RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 CASKIN1Q8WXD9 1431 aa13.6□□□□□ -0.23
TRIM9-204ENST00000555170 FYCO1Q9BQS8 1478 aa13.6□□□□□ -0.23
TRIM9-204ENST00000555170 ARHGEF40Q8TER5 1519 aa13.59□□□□□ -0.23
TRIM9-204ENST00000555170 TTC37Q6PGP7 1564 aa13.58□□□□□ -0.23
TRIM9-204ENST00000555170 DENND4BO75064 1496 aaPredicted RBP13.58□□□□□ -0.24
TRIM9-204ENST00000555170 SIGLEC1Q9BZZ2 1709 aa13.58□□□□□ -0.24
TRIM9-204ENST00000555170 STRCQ7RTU9 1775 aa13.58□□□□□ -0.24
TRIM9-204ENST00000555170 AKNAQ7Z591 1439 aa13.57□□□□□ -0.24
TRIM9-204ENST00000555170 FANCAO15360 1455 aa13.57□□□□□ -0.24
TRIM9-204ENST00000555170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.57□□□□□ -0.24
TRIM9-204ENST00000555170 HNRNPUL2Q1KMD3 747 aaKnown RBP13.57□□□□□ -0.24
TRIM9-204ENST00000555170 KIF14Q15058 1648 aa13.57□□□□□ -0.24
TRIM9-204ENST00000555170 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.56□□□□□ -0.24
TRIM9-204ENST00000555170 CCDC18Q5T9S5 1454 aa13.55□□□□□ -0.24
TRIM9-204ENST00000555170 ATP1B4Q9UN42 357 aaPredicted RBP13.55□□□□□ -0.24
TRIM9-204ENST00000555170 RICTORQ6R327 1708 aa13.53□□□□□ -0.24
TRIM9-204ENST00000555170 PREX1Q8TCU6 1659 aa13.52□□□□□ -0.25
TRIM9-204ENST00000555170 FER1L4A9Z1Z3 1794 aa13.51□□□□□ -0.25
TRIM9-204ENST00000555170 MYO5CQ9NQX4 1742 aa13.51□□□□□ -0.25
TRIM9-204ENST00000555170 LTBP4Q8N2S1 1624 aa13.51□□□□□ -0.25
TRIM9-204ENST00000555170 PTPRTO14522 1441 aa13.51□□□□□ -0.25
TRIM9-204ENST00000555170 TROQ12816 1431 aaPredicted RBP13.51□□□□□ -0.25
TRIM9-204ENST00000555170 PLEKHD1A6NEE1 506 aa13.51□□□□□ -0.25
TRIM9-204ENST00000555170 ZFYVE16Q7Z3T8 1539 aa13.5□□□□□ -0.25
TRIM9-204ENST00000555170 VPS8Q8N3P4 1428 aa13.48□□□□□ -0.25
TRIM9-204ENST00000555170 ZMYM4Q5VZL5 1548 aa13.48□□□□□ -0.25
TRIM9-204ENST00000555170 ARHGEF12Q9NZN5 1544 aa13.48□□□□□ -0.25
TRIM9-204ENST00000555170 UHRF1BP1Q6BDS2 1440 aa13.47□□□□□ -0.25
TRIM9-204ENST00000555170 CFAP74Q9C0B2 1584 aa13.47□□□□□ -0.25
TRIM9-204ENST00000555170 MAGI2Q86UL8 1455 aa13.47□□□□□ -0.25
TRIM9-204ENST00000555170 UBAP1LF5GYI3 381 aa13.46□□□□□ -0.25
TRIM9-204ENST00000555170 IQSEC2Q5JU85 1478 aa13.46□□□□□ -0.25
TRIM9-204ENST00000555170 PREX2Q70Z35 1606 aa13.46□□□□□ -0.26
TRIM9-204ENST00000555170 CDC42BPAQ5VT25 1732 aa13.45□□□□□ -0.26
TRIM9-204ENST00000555170 CDC42BPBQ9Y5S2 1711 aa13.45□□□□□ -0.26
TRIM9-204ENST00000555170 TIAM1Q13009 1591 aa13.45□□□□□ -0.26
TRIM9-204ENST00000555170 EHBP1L1Q8N3D4 1523 aa13.44□□□□□ -0.26
TRIM9-204ENST00000555170 ATP10AO60312 1499 aa13.43□□□□□ -0.26
TRIM9-204ENST00000555170 CDK11AQ9UQ88 783 aaPredicted RBP13.43□□□□□ -0.26
TRIM9-204ENST00000555170 SCAPERQ9BY12 1400 aa13.42□□□□□ -0.26
TRIM9-204ENST00000555170 PLCH2O75038 1416 aa13.41□□□□□ -0.26
TRIM9-204ENST00000555170 SETD1BQ9UPS6 1966 aaKnown RBP13.41□□□□□ -0.26
TRIM9-204ENST00000555170 C9orf84Q5VXU9 1444 aa13.39□□□□□ -0.27
TRIM9-204ENST00000555170 ARHGAP5Q13017 1502 aa13.39□□□□□ -0.27
TRIM9-204ENST00000555170 ZNF335Q9H4Z2 1342 aaPredicted RBP13.39□□□□□ -0.27
TRIM9-204ENST00000555170 HSPA1LP34931 641 aa13.38□□□□□ -0.27
TRIM9-204ENST00000555170 MTUS2Q5JR59 1369 aa13.37□□□□□ -0.27
TRIM9-204ENST00000555170 SUPT6HQ7KZ85 1726 aaKnown RBP13.37□□□□□ -0.27
TRIM9-204ENST00000555170 NCOA1Q15788 1441 aa13.37□□□□□ -0.27
TRIM9-204ENST00000555170 ITSN2Q9NZM3 1697 aa13.37□□□□□ -0.27
TRIM9-204ENST00000555170 ABCC1P33527 1531 aa13.36□□□□□ -0.27
TRIM9-204ENST00000555170 MAP3K1Q13233 1512 aa13.36□□□□□ -0.27
TRIM9-204ENST00000555170 SAMD9LQ8IVG5 1584 aa13.36□□□□□ -0.27
TRIM9-204ENST00000555170 NCKAP5LQ9HCH0 1330 aa13.36□□□□□ -0.27
TRIM9-204ENST00000555170 GPATCH8Q9UKJ3 1502 aaKnown RBP13.35□□□□□ -0.27
TRIM9-204ENST00000555170 MED1Q15648 1581 aaPredicted RBP13.35□□□□□ -0.27
TRIM9-204ENST00000555170 LRRC9Q6ZRR7 1453 aa13.35□□□□□ -0.27
TRIM9-204ENST00000555170 TRAPPC8Q9Y2L5 1435 aa13.34□□□□□ -0.27
TRIM9-204ENST00000555170 AFAP1Q8N556 730 aa13.33□□□□□ -0.28
TRIM9-204ENST00000555170 NCOA2Q15596 1464 aa13.33□□□□□ -0.28
TRIM9-204ENST00000555170 SCAF1Q9H7N4 1312 aaKnown RBP13.33□□□□□ -0.28
TRIM9-204ENST00000555170 C3P01024 1663 aa13.32□□□□□ -0.28
TRIM9-204ENST00000555170 PIP4K2BP78356 416 aa13.32□□□□□ -0.28
TRIM9-204ENST00000555170 ESF1Q9H501 851 aaKnown RBP13.32□□□□□ -0.28
TRIM9-204ENST00000555170 MYT1LQ9UL68 1186 aa13.32□□□□□ -0.28
TRIM9-204ENST00000555170 EFCAB2Q5VUJ9 269 aa13.31□□□□□ -0.28
TRIM9-204ENST00000555170 PHF23Q9BUL5 403 aaPredicted RBP13.31□□□□□ -0.28
TRIM9-204ENST00000555170 KDM5CP41229 1560 aa13.31□□□□□ -0.28
TRIM9-204ENST00000555170 SYCP2Q9BX26 1530 aa13.3□□□□□ -0.28
TRIM9-204ENST00000555170 CAMSAP1Q5T5Y3 1602 aa13.3□□□□□ -0.28
TRIM9-204ENST00000555170 CCNB3Q8WWL7 1395 aa13.3□□□□□ -0.28
TRIM9-204ENST00000555170 KANK4Q5T7N3 995 aaPredicted RBP13.29□□□□□ -0.28
TRIM9-204ENST00000555170 ZNF518AQ6AHZ1 1483 aa13.27□□□□□ -0.29
TRIM9-204ENST00000555170 ABCA6Q8N139 1617 aa13.26□□□□□ -0.29
TRIM9-204ENST00000555170 KIDINS220Q9ULH0 1771 aa13.25□□□□□ -0.29
TRIM9-204ENST00000555170 DIP2CQ9Y2E4 1556 aa13.24□□□□□ -0.29
TRIM9-204ENST00000555170 CAMSAP2Q08AD1 1489 aa13.24□□□□□ -0.29
TRIM9-204ENST00000555170 TOM1O60784 492 aa13.24□□□□□ -0.29
TRIM9-204ENST00000555170 PKD2Q13563 968 aa13.24□□□□□ -0.29
TRIM9-204ENST00000555170 ZNF777Q9ULD5 760 aaPredicted RBP13.23□□□□□ -0.29
TRIM9-204ENST00000555170 INO80Q9ULG1 1556 aaPredicted RBP13.23□□□□□ -0.29
TRIM9-204ENST00000555170 CFDP1Q9UEE9 299 aaPredicted RBP13.22□□□□□ -0.29
TRIM9-204ENST00000555170 PLEKHH2Q8IVE3 1493 aa13.22□□□□□ -0.29
TRIM9-204ENST00000555170 ZNF644Q9H582 1327 aaPredicted RBP13.21□□□□□ -0.29
TRIM9-204ENST00000555170 PPP6R1Q9UPN7 881 aa13.21□□□□□ -0.29
TRIM9-204ENST00000555170 AGLP35573 1532 aa13.21□□□□□ -0.29
TRIM9-204ENST00000555170 MLH3Q9UHC1 1453 aa13.21□□□□□ -0.3
TRIM9-204ENST00000555170 MYOM3Q5VTT5 1437 aa13.21□□□□□ -0.3
TRIM9-204ENST00000555170 KIAA1107Q9UPP5 1409 aa13.21□□□□□ -0.3
TRIM9-204ENST00000555170 ZMYM3Q14202 1370 aa13.2□□□□□ -0.3
TRIM9-204ENST00000555170 REREQ9P2R6 1566 aa13.2□□□□□ -0.3
TRIM9-204ENST00000555170 SENP3Q9H4L4 574 aaPredicted RBP13.2□□□□□ -0.3
TRIM9-204ENST00000555170 MBD5Q9P267 1494 aa13.2□□□□□ -0.3
TRIM9-204ENST00000555170 NPATQ14207 1427 aa13.2□□□□□ -0.3
TRIM9-204ENST00000555170 CNTLNQ9NXG0 1405 aa13.2□□□□□ -0.3
TRIM9-204ENST00000555170 ATP7AQ04656 1500 aa13.19□□□□□ -0.3
TRIM9-204ENST00000555170 RGS17Q9UGC6 210 aaPredicted RBP13.19□□□□□ -0.3
TRIM9-204ENST00000555170 TCOF1Q13428 1488 aaKnown RBP13.18□□□□□ -0.3
TRIM9-204ENST00000555170 HNRNPMP52272 730 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRIM9-204ENST00000555170 APLP2Q06481 763 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms