RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 CAMSAP2Q08AD1 1489 aa30.41■■■□□ 2.46
ARHGEF40-204ENST00000555038 KIF14Q15058 1648 aa30.4■■■□□ 2.46
ARHGEF40-204ENST00000555038 DENND4BO75064 1496 aaPredicted RBP30.38■■■□□ 2.45
ARHGEF40-204ENST00000555038 ADGBQ8N7X0 1667 aa30.37■■■□□ 2.45
ARHGEF40-204ENST00000555038 CFDP1Q9UEE9 299 aaPredicted RBP30.36■■■□□ 2.45
ARHGEF40-204ENST00000555038 ATP10BO94823 1461 aa30.36■■■□□ 2.45
ARHGEF40-204ENST00000555038 ADGRL2O95490 1459 aa30.34■■■□□ 2.45
ARHGEF40-204ENST00000555038 YTHDC1Q96MU7 727 aaKnown RBP30.34■■■□□ 2.45
ARHGEF40-204ENST00000555038 CHD1O14646 1710 aa30.34■■■□□ 2.45
ARHGEF40-204ENST00000555038 CROCC2H7BZ55 1655 aa30.34■■■□□ 2.45
ARHGEF40-204ENST00000555038 PLEKHD1A6NEE1 506 aa30.33■■■□□ 2.45
ARHGEF40-204ENST00000555038 TRIM52Q96A61 297 aa30.33■■■□□ 2.45
ARHGEF40-204ENST00000555038 KDM5BQ9UGL1 1544 aa30.33■■■□□ 2.45
ARHGEF40-204ENST00000555038 MPHOSPH9Q99550 1183 aa30.32■■■□□ 2.44
ARHGEF40-204ENST00000555038 ZNF644Q9H582 1327 aaPredicted RBP30.32■■■□□ 2.44
ARHGEF40-204ENST00000555038 ABCC10Q5T3U5 1492 aa30.31■■■□□ 2.44
ARHGEF40-204ENST00000555038 SHROOM2Q13796 1616 aa30.31■■■□□ 2.44
ARHGEF40-204ENST00000555038 PTPRGP23470 1445 aa30.3■■■□□ 2.44
ARHGEF40-204ENST00000555038 CDC42BPAQ5VT25 1732 aa30.27■■■□□ 2.44
ARHGEF40-204ENST00000555038 GTF3C3Q9Y5Q9 886 aa30.27■■■□□ 2.44
ARHGEF40-204ENST00000555038 NCOA1Q15788 1441 aa30.25■■■□□ 2.43
ARHGEF40-204ENST00000555038 SHANK2Q9UPX8 1470 aa30.25■■■□□ 2.43
ARHGEF40-204ENST00000555038 ANKRD30AQ9BXX3 1397 aa30.19■■■□□ 2.42
ARHGEF40-204ENST00000555038 ANKRD30BQ9BXX2 1392 aa30.18■■■□□ 2.42
ARHGEF40-204ENST00000555038 RPRD2Q5VT52 1461 aaKnown RBP30.16■■■□□ 2.42
ARHGEF40-204ENST00000555038 ARHGEF5Q12774 1597 aa30.14■■■□□ 2.42
ARHGEF40-204ENST00000555038 DDX10Q13206 875 aaKnown RBP30.11■■■□□ 2.41
ARHGEF40-204ENST00000555038 PZPP20742 1482 aa30.11■■■□□ 2.41
ARHGEF40-204ENST00000555038 ZNF777Q9ULD5 760 aaPredicted RBP30.1■■■□□ 2.41
ARHGEF40-204ENST00000555038 SLC4A1APQ9BWU0 796 aaKnown RBP30.08■■■□□ 2.41
ARHGEF40-204ENST00000555038 PREX2Q70Z35 1606 aa30.08■■■□□ 2.41
ARHGEF40-204ENST00000555038 C9orf84Q5VXU9 1444 aa30.07■■■□□ 2.4
ARHGEF40-204ENST00000555038 ABCC2Q92887 1545 aa30.06■■■□□ 2.4
ARHGEF40-204ENST00000555038 ANKRD50Q9ULJ7 1429 aa30.05■■■□□ 2.4
ARHGEF40-204ENST00000555038 TEX14Q8IWB6 1497 aa30.04■■■□□ 2.4
ARHGEF40-204ENST00000555038 RSPH4AQ5TD94 716 aa30.02■■■□□ 2.4
ARHGEF40-204ENST00000555038 CLASP1Q7Z460 1538 aa30.02■■■□□ 2.4
ARHGEF40-204ENST00000555038 KIAA1107Q9UPP5 1409 aa30.01■■■□□ 2.4
ARHGEF40-204ENST00000555038 L3MBTL2Q969R5 705 aa30■■■□□ 2.39
ARHGEF40-204ENST00000555038 KDM5DQ9BY66 1539 aa30■■■□□ 2.39
ARHGEF40-204ENST00000555038 CDC42BPBQ9Y5S2 1711 aa29.99■■■□□ 2.39
ARHGEF40-204ENST00000555038 MBD5Q9P267 1494 aa29.99■■■□□ 2.39
ARHGEF40-204ENST00000555038 TSPY4P0CV99 314 aa29.99■■■□□ 2.39
ARHGEF40-204ENST00000555038 TSPY10P0CW01 314 aa29.99■■■□□ 2.39
ARHGEF40-204ENST00000555038 CCER2I3L3R5 266 aa29.98■■■□□ 2.39
ARHGEF40-204ENST00000555038 CCDC141Q6ZP82 1450 aa29.98■■■□□ 2.39
ARHGEF40-204ENST00000555038 SAMD9LQ8IVG5 1584 aa29.97■■■□□ 2.39
ARHGEF40-204ENST00000555038 FOXD1Q16676 465 aa29.97■■■□□ 2.39
ARHGEF40-204ENST00000555038 HIRIP3Q9BW71 556 aaPredicted RBP29.96■■■□□ 2.39
ARHGEF40-204ENST00000555038 UHRF1BP1LA0JNW5 1464 aa29.94■■■□□ 2.38
ARHGEF40-204ENST00000555038 ANP32CO43423 234 aa29.94■■■□□ 2.38
ARHGEF40-204ENST00000555038 EIF4G2P78344 907 aaKnown RBP eCLIP29.94■■■□□ 2.38
ARHGEF40-204ENST00000555038 ERCC6L2Q5T890 1561 aa29.92■■■□□ 2.38
ARHGEF40-204ENST00000555038 MAST1Q9Y2H9 1570 aa29.92■■■□□ 2.38
ARHGEF40-204ENST00000555038 PLEKHH2Q8IVE3 1493 aa29.9■■■□□ 2.38
ARHGEF40-204ENST00000555038 HSPA5P11021 654 aaKnown RBP29.9■■■□□ 2.38
ARHGEF40-204ENST00000555038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.9■■■□□ 2.38
ARHGEF40-204ENST00000555038 KIF15Q9NS87 1388 aa29.89■■■□□ 2.37
ARHGEF40-204ENST00000555038 TTC37Q6PGP7 1564 aa29.88■■■□□ 2.37
ARHGEF40-204ENST00000555038 MYO5CQ9NQX4 1742 aa29.87■■■□□ 2.37
ARHGEF40-204ENST00000555038 ARHGAP5Q13017 1502 aa29.84■■■□□ 2.37
ARHGEF40-204ENST00000555038 HNRNPMP52272 730 aaKnown RBP eCLIP29.83■■■□□ 2.37
ARHGEF40-204ENST00000555038 PKD2Q13563 968 aa29.83■■■□□ 2.37
ARHGEF40-204ENST00000555038 NUP155O75694 1391 aa29.83■■■□□ 2.37
ARHGEF40-204ENST00000555038 ZCCHC11Q5TAX3 1644 aaKnown RBP29.8■■■□□ 2.36
ARHGEF40-204ENST00000555038 SYCP2Q9BX26 1530 aa29.79■■■□□ 2.36
ARHGEF40-204ENST00000555038 PLXNC1O60486 1568 aa29.78■■■□□ 2.36
ARHGEF40-204ENST00000555038 WASHC2AQ641Q2 1341 aa29.78■■■□□ 2.36
ARHGEF40-204ENST00000555038 NBPF8Q3BBV2 869 aa29.77■■■□□ 2.36
ARHGEF40-204ENST00000555038 ARHGEF12Q9NZN5 1544 aa29.76■■■□□ 2.36
ARHGEF40-204ENST00000555038 KCNH8Q96L42 1107 aa29.76■■■□□ 2.35
ARHGEF40-204ENST00000555038 SPATA31E1Q6ZUB1 1445 aa29.76■■■□□ 2.35
ARHGEF40-204ENST00000555038 PELP1Q8IZL8 1130 aaKnown RBP29.75■■■□□ 2.35
ARHGEF40-204ENST00000555038 POLR1AO95602 1720 aaPredicted RBP29.74■■■□□ 2.35
ARHGEF40-204ENST00000555038 PLCH2O75038 1416 aa29.72■■■□□ 2.35
ARHGEF40-204ENST00000555038 UNC13BO14795 1591 aa29.72■■■□□ 2.35
ARHGEF40-204ENST00000555038 UHRF1BP1Q6BDS2 1440 aa29.72■■■□□ 2.35
ARHGEF40-204ENST00000555038 CNTLNQ9NXG0 1405 aa29.71■■■□□ 2.35
ARHGEF40-204ENST00000555038 CCDC7Q96M83 1385 aa29.69■■■□□ 2.34
ARHGEF40-204ENST00000555038 ARAP3Q8WWN8 1544 aa29.69■■■□□ 2.34
ARHGEF40-204ENST00000555038 FAM135AQ9P2D6 1515 aa29.69■■■□□ 2.34
ARHGEF40-204ENST00000555038 DUOX2Q9NRD8 1548 aa29.64■■■□□ 2.34
ARHGEF40-204ENST00000555038 EFCAB2Q5VUJ9 269 aa29.62■■■□□ 2.33
ARHGEF40-204ENST00000555038 ABCC1P33527 1531 aa29.62■■■□□ 2.33
ARHGEF40-204ENST00000555038 RALGAPBQ86X10 1494 aa29.62■■■□□ 2.33
ARHGEF40-204ENST00000555038 ERBINQ96RT1 1412 aa29.61■■■□□ 2.33
ARHGEF40-204ENST00000555038 IQGAP3Q86VI3 1631 aa29.59■■■□□ 2.33
ARHGEF40-204ENST00000555038 MAGI2Q86UL8 1455 aa29.57■■■□□ 2.32
ARHGEF40-204ENST00000555038 ARID4BQ4LE39 1312 aaPredicted RBP29.56■■■□□ 2.32
ARHGEF40-204ENST00000555038 KDM5CP41229 1560 aa29.55■■■□□ 2.32
ARHGEF40-204ENST00000555038 OSCARQ8IYS5 282 aa29.54■■■□□ 2.32
ARHGEF40-204ENST00000555038 USP47Q96K76 1375 aa29.53■■■□□ 2.32
ARHGEF40-204ENST00000555038 C11orf95C9JLR9 678 aaPredicted RBP29.53■■■□□ 2.32
ARHGEF40-204ENST00000555038 KIF7Q2M1P5 1343 aa29.52■■■□□ 2.32
ARHGEF40-204ENST00000555038 RTEL1-TNFRSF6BF6WH68 1400 aa29.51■■■□□ 2.31
ARHGEF40-204ENST00000555038 WDR7Q9Y4E6 1490 aa29.51■■■□□ 2.31
ARHGEF40-204ENST00000555038 ATP10AO60312 1499 aa29.49■■■□□ 2.31
ARHGEF40-204ENST00000555038 CCDC144AA2RUR9 1427 aa29.49■■■□□ 2.31
ARHGEF40-204ENST00000555038 SUPT16HQ9Y5B9 1047 aaKnown RBP29.46■■■□□ 2.31
ARHGEF40-204ENST00000555038 ABCA9Q8IUA7 1624 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms