RNA–Protein interactions for RNA: ENST00000555371.1

NFKBIA-204, Transcript of NFKB inhibitor alpha, humanhuman

TSL 3

Gene NFKBIA, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-204ENST00000555371 CFAP74Q9C0B2 1584 aa18.61■□□□□ 0.57
NFKBIA-204ENST00000555371 SETD1BQ9UPS6 1966 aaKnown RBP18.61■□□□□ 0.57
NFKBIA-204ENST00000555371 PHF23Q9BUL5 403 aaPredicted RBP18.6■□□□□ 0.57
NFKBIA-204ENST00000555371 HECW1Q76N89 1606 aa18.6■□□□□ 0.57
NFKBIA-204ENST00000555371 SCAF1Q9H7N4 1312 aaKnown RBP18.56■□□□□ 0.56
NFKBIA-204ENST00000555371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.54■□□□□ 0.56
NFKBIA-204ENST00000555371 HSPA1LP34931 641 aa18.54■□□□□ 0.56
NFKBIA-204ENST00000555371 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
NFKBIA-204ENST00000555371 NCOA1Q15788 1441 aa18.54■□□□□ 0.56
NFKBIA-204ENST00000555371 C3P01024 1663 aa18.54■□□□□ 0.56
NFKBIA-204ENST00000555371 ZNF335Q9H4Z2 1342 aaPredicted RBP18.53■□□□□ 0.56
NFKBIA-204ENST00000555371 MAGI2Q86UL8 1455 aa18.52■□□□□ 0.56
NFKBIA-204ENST00000555371 C9orf84Q5VXU9 1444 aa18.51■□□□□ 0.55
NFKBIA-204ENST00000555371 RAPGEF6Q8TEU7 1601 aa18.5■□□□□ 0.55
NFKBIA-204ENST00000555371 P3H3Q8IVL6 736 aa18.49■□□□□ 0.55
NFKBIA-204ENST00000555371 ATP10AO60312 1499 aa18.47■□□□□ 0.55
NFKBIA-204ENST00000555371 PIP4K2BP78356 416 aa18.47■□□□□ 0.55
NFKBIA-204ENST00000555371 CAMSAP1Q5T5Y3 1602 aa18.47■□□□□ 0.55
NFKBIA-204ENST00000555371 FAM9AQ8IZU1 332 aaPredicted RBP18.44■□□□□ 0.54
NFKBIA-204ENST00000555371 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.44■□□□□ 0.54
NFKBIA-204ENST00000555371 SCAPERQ9BY12 1400 aa18.4■□□□□ 0.54
NFKBIA-204ENST00000555371 NCKAP5LQ9HCH0 1330 aa18.4■□□□□ 0.54
NFKBIA-204ENST00000555371 SUPT6HQ7KZ85 1726 aaKnown RBP18.39■□□□□ 0.53
NFKBIA-204ENST00000555371 TRAPPC8Q9Y2L5 1435 aa18.38■□□□□ 0.53
NFKBIA-204ENST00000555371 NUP153P49790 1475 aaKnown RBP18.38■□□□□ 0.53
NFKBIA-204ENST00000555371 SENP3Q9H4L4 574 aaPredicted RBP18.36■□□□□ 0.53
NFKBIA-204ENST00000555371 ESF1Q9H501 851 aaKnown RBP18.32■□□□□ 0.52
NFKBIA-204ENST00000555371 DIP2CQ9Y2E4 1556 aa18.32■□□□□ 0.52
NFKBIA-204ENST00000555371 SAMD9Q5K651 1589 aa18.31■□□□□ 0.52
NFKBIA-204ENST00000555371 PLEKHD1A6NEE1 506 aa18.3■□□□□ 0.52
NFKBIA-204ENST00000555371 TOM1O60784 492 aa18.29■□□□□ 0.52
NFKBIA-204ENST00000555371 MYT1LQ9UL68 1186 aa18.29■□□□□ 0.52
NFKBIA-204ENST00000555371 ABCA6Q8N139 1617 aa18.29■□□□□ 0.52
NFKBIA-204ENST00000555371 SETD1AO15047 1707 aaKnown RBP18.28■□□□□ 0.52
NFKBIA-204ENST00000555371 MYO3AQ8NEV4 1616 aa18.27■□□□□ 0.52
NFKBIA-204ENST00000555371 ZNF142P52746 1687 aaPredicted RBP18.27■□□□□ 0.52
NFKBIA-204ENST00000555371 MYO5CQ9NQX4 1742 aa18.26■□□□□ 0.51
NFKBIA-204ENST00000555371 PPP6R1Q9UPN7 881 aa18.24■□□□□ 0.51
NFKBIA-204ENST00000555371 ZNF518AQ6AHZ1 1483 aa18.24■□□□□ 0.51
NFKBIA-204ENST00000555371 KDM5CP41229 1560 aa18.24■□□□□ 0.51
NFKBIA-204ENST00000555371 REREQ9P2R6 1566 aa18.24■□□□□ 0.51
NFKBIA-204ENST00000555371 PLA2R1Q13018 1463 aa18.23■□□□□ 0.51
NFKBIA-204ENST00000555371 RGS17Q9UGC6 210 aaPredicted RBP18.23■□□□□ 0.51
NFKBIA-204ENST00000555371 TCOF1Q13428 1488 aaKnown RBP18.22■□□□□ 0.51
NFKBIA-204ENST00000555371 PLCH2O75038 1416 aa18.22■□□□□ 0.51
NFKBIA-204ENST00000555371 ALKQ9UM73 1620 aa18.21■□□□□ 0.51
NFKBIA-204ENST00000555371 PKD2Q13563 968 aa18.21■□□□□ 0.51
NFKBIA-204ENST00000555371 CPS1P31327 1500 aa18.21■□□□□ 0.51
NFKBIA-204ENST00000555371 AGLP35573 1532 aa18.21■□□□□ 0.51
NFKBIA-204ENST00000555371 MROH2AA6NES4 1674 aa18.21■□□□□ 0.51
NFKBIA-204ENST00000555371 CEP170BQ9Y4F5 1589 aaPredicted RBP18.21■□□□□ 0.51
NFKBIA-204ENST00000555371 NPATQ14207 1427 aa18.2■□□□□ 0.5
NFKBIA-204ENST00000555371 CNTLNQ9NXG0 1405 aa18.2■□□□□ 0.5
NFKBIA-204ENST00000555371 AFAP1Q8N556 730 aa18.18■□□□□ 0.5
NFKBIA-204ENST00000555371 PRXQ9BXM0 1461 aa18.17■□□□□ 0.5
NFKBIA-204ENST00000555371 CDK13Q14004 1512 aaKnown RBP18.17■□□□□ 0.5
NFKBIA-204ENST00000555371 POLR1AO95602 1720 aaPredicted RBP18.16■□□□□ 0.5
NFKBIA-204ENST00000555371 PTPRKQ15262 1439 aa18.15■□□□□ 0.5
NFKBIA-204ENST00000555371 RANGAP1P46060 587 aaPredicted RBP18.15■□□□□ 0.5
NFKBIA-204ENST00000555371 CLTCQ00610 1675 aaKnown RBP18.14■□□□□ 0.49
NFKBIA-204ENST00000555371 SHANK2Q9UPX8 1470 aa18.14■□□□□ 0.49
NFKBIA-204ENST00000555371 EFCAB2Q5VUJ9 269 aa18.13■□□□□ 0.49
NFKBIA-204ENST00000555371 ARHGAP5Q13017 1502 aa18.13■□□□□ 0.49
NFKBIA-204ENST00000555371 POTEAQ6S8J7 498 aa18.12■□□□□ 0.49
NFKBIA-204ENST00000555371 NEURL4Q96JN8 1562 aa18.1■□□□□ 0.49
NFKBIA-204ENST00000555371 KIF14Q15058 1648 aa18.09■□□□□ 0.49
NFKBIA-204ENST00000555371 ZMYM3Q14202 1370 aa18.09■□□□□ 0.49
NFKBIA-204ENST00000555371 MLH3Q9UHC1 1453 aa18.07■□□□□ 0.48
NFKBIA-204ENST00000555371 KIDINS220Q9ULH0 1771 aa18.07■□□□□ 0.48
NFKBIA-204ENST00000555371 RNF17Q9BXT8 1623 aaKnown RBP18.06■□□□□ 0.48
NFKBIA-204ENST00000555371 VWDEQ8N2E2 1590 aa18.06■□□□□ 0.48
NFKBIA-204ENST00000555371 DNMT1P26358 1616 aaKnown RBP18.05■□□□□ 0.48
NFKBIA-204ENST00000555371 ITSN2Q9NZM3 1697 aa18.04■□□□□ 0.48
NFKBIA-204ENST00000555371 CDC42BPBQ9Y5S2 1711 aa18.01■□□□□ 0.47
NFKBIA-204ENST00000555371 STRCP1A6NGW2 1772 aa18■□□□□ 0.47
NFKBIA-204ENST00000555371 ABCC1P33527 1531 aa18■□□□□ 0.47
NFKBIA-204ENST00000555371 A2ML1A8K2U0 1454 aa18■□□□□ 0.47
NFKBIA-204ENST00000555371 SYNMO15061 1565 aa17.96■□□□□ 0.46
NFKBIA-204ENST00000555371 LRRC7Q96NW7 1537 aa17.94■□□□□ 0.46
NFKBIA-204ENST00000555371 PREX2Q70Z35 1606 aa17.93■□□□□ 0.46
NFKBIA-204ENST00000555371 UPF1Q92900 1129 aaKnown RBP eCLIP17.92■□□□□ 0.46
NFKBIA-204ENST00000555371 ATP1B4Q9UN42 357 aaPredicted RBP17.92■□□□□ 0.46
NFKBIA-204ENST00000555371 IQGAP1P46940 1657 aa17.91■□□□□ 0.46
NFKBIA-204ENST00000555371 SRCAPQ6ZRS2 3230 aa17.91■□□□□ 0.46
NFKBIA-204ENST00000555371 NPHP4O75161 1426 aaPredicted RBP17.89■□□□□ 0.46
NFKBIA-204ENST00000555371 SAMD9LQ8IVG5 1584 aa17.89■□□□□ 0.45
NFKBIA-204ENST00000555371 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.87■□□□□ 0.45
NFKBIA-204ENST00000555371 PLXNC1O60486 1568 aa17.87■□□□□ 0.45
NFKBIA-204ENST00000555371 GGT6Q6P531 493 aa17.86■□□□□ 0.45
NFKBIA-204ENST00000555371 TROQ12816 1431 aaPredicted RBP17.86■□□□□ 0.45
NFKBIA-204ENST00000555371 DEPDC5O75140 1603 aa17.85■□□□□ 0.45
NFKBIA-204ENST00000555371 CLIP1P30622 1438 aa17.85■□□□□ 0.45
NFKBIA-204ENST00000555371 ANKLE2Q86XL3 938 aa17.85■□□□□ 0.45
NFKBIA-204ENST00000555371 XIRP1Q702N8 1843 aaKnown RBP17.84■□□□□ 0.45
NFKBIA-204ENST00000555371 TNRQ92752 1358 aa17.83■□□□□ 0.45
NFKBIA-204ENST00000555371 TRIM52Q96A61 297 aa17.83■□□□□ 0.44
NFKBIA-204ENST00000555371 ATP7AQ04656 1500 aa17.82■□□□□ 0.44
NFKBIA-204ENST00000555371 SYCP2Q9BX26 1530 aa17.82■□□□□ 0.44
NFKBIA-204ENST00000555371 CDK11AQ9UQ88 783 aaPredicted RBP17.81■□□□□ 0.44
NFKBIA-204ENST00000555371 MED14O60244 1454 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms