RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 DENND4BO75064 1496 aaPredicted RBP12.78□□□□□ -0.36
AL049839.2-201ENST00000553947 HIRIP3Q9BW71 556 aaPredicted RBP12.78□□□□□ -0.36
AL049839.2-201ENST00000553947 TONSLQ96HA7 1378 aa12.77□□□□□ -0.37
AL049839.2-201ENST00000553947 AKNAQ7Z591 1439 aa12.77□□□□□ -0.37
AL049839.2-201ENST00000553947 CDK11AQ9UQ88 783 aaPredicted RBP12.76□□□□□ -0.37
AL049839.2-201ENST00000553947 DAPK1P53355 1430 aa12.76□□□□□ -0.37
AL049839.2-201ENST00000553947 ABCC5O15440 1437 aa12.76□□□□□ -0.37
AL049839.2-201ENST00000553947 CARMIL2Q6F5E8 1435 aa12.76□□□□□ -0.37
AL049839.2-201ENST00000553947 TRIM52Q96A61 297 aa12.76□□□□□ -0.37
AL049839.2-201ENST00000553947 TROQ12816 1431 aaPredicted RBP12.75□□□□□ -0.37
AL049839.2-201ENST00000553947 KIF14Q15058 1648 aa12.74□□□□□ -0.37
AL049839.2-201ENST00000553947 DNMT1P26358 1616 aaKnown RBP12.74□□□□□ -0.37
AL049839.2-201ENST00000553947 KDM5BQ9UGL1 1544 aa12.73□□□□□ -0.37
AL049839.2-201ENST00000553947 DDX10Q13206 875 aaKnown RBP12.73□□□□□ -0.37
AL049839.2-201ENST00000553947 RBM19Q9Y4C8 960 aaKnown RBP12.72□□□□□ -0.37
AL049839.2-201ENST00000553947 MPHOSPH9Q99550 1183 aa12.72□□□□□ -0.37
AL049839.2-201ENST00000553947 FOXD1Q16676 465 aa12.71□□□□□ -0.37
AL049839.2-201ENST00000553947 GPATCH8Q9UKJ3 1502 aaKnown RBP12.71□□□□□ -0.37
AL049839.2-201ENST00000553947 ABCA8O94911 1581 aa12.71□□□□□ -0.38
AL049839.2-201ENST00000553947 ROCK1Q13464 1354 aa12.71□□□□□ -0.38
AL049839.2-201ENST00000553947 CFDP1Q9UEE9 299 aaPredicted RBP12.7□□□□□ -0.38
AL049839.2-201ENST00000553947 KCNH8Q96L42 1107 aa12.7□□□□□ -0.38
AL049839.2-201ENST00000553947 ANO8Q9HCE9 1232 aaPredicted RBP12.7□□□□□ -0.38
AL049839.2-201ENST00000553947 CAMSAP2Q08AD1 1489 aa12.7□□□□□ -0.38
AL049839.2-201ENST00000553947 ADCY10Q96PN6 1610 aa12.69□□□□□ -0.38
AL049839.2-201ENST00000553947 ZNF777Q9ULD5 760 aaPredicted RBP12.69□□□□□ -0.38
AL049839.2-201ENST00000553947 ATP10BO94823 1461 aa12.68□□□□□ -0.38
AL049839.2-201ENST00000553947 ITSN2Q9NZM3 1697 aa12.67□□□□□ -0.38
AL049839.2-201ENST00000553947 PLEKHD1A6NEE1 506 aa12.65□□□□□ -0.38
AL049839.2-201ENST00000553947 CHD1O14646 1710 aa12.65□□□□□ -0.38
AL049839.2-201ENST00000553947 FKBP8Q14318 412 aa12.65□□□□□ -0.38
AL049839.2-201ENST00000553947 ABCC10Q5T3U5 1492 aa12.64□□□□□ -0.39
AL049839.2-201ENST00000553947 NCOA1Q15788 1441 aa12.64□□□□□ -0.39
AL049839.2-201ENST00000553947 PTPRGP23470 1445 aa12.64□□□□□ -0.39
AL049839.2-201ENST00000553947 CDC42BPAQ5VT25 1732 aa12.63□□□□□ -0.39
AL049839.2-201ENST00000553947 ANKRD30BQ9BXX2 1392 aa12.63□□□□□ -0.39
AL049839.2-201ENST00000553947 L3MBTL2Q969R5 705 aa12.62□□□□□ -0.39
AL049839.2-201ENST00000553947 SLC4A1APQ9BWU0 796 aaKnown RBP12.61□□□□□ -0.39
AL049839.2-201ENST00000553947 CROCC2H7BZ55 1655 aa12.61□□□□□ -0.39
AL049839.2-201ENST00000553947 ADGBQ8N7X0 1667 aa12.61□□□□□ -0.39
AL049839.2-201ENST00000553947 ADGRL2O95490 1459 aa12.6□□□□□ -0.39
AL049839.2-201ENST00000553947 PZPP20742 1482 aa12.6□□□□□ -0.39
AL049839.2-201ENST00000553947 NEFLP07196 543 aa12.59□□□□□ -0.39
AL049839.2-201ENST00000553947 RPRD2Q5VT52 1461 aaKnown RBP12.59□□□□□ -0.39
AL049839.2-201ENST00000553947 ERCC6L2Q5T890 1561 aa12.58□□□□□ -0.39
AL049839.2-201ENST00000553947 MSH5O43196 834 aa12.58□□□□□ -0.4
AL049839.2-201ENST00000553947 HSPA5P11021 654 aaKnown RBP12.58□□□□□ -0.4
AL049839.2-201ENST00000553947 DEKP35659 375 aaKnown RBP12.58□□□□□ -0.4
AL049839.2-201ENST00000553947 ANKRD30AQ9BXX3 1397 aa12.57□□□□□ -0.4
AL049839.2-201ENST00000553947 NBPF8Q3BBV2 869 aa12.57□□□□□ -0.4
AL049839.2-201ENST00000553947 SHROOM2Q13796 1616 aa12.57□□□□□ -0.4
AL049839.2-201ENST00000553947 TEX14Q8IWB6 1497 aa12.56□□□□□ -0.4
AL049839.2-201ENST00000553947 HNRNPMP52272 730 aaKnown RBP eCLIP12.56□□□□□ -0.4
AL049839.2-201ENST00000553947 ANKRD50Q9ULJ7 1429 aa12.55□□□□□ -0.4
AL049839.2-201ENST00000553947 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
AL049839.2-201ENST00000553947 WASHC2AQ641Q2 1341 aa12.54□□□□□ -0.4
AL049839.2-201ENST00000553947 ANP32CO43423 234 aa12.53□□□□□ -0.4
AL049839.2-201ENST00000553947 MYT1LQ9UL68 1186 aa12.53□□□□□ -0.4
AL049839.2-201ENST00000553947 SHANK2Q9UPX8 1470 aa12.53□□□□□ -0.4
AL049839.2-201ENST00000553947 MBD5Q9P267 1494 aa12.53□□□□□ -0.4
AL049839.2-201ENST00000553947 PKD2Q13563 968 aa12.53□□□□□ -0.4
AL049839.2-201ENST00000553947 CCDC136Q96JN2 1154 aa12.53□□□□□ -0.4
AL049839.2-201ENST00000553947 CDC42BPBQ9Y5S2 1711 aa12.53□□□□□ -0.4
AL049839.2-201ENST00000553947 EIF4G2P78344 907 aaKnown RBP eCLIP12.52□□□□□ -0.4
AL049839.2-201ENST00000553947 SALL2Q9Y467 1007 aaPredicted RBP12.52□□□□□ -0.41
AL049839.2-201ENST00000553947 KIAA1107Q9UPP5 1409 aa12.52□□□□□ -0.41
AL049839.2-201ENST00000553947 SAMD9LQ8IVG5 1584 aa12.52□□□□□ -0.41
AL049839.2-201ENST00000553947 C11orf95C9JLR9 678 aaPredicted RBP12.51□□□□□ -0.41
AL049839.2-201ENST00000553947 TSPY4P0CV99 314 aa12.51□□□□□ -0.41
AL049839.2-201ENST00000553947 TSPY10P0CW01 314 aa12.51□□□□□ -0.41
AL049839.2-201ENST00000553947 PREX2Q70Z35 1606 aa12.5□□□□□ -0.41
AL049839.2-201ENST00000553947 CCER2I3L3R5 266 aa12.5□□□□□ -0.41
AL049839.2-201ENST00000553947 ARHGEF5Q12774 1597 aa12.5□□□□□ -0.41
AL049839.2-201ENST00000553947 TTC37Q6PGP7 1564 aa12.5□□□□□ -0.41
AL049839.2-201ENST00000553947 NUP155O75694 1391 aa12.5□□□□□ -0.41
AL049839.2-201ENST00000553947 PHF23Q9BUL5 403 aaPredicted RBP12.49□□□□□ -0.41
AL049839.2-201ENST00000553947 KIF15Q9NS87 1388 aa12.49□□□□□ -0.41
AL049839.2-201ENST00000553947 ABCC2Q92887 1545 aa12.49□□□□□ -0.41
AL049839.2-201ENST00000553947 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.48□□□□□ -0.41
AL049839.2-201ENST00000553947 CCDC141Q6ZP82 1450 aa12.47□□□□□ -0.41
AL049839.2-201ENST00000553947 CLASP1Q7Z460 1538 aa12.46□□□□□ -0.41
AL049839.2-201ENST00000553947 SYCP2Q9BX26 1530 aa12.46□□□□□ -0.42
AL049839.2-201ENST00000553947 SPATA31E1Q6ZUB1 1445 aa12.45□□□□□ -0.42
AL049839.2-201ENST00000553947 ARHGAP5Q13017 1502 aa12.45□□□□□ -0.42
AL049839.2-201ENST00000553947 CCDC7Q96M83 1385 aa12.44□□□□□ -0.42
AL049839.2-201ENST00000553947 KDM5DQ9BY66 1539 aa12.44□□□□□ -0.42
AL049839.2-201ENST00000553947 ZNF326Q5BKZ1 582 aaKnown RBP12.43□□□□□ -0.42
AL049839.2-201ENST00000553947 NBR1Q14596 966 aa12.42□□□□□ -0.42
AL049839.2-201ENST00000553947 CNTLNQ9NXG0 1405 aa12.42□□□□□ -0.42
AL049839.2-201ENST00000553947 ZCCHC11Q5TAX3 1644 aaKnown RBP12.42□□□□□ -0.42
AL049839.2-201ENST00000553947 RSPH4AQ5TD94 716 aa12.41□□□□□ -0.42
AL049839.2-201ENST00000553947 FANCIQ9NVI1 1328 aa12.41□□□□□ -0.42
AL049839.2-201ENST00000553947 ARHGEF12Q9NZN5 1544 aa12.41□□□□□ -0.42
AL049839.2-201ENST00000553947 MYO5CQ9NQX4 1742 aa12.41□□□□□ -0.42
AL049839.2-201ENST00000553947 KIF7Q2M1P5 1343 aa12.41□□□□□ -0.42
AL049839.2-201ENST00000553947 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.41□□□□□ -0.42
AL049839.2-201ENST00000553947 RTN4Q9NQC3 1192 aaKnown RBP12.39□□□□□ -0.43
AL049839.2-201ENST00000553947 FAM135AQ9P2D6 1515 aa12.39□□□□□ -0.43
AL049839.2-201ENST00000553947 MAST1Q9Y2H9 1570 aa12.39□□□□□ -0.43
AL049839.2-201ENST00000553947 CCDC184Q52MB2 194 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms