RNA–Protein interactions for RNA: ENST00000554621.1

CFAP54-206, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 724 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-206ENST00000554621 UBTFP17480 764 aaKnown RBP24.11■■□□□ 1.45
CFAP54-206ENST00000554621 YEATS2Q9ULM3 1422 aa24.1■■□□□ 1.45
CFAP54-206ENST00000554621 MYT1LQ9UL68 1186 aa24.1■■□□□ 1.45
CFAP54-206ENST00000554621 FMN1Q68DA7 1419 aa24.08■■□□□ 1.44
CFAP54-206ENST00000554621 HECW1Q76N89 1606 aa24.07■■□□□ 1.44
CFAP54-206ENST00000554621 CDK13Q14004 1512 aaKnown RBP24.07■■□□□ 1.44
CFAP54-206ENST00000554621 ATP10AO60312 1499 aa24.06■■□□□ 1.44
CFAP54-206ENST00000554621 CERKQ8TCT0 537 aa24.05■■□□□ 1.44
CFAP54-206ENST00000554621 FER1L4A9Z1Z3 1794 aa24.04■■□□□ 1.44
CFAP54-206ENST00000554621 C9orf84Q5VXU9 1444 aa24.03■■□□□ 1.44
CFAP54-206ENST00000554621 DMRT2Q9Y5R5 561 aa24.03■■□□□ 1.44
CFAP54-206ENST00000554621 EHMT2Q96KQ7 1210 aa24.01■■□□□ 1.43
CFAP54-206ENST00000554621 CLIP1P30622 1438 aa24.01■■□□□ 1.43
CFAP54-206ENST00000554621 MYO5CQ9NQX4 1742 aa23.99■■□□□ 1.43
CFAP54-206ENST00000554621 ESF1Q9H501 851 aaKnown RBP23.99■■□□□ 1.43
CFAP54-206ENST00000554621 ZNF518AQ6AHZ1 1483 aa23.98■■□□□ 1.43
CFAP54-206ENST00000554621 KIF14Q15058 1648 aa23.95■■□□□ 1.43
CFAP54-206ENST00000554621 ARHGAP5Q13017 1502 aa23.95■■□□□ 1.43
CFAP54-206ENST00000554621 ARHGEF12Q9NZN5 1544 aa23.95■■□□□ 1.43
CFAP54-206ENST00000554621 SIGLEC1Q9BZZ2 1709 aa23.93■■□□□ 1.42
CFAP54-206ENST00000554621 PREX1Q8TCU6 1659 aa23.92■■□□□ 1.42
CFAP54-206ENST00000554621 CEBPAP49715 358 aaPredicted RBP23.92■■□□□ 1.42
CFAP54-206ENST00000554621 TROQ12816 1431 aaPredicted RBP23.92■■□□□ 1.42
CFAP54-206ENST00000554621 UHRF1BP1Q6BDS2 1440 aa23.92■■□□□ 1.42
CFAP54-206ENST00000554621 AFAP1Q8N556 730 aa23.91■■□□□ 1.42
CFAP54-206ENST00000554621 ARHGAP35Q9NRY4 1499 aa23.87■■□□□ 1.41
CFAP54-206ENST00000554621 KDM5CP41229 1560 aa23.83■■□□□ 1.41
CFAP54-206ENST00000554621 SETD1BQ9UPS6 1966 aaKnown RBP23.81■■□□□ 1.4
CFAP54-206ENST00000554621 MLH3Q9UHC1 1453 aa23.8■■□□□ 1.4
CFAP54-206ENST00000554621 REREQ9P2R6 1566 aa23.78■■□□□ 1.4
CFAP54-206ENST00000554621 CCDC18Q5T9S5 1454 aa23.77■■□□□ 1.4
CFAP54-206ENST00000554621 DIP2CQ9Y2E4 1556 aa23.77■■□□□ 1.4
CFAP54-206ENST00000554621 DISP3Q9P2K9 1392 aa23.75■■□□□ 1.39
CFAP54-206ENST00000554621 CNTLNQ9NXG0 1405 aa23.75■■□□□ 1.39
CFAP54-206ENST00000554621 PTPRTO14522 1441 aa23.74■■□□□ 1.39
CFAP54-206ENST00000554621 TRAPPC8Q9Y2L5 1435 aa23.74■■□□□ 1.39
CFAP54-206ENST00000554621 AGLP35573 1532 aa23.73■■□□□ 1.39
CFAP54-206ENST00000554621 CDC42BPBQ9Y5S2 1711 aa23.71■■□□□ 1.39
CFAP54-206ENST00000554621 ZNF777Q9ULD5 760 aaPredicted RBP23.71■■□□□ 1.39
CFAP54-206ENST00000554621 STRCQ7RTU9 1775 aa23.7■■□□□ 1.39
CFAP54-206ENST00000554621 PREX2Q70Z35 1606 aa23.7■■□□□ 1.39
CFAP54-206ENST00000554621 ABCA6Q8N139 1617 aa23.7■■□□□ 1.39
CFAP54-206ENST00000554621 CASKIN1Q8WXD9 1431 aa23.7■■□□□ 1.38
CFAP54-206ENST00000554621 ABCC1P33527 1531 aa23.69■■□□□ 1.38
CFAP54-206ENST00000554621 C3P01024 1663 aa23.69■■□□□ 1.38
CFAP54-206ENST00000554621 CHIC1Q5VXU3 224 aa23.66■■□□□ 1.38
CFAP54-206ENST00000554621 ITSN2Q9NZM3 1697 aa23.66■■□□□ 1.38
CFAP54-206ENST00000554621 SPAG9O60271 1321 aaKnown RBP23.65■■□□□ 1.38
CFAP54-206ENST00000554621 LRRIQ1Q96JM4 1722 aa23.64■■□□□ 1.38
CFAP54-206ENST00000554621 NPATQ14207 1427 aa23.61■■□□□ 1.37
CFAP54-206ENST00000554621 FYCO1Q9BQS8 1478 aa23.6■■□□□ 1.37
CFAP54-206ENST00000554621 KIDINS220Q9ULH0 1771 aa23.6■■□□□ 1.37
CFAP54-206ENST00000554621 IQSEC2Q5JU85 1478 aa23.59■■□□□ 1.37
CFAP54-206ENST00000554621 NCOA1Q15788 1441 aa23.59■■□□□ 1.37
CFAP54-206ENST00000554621 ZMYM3Q14202 1370 aa23.58■■□□□ 1.37
CFAP54-206ENST00000554621 SOCS7O14512 581 aa23.58■■□□□ 1.37
CFAP54-206ENST00000554621 CFDP1Q9UEE9 299 aaPredicted RBP23.58■■□□□ 1.37
CFAP54-206ENST00000554621 PLEKHH2Q8IVE3 1493 aa23.57■■□□□ 1.36
CFAP54-206ENST00000554621 CDC42BPAQ5VT25 1732 aa23.57■■□□□ 1.36
CFAP54-206ENST00000554621 HNRNPMP52272 730 aaKnown RBP eCLIP23.57■■□□□ 1.36
CFAP54-206ENST00000554621 SAMD9LQ8IVG5 1584 aa23.56■■□□□ 1.36
CFAP54-206ENST00000554621 MROH2AA6NES4 1674 aa23.55■■□□□ 1.36
CFAP54-206ENST00000554621 CAMSAP1Q5T5Y3 1602 aa23.54■■□□□ 1.36
CFAP54-206ENST00000554621 CCNB3Q8WWL7 1395 aa23.53■■□□□ 1.36
CFAP54-206ENST00000554621 PKD2Q13563 968 aa23.53■■□□□ 1.36
CFAP54-206ENST00000554621 SYCP2Q9BX26 1530 aa23.53■■□□□ 1.36
CFAP54-206ENST00000554621 KIAA1107Q9UPP5 1409 aa23.52■■□□□ 1.36
CFAP54-206ENST00000554621 GGT6Q6P531 493 aa23.52■■□□□ 1.36
CFAP54-206ENST00000554621 ILDR2Q71H61 639 aa23.52■■□□□ 1.36
CFAP54-206ENST00000554621 GPATCH8Q9UKJ3 1502 aaKnown RBP23.51■■□□□ 1.35
CFAP54-206ENST00000554621 PPP6R1Q9UPN7 881 aa23.51■■□□□ 1.35
CFAP54-206ENST00000554621 LTBP4Q8N2S1 1624 aa23.51■■□□□ 1.35
CFAP54-206ENST00000554621 SUPT6HQ7KZ85 1726 aaKnown RBP23.5■■□□□ 1.35
CFAP54-206ENST00000554621 SPATA31D1Q6ZQQ2 1576 aa23.5■■□□□ 1.35
CFAP54-206ENST00000554621 NCKAP5LQ9HCH0 1330 aa23.5■■□□□ 1.35
CFAP54-206ENST00000554621 A2MP01023 1474 aa23.49■■□□□ 1.35
CFAP54-206ENST00000554621 ATP7AQ04656 1500 aa23.49■■□□□ 1.35
CFAP54-206ENST00000554621 MTUS2Q5JR59 1369 aa23.49■■□□□ 1.35
CFAP54-206ENST00000554621 UBAP1LF5GYI3 381 aa23.47■■□□□ 1.35
CFAP54-206ENST00000554621 PLA2R1Q13018 1463 aa23.44■■□□□ 1.34
CFAP54-206ENST00000554621 CLTCQ00610 1675 aaKnown RBP23.44■■□□□ 1.34
CFAP54-206ENST00000554621 ZNF335Q9H4Z2 1342 aaPredicted RBP23.42■■□□□ 1.34
CFAP54-206ENST00000554621 PTPRKQ15262 1439 aa23.4■■□□□ 1.34
CFAP54-206ENST00000554621 MYO3AQ8NEV4 1616 aa23.4■■□□□ 1.34
CFAP54-206ENST00000554621 PLXNC1O60486 1568 aa23.4■■□□□ 1.34
CFAP54-206ENST00000554621 INO80Q9ULG1 1556 aaPredicted RBP23.4■■□□□ 1.34
CFAP54-206ENST00000554621 CEP170BQ9Y4F5 1589 aaPredicted RBP23.4■■□□□ 1.34
CFAP54-206ENST00000554621 ZNF142P52746 1687 aaPredicted RBP23.38■■□□□ 1.33
CFAP54-206ENST00000554621 ADGBQ8N7X0 1667 aa23.38■■□□□ 1.33
CFAP54-206ENST00000554621 TCOF1Q13428 1488 aaKnown RBP23.34■■□□□ 1.33
CFAP54-206ENST00000554621 SCAF1Q9H7N4 1312 aaKnown RBP23.33■■□□□ 1.33
CFAP54-206ENST00000554621 RTEL1-TNFRSF6BF6WH68 1400 aa23.33■■□□□ 1.33
CFAP54-206ENST00000554621 A2ML1A8K2U0 1454 aa23.32■■□□□ 1.32
CFAP54-206ENST00000554621 RSPH4AQ5TD94 716 aa23.32■■□□□ 1.32
CFAP54-206ENST00000554621 DHX29Q7Z478 1369 aaKnown RBP23.31■■□□□ 1.32
CFAP54-206ENST00000554621 TOM1O60784 492 aa23.31■■□□□ 1.32
CFAP54-206ENST00000554621 KIF3BO15066 747 aa23.3■■□□□ 1.32
CFAP54-206ENST00000554621 ZNF644Q9H582 1327 aaPredicted RBP23.3■■□□□ 1.32
CFAP54-206ENST00000554621 EHBP1L1Q8N3D4 1523 aa23.29■■□□□ 1.32
CFAP54-206ENST00000554621 WASHC2CQ9Y4E1 1318 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms