 aa31.88■■■□□ 2.69
SUPT16H-203ENST00000555752 PLCH2O75038 1416 aa31.88■■■□□ 2.69
SUPT16H-203ENST00000555752 ARHGEF12Q9NZN5 1544 aa31.82■■■□□ 2.68
SUPT16H-203ENST00000555752 ATP10AO60312 1499 aa31.81■■■□□ 2.68
SUPT16H-203ENST00000555752 CEBPAP49715 358 aaPredicted RBP31.8■■■□□ 2.68
SUPT16H-203ENST00000555752 ATP1B4Q9UN42 357 aaPredicted RBP31.79■■■□□ 2.68
SUPT16H-203ENST00000555752 C9orf84Q5VXU9 1444 aa31.78■■■□□ 2.68
SUPT16H-203ENST00000555752 EHMT2Q96KQ7 1210 aa31.78■■■□□ 2.68
SUPT16H-203ENST00000555752 MYO5CQ9NQX4 1742 aa31.78■■■□□ 2.68
SUPT16H-203ENST00000555752 PREX1Q8TCU6 1659 aa31.75■■■□□ 2.67
SUPT16H-203ENST00000555752 KIF14Q15058 1648 aa31.75■■■□□ 2.67
SUPT16H-203ENST00000555752 EFCAB2Q5VUJ9 269 aa31.74■■■□□ 2.67
SUPT16H-203ENST00000555752 AFAP1Q8N556 730 aa31.68■■■□□ 2.66
SUPT16H-203ENST00000555752 STRCQ7RTU9 1775 aa31.68■■■□□ 2.66
SUPT16H-203ENST00000555752 FMN1Q68DA7 1419 aa31.66■■■□□ 2.66
SUPT16H-203ENST00000555752 ZNF518AQ6AHZ1 1483 aa31.65■■■□□ 2.66
SUPT16H-203ENST00000555752 ARHGAP35Q9NRY4 1499 aa31.65■■■□□ 2.66
SUPT16H-203ENST00000555752 ARHGAP5Q13017 1502 aa31.65■■■□□ 2.66
SUPT16H-203ENST00000555752 KDM5CP41229 1560 aa31.64■■■□□ 2.65
SUPT16H-203ENST00000555752 UBTFP17480 764 aaKnown RBP31.63■■■□□ 2.65
SUPT16H-203ENST00000555752 CDK11AQ9UQ88 783 aaPredicted RBP31.61■■■□□ 2.65
SUPT16H-203ENST00000555752 DIP2CQ9Y2E4 1556 aa31.6■■■□□ 2.65
SUPT16H-203ENST00000555752 TROQ12816 1431 aaPredicted RBP31.6■■■□□ 2.65
SUPT16H-203ENST00000555752 MYT1LQ9UL68 1186 aa31.6■■■□□ 2.65
SUPT16H-203ENST00000555752 LRRIQ1Q96JM4 1722 aa31.59■■■□□ 2.65
SUPT16H-203ENST00000555752 UHRF1BP1Q6BDS2 1440 aa31.58■■■□□ 2.65
SUPT16H-203ENST00000555752 ABCA6Q8N139 1617 aa31.56■■■□□ 2.64
SUPT16H-203ENST00000555752 CDC42BPBQ9Y5S2 1711 aa31.54■■■□□ 2.64
SUPT16H-203ENST00000555752 ILDR2Q71H61 639 aa31.53■■■□□ 2.64
SUPT16H-203ENST00000555752 DMRT2Q9Y5R5 561 aa31.53■■■□□ 2.64
SUPT16H-203ENST00000555752 CLIP1P30622 1438 aa31.52■■■□□ 2.64
SUPT16H-203ENST00000555752 C3P01024 1663 aa31.52■■■□□ 2.64
SUPT16H-203ENST00000555752 SETD1BQ9UPS6 1966 aaKnown RBP31.51■■■□□ 2.63
SUPT16H-203ENST00000555752 DISP3Q9P2K9 1392 aa31.51■■■□□ 2.63
SUPT16H-203ENST00000555752 REREQ9P2R6 1566 aa31.51■■■□□ 2.63
SUPT16H-203ENST00000555752 TRAPPC8Q9Y2L5 1435 aa31.49■■■□□ 2.63
SUPT16H-203ENST00000555752 MLH3Q9UHC1 1453 aa31.47■■■□□ 2.63
SUPT16H-203ENST00000555752 ABCC1P33527 1531 aa31.44■■■□□ 2.62
SUPT16H-203ENST00000555752 PREX2Q70Z35 1606 aa31.43■■■□□ 2.62
SUPT16H-203ENST00000555752 PTPRTO14522 1441 aa31.42■■■□□ 2.62
SUPT16H-203ENST00000555752 AGLP35573 1532 aa31.42■■■□□ 2.62
SUPT16H-203ENST00000555752 ITSN2Q9NZM3 1697 aa31.41■■■□□ 2.62
SUPT16H-203ENST00000555752 KIDINS220Q9ULH0 1771 aa31.38■■■□□ 2.61
SUPT16H-203ENST00000555752 ESF1Q9H501 851 aaKnown RBP31.38■■■□□ 2.61
SUPT16H-203ENST00000555752 LTBP4Q8N2S1 1624 aa31.36■■■□□ 2.61
SUPT16H-203ENST00000555752 NCOA1Q15788 1441 aa31.32■■■□□ 2.61
SUPT16H-203ENST00000555752 CDC42BPAQ5VT25 1732 aa31.32■■■□□ 2.61
SUPT16H-203ENST00000555752 SOCS7O14512 581 aa31.32■■■□□ 2.6
SUPT16H-203ENST00000555752 SPATA31D1Q6ZQQ2 1576 aa31.3■■■□□ 2.6
SUPT16H-203ENST00000555752 CASKIN1Q8WXD9 1431 aa31.28■■■□□ 2.6
SUPT16H-203ENST00000555752 CCDC18Q5T9S5 1454 aa31.27■■■□□ 2.6
SUPT16H-203ENST00000555752 CNTLNQ9NXG0 1405 aa31.27■■■□□ 2.6
SUPT16H-203ENST00000555752 SAMD9LQ8IVG5 1584 aa31.26■■■□□ 2.6
SUPT16H-203ENST00000555752 CAMSAP1Q5T5Y3 1602 aa31.25■■■□□ 2.59
SUPT16H-203ENST00000555752 ZNF777Q9ULD5 760 aaPredicted RBP31.25■■■□□ 2.59
SUPT16H-203ENST00000555752 SYCP2Q9BX26 1530 aa31.21■■■□□ 2.59
SUPT16H-203ENST00000555752 CHIC1Q5VXU3 224 aa31.21■■■□□ 2.59
SUPT16H-203ENST00000555752 MROH2AA6NES4 1674 aa31.21■■■□□ 2.59
SUPT16H-203ENST00000555752 SUPT6HQ7KZ85 1726 aaKnown RBP31.21■■■□□ 2.59
SUPT16H-203ENST00000555752 ZMYM3Q14202 1370 aa31.19■■■□□ 2.58
SUPT16H-203ENST00000555752 NPATQ14207 1427 aa31.19■■■□□ 2.58
SUPT16H-203ENST00000555752 IQSEC2Q5JU85 1478 aa31.19■■■□□ 2.58
SUPT16H-203ENST00000555752 NCKAP5LQ9HCH0 1330 aa31.19■■■□□ 2.58
SUPT16H-203ENST00000555752 HNRNPMP52272 730 aaKnown RBP eCLIP31.18■■■□□ 2.58
SUPT16H-203ENST00000555752 SPAG9O60271 1321 aaKnown RBP31.16■■■□□ 2.58
SUPT16H-203ENST00000555752 ZNF335Q9H4Z2 1342 aaPredicted RBP31.15■■■□□ 2.58
SUPT16H-203ENST00000555752 CLTCQ00610 1675 aaKnown RBP31.15■■■□□ 2.58
SUPT16H-203ENST00000555752 GPATCH8Q9UKJ3 1502 aaKnown RBP31.14■■■□□ 2.58
SUPT16H-203ENST00000555752 FYCO1Q9BQS8 1478 aa31.12■■■□□ 2.57
SUPT16H-203ENST00000555752 ATP7AQ04656 1500 aa31.11■■■□□ 2.57
SUPT16H-203ENST00000555752 MYO3AQ8NEV4 1616 aa31.1■■■□□ 2.57
SUPT16H-203ENST00000555752 PLXNC1O60486 1568 aa31.08■■■□□ 2.57
SUPT16H-203ENST00000555752 INO80Q9ULG1 1556 aaPredicted RBP31.08■■■□□ 2.57
SUPT16H-203ENST00000555752 ZNF142P52746 1687 aaPredicted RBP31.06■■■□□ 2.56
SUPT16H-203ENST00000555752 A2MP01023 1474 aa31.06■■■□□ 2.56
SUPT16H-203ENST00000555752 PTPRKQ15262 1439 aa31.05■■■□□ 2.56
SUPT16H-203ENST00000555752 UBAP1LF5GYI3 381 aa31.04■■■□□ 2.56
SUPT16H-203ENST00000555752 GGT6Q6P531 493 aa31.04■■■□□ 2.56
SUPT16H-203ENST00000555752 CEP170BQ9Y4F5 1589 aaPredicted RBP31.04■■■□□ 2.56
SUPT16H-203ENST00000555752 KIAA1107Q9UPP5 1409 aa31.02■■■□□ 2.56
SUPT16H-203ENST00000555752 CFDP1Q9UEE9 299 aaPredicted RBP31.02■■■□□ 2.56
SUPT16H-203ENST00000555752 PLA2R1Q13018 1463 aa31.01■■■□□ 2.55
SUPT16H-203ENST00000555752 TCOF1Q13428 1488 aaKnown RBP31■■■□□ 2.55
SUPT16H-203ENST00000555752 PKD2Q13563 968 aa30.98■■■□□ 2.55
SUPT16H-203ENST00000555752 PLEKHH2Q8IVE3 1493 aa30.97■■■□□ 2.55
SUPT16H-203ENST00000555752 CCNB3Q8WWL7 1395 aa30.97■■■□□ 2.55
SUPT16H-203ENST00000555752 ZNF644Q9H582 1327 aaPredicted RBP30.94■■■□□ 2.54
SUPT16H-203ENST00000555752 ADGBQ8N7X0 1667 aa30.92■■■□□ 2.54
SUPT16H-203ENST00000555752 PPP6R1Q9UPN7 881 aa30.91■■■□□ 2.54
SUPT16H-203ENST00000555752 MTUS2Q5JR59 1369 aa30.88■■■□□ 2.53
SUPT16H-203ENST00000555752 DNMT1P26358 1616 aaKnown RBP30.87■■■□□ 2.53
SUPT16H-203ENST00000555752 A2ML1A8K2U0 1454 aa30.86■■■□□ 2.53
SUPT16H-203ENST00000555752 TIAM1Q13009 1591 aa30.85■■■□□ 2.53
SUPT16H-203ENST00000555752 MBD5Q9P267 1494 aa30.85■■■□□ 2.53
SUPT16H-203ENST00000555752 FBXO31Q5XUX0 539 aaPredicted RBP30.81■■■□□ 2.52
SUPT16H-203ENST00000555752 NEURL4Q96JN8 1562 aa30.79■■■□□ 2.52
SUPT16H-203ENST00000555752 SCAF1Q9H7N4 1312 aaKnown RBP30.79■■■□□ 2.52
SUPT16H-203ENST00000555752 POLR1AO95602 1720 aaPredicted RBP30.78■■■□□ 2.52
SUPT16H-203ENST00000555752 HSPA1LP34931 641 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms