RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.8■□□□□ 0.28
SPTB-206ENST00000553938 LAMC3Q9Y6N6 1575 aa16.79■□□□□ 0.28
SPTB-206ENST00000553938 ABCA5Q8WWZ7 1642 aa16.78■□□□□ 0.28
SPTB-206ENST00000553938 ZNF326Q5BKZ1 582 aaKnown RBP16.78■□□□□ 0.28
SPTB-206ENST00000553938 UGGT2Q9NYU1 1516 aa16.78■□□□□ 0.28
SPTB-206ENST00000553938 SUPT6HQ7KZ85 1726 aaKnown RBP16.78■□□□□ 0.28
SPTB-206ENST00000553938 B4GALNT3Q6L9W6 998 aa16.77■□□□□ 0.28
SPTB-206ENST00000553938 THOC2Q8NI27 1593 aaKnown RBP16.76■□□□□ 0.27
SPTB-206ENST00000553938 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
SPTB-206ENST00000553938 UBE2Q2Q8WVN8 375 aa16.75■□□□□ 0.27
SPTB-206ENST00000553938 PDS5BQ9NTI5 1447 aa16.74■□□□□ 0.27
SPTB-206ENST00000553938 AEBP2Q6ZN18 517 aaPredicted RBP16.74■□□□□ 0.27
SPTB-206ENST00000553938 EIF4G2P78344 907 aaKnown RBP eCLIP16.73■□□□□ 0.27
SPTB-206ENST00000553938 MRS2Q9HD23 443 aa16.72■□□□□ 0.27
SPTB-206ENST00000553938 EHBP1L1Q8N3D4 1523 aa16.72■□□□□ 0.27
SPTB-206ENST00000553938 PRKRIP1Q9H875 184 aaPredicted RBP16.71■□□□□ 0.27
SPTB-206ENST00000553938 EPRSP07814 1512 aaKnown RBP16.71■□□□□ 0.26
SPTB-206ENST00000553938 ARHGEF11O15085 1522 aa16.7■□□□□ 0.26
SPTB-206ENST00000553938 KIF7Q2M1P5 1343 aa16.69■□□□□ 0.26
SPTB-206ENST00000553938 ZNF777Q9ULD5 760 aaPredicted RBP16.68■□□□□ 0.26
SPTB-206ENST00000553938 CCDC7Q96M83 1385 aa16.68■□□□□ 0.26
SPTB-206ENST00000553938 SLC4A1APQ9BWU0 796 aaKnown RBP16.67■□□□□ 0.26
SPTB-206ENST00000553938 CNTLNQ9NXG0 1405 aa16.67■□□□□ 0.26
SPTB-206ENST00000553938 ZNF608Q9ULD9 1512 aaPredicted RBP16.66■□□□□ 0.26
SPTB-206ENST00000553938 TARBP1Q13395 1621 aaKnown RBP16.65■□□□□ 0.26
SPTB-206ENST00000553938 GCC2Q8IWJ2 1684 aa16.64■□□□□ 0.25
SPTB-206ENST00000553938 AKNAQ7Z591 1439 aa16.64■□□□□ 0.25
SPTB-206ENST00000553938 HECW1Q76N89 1606 aa16.64■□□□□ 0.25
SPTB-206ENST00000553938 NCOA1Q15788 1441 aa16.62■□□□□ 0.25
SPTB-206ENST00000553938 ANKRD30BQ9BXX2 1392 aa16.62■□□□□ 0.25
SPTB-206ENST00000553938 TCOF1Q13428 1488 aaKnown RBP16.62■□□□□ 0.25
SPTB-206ENST00000553938 ARXQ96QS3 562 aa16.61■□□□□ 0.25
SPTB-206ENST00000553938 ABCC5O15440 1437 aa16.61■□□□□ 0.25
SPTB-206ENST00000553938 TEX14Q8IWB6 1497 aa16.6■□□□□ 0.25
SPTB-206ENST00000553938 PODXL2Q9NZ53 605 aa16.6■□□□□ 0.25
SPTB-206ENST00000553938 DAPK1P53355 1430 aa16.6■□□□□ 0.25
SPTB-206ENST00000553938 IQGAP2Q13576 1575 aa16.6■□□□□ 0.25
SPTB-206ENST00000553938 WDR62O43379 1518 aa16.59■□□□□ 0.25
SPTB-206ENST00000553938 PRG4Q92954 1404 aaPredicted RBP16.59■□□□□ 0.25
SPTB-206ENST00000553938 NBR1Q14596 966 aa16.58■□□□□ 0.25
SPTB-206ENST00000553938 CDK11AQ9UQ88 783 aaPredicted RBP16.58■□□□□ 0.25
SPTB-206ENST00000553938 PBRM1Q86U86 1689 aa16.58■□□□□ 0.24
SPTB-206ENST00000553938 IL27Q8NEV9 243 aa16.58■□□□□ 0.24
SPTB-206ENST00000553938 FBLN2P98095 1184 aa16.56■□□□□ 0.24
SPTB-206ENST00000553938 BCORL1Q5H9F3 1711 aa16.56■□□□□ 0.24
SPTB-206ENST00000553938 KDM2AQ9Y2K7 1162 aa16.55■□□□□ 0.24
SPTB-206ENST00000553938 RPRD2Q5VT52 1461 aaKnown RBP16.55■□□□□ 0.24
SPTB-206ENST00000553938 SPATA31E1Q6ZUB1 1445 aa16.55■□□□□ 0.24
SPTB-206ENST00000553938 NUP153P49790 1475 aaKnown RBP16.54■□□□□ 0.24
SPTB-206ENST00000553938 PKD2Q13563 968 aa16.53■□□□□ 0.24
SPTB-206ENST00000553938 ADAMTS12P58397 1594 aa16.52■□□□□ 0.24
SPTB-206ENST00000553938 PPP4R2Q9NY27 417 aa16.52■□□□□ 0.23
SPTB-206ENST00000553938 PLB1Q6P1J6 1458 aa16.52■□□□□ 0.23
SPTB-206ENST00000553938 DISP1Q96F81 1524 aa16.52■□□□□ 0.23
SPTB-206ENST00000553938 PZPP20742 1482 aa16.51■□□□□ 0.23
SPTB-206ENST00000553938 PAK3O75914 559 aaPredicted RBP16.51■□□□□ 0.23
SPTB-206ENST00000553938 DHX29Q7Z478 1369 aaKnown RBP16.51■□□□□ 0.23
SPTB-206ENST00000553938 ZBED9Q6R2W3 1325 aa16.5■□□□□ 0.23
SPTB-206ENST00000553938 CFDP1Q9UEE9 299 aaPredicted RBP16.49■□□□□ 0.23
SPTB-206ENST00000553938 PKNOX2Q96KN3 472 aa16.49■□□□□ 0.23
SPTB-206ENST00000553938 KIF14Q15058 1648 aa16.49■□□□□ 0.23
SPTB-206ENST00000553938 SKAP1Q86WV1 359 aa16.48■□□□□ 0.23
SPTB-206ENST00000553938 USP47Q96K76 1375 aa16.48■□□□□ 0.23
SPTB-206ENST00000553938 MIA2Q96PC5 1412 aa16.48■□□□□ 0.23
SPTB-206ENST00000553938 KCNA4P22459 653 aa16.47■□□□□ 0.23
SPTB-206ENST00000553938 DNMT1P26358 1616 aaKnown RBP16.46■□□□□ 0.23
SPTB-206ENST00000553938 CAMSAP2Q08AD1 1489 aa16.44■□□□□ 0.22
SPTB-206ENST00000553938 ERICH6BQ5W0A0 696 aa16.44■□□□□ 0.22
SPTB-206ENST00000553938 FANCIQ9NVI1 1328 aa16.44■□□□□ 0.22
SPTB-206ENST00000553938 KIAA0556O60303 1618 aa16.43■□□□□ 0.22
SPTB-206ENST00000553938 MYT1LQ9UL68 1186 aa16.43■□□□□ 0.22
SPTB-206ENST00000553938 ST20-MTHFSA0A0A6YYL1 179 aa16.42■□□□□ 0.22
SPTB-206ENST00000553938 HNRNPMP52272 730 aaKnown RBP eCLIP16.4■□□□□ 0.22
SPTB-206ENST00000553938 GPATCH8Q9UKJ3 1502 aaKnown RBP16.39■□□□□ 0.21
SPTB-206ENST00000553938 CARD11Q9BXL7 1154 aa16.39■□□□□ 0.21
SPTB-206ENST00000553938 RAPGEF6Q8TEU7 1601 aa16.39■□□□□ 0.21
SPTB-206ENST00000553938 ROCK1Q13464 1354 aa16.39■□□□□ 0.21
SPTB-206ENST00000553938 RGL3Q3MIN7 710 aa16.39■□□□□ 0.21
SPTB-206ENST00000553938 DCAF11Q8TEB1 546 aa16.38■□□□□ 0.21
SPTB-206ENST00000553938 AMER1Q5JTC6 1135 aaPredicted RBP16.38■□□□□ 0.21
SPTB-206ENST00000553938 MBD5Q9P267 1494 aa16.37■□□□□ 0.21
SPTB-206ENST00000553938 PNISRQ8TF01 805 aaKnown RBP16.37■□□□□ 0.21
SPTB-206ENST00000553938 NUP155O75694 1391 aa16.37■□□□□ 0.21
SPTB-206ENST00000553938 NBPF1Q3BBV0 1214 aa16.35■□□□□ 0.21
SPTB-206ENST00000553938 NUDCQ9Y266 331 aa16.35■□□□□ 0.21
SPTB-206ENST00000553938 TMC1Q8TDI8 760 aa16.35■□□□□ 0.21
SPTB-206ENST00000553938 KIAA1107Q9UPP5 1409 aa16.35■□□□□ 0.21
SPTB-206ENST00000553938 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
SPTB-206ENST00000553938 MRC2Q9UBG0 1479 aa16.34■□□□□ 0.21
SPTB-206ENST00000553938 CDCA7LQ96GN5 454 aa16.34■□□□□ 0.21
SPTB-206ENST00000553938 KDM5CP41229 1560 aa16.34■□□□□ 0.21
SPTB-206ENST00000553938 GRIN2AQ12879 1464 aa16.33■□□□□ 0.21
SPTB-206ENST00000553938 KIAA0586Q9BVV6 1533 aa16.33■□□□□ 0.21
SPTB-206ENST00000553938 PLIN1O60240 522 aa16.33■□□□□ 0.2
SPTB-206ENST00000553938 TROQ12816 1431 aaPredicted RBP16.33■□□□□ 0.2
SPTB-206ENST00000553938 ANKRD50Q9ULJ7 1429 aa16.33■□□□□ 0.2
SPTB-206ENST00000553938 POLR1AO95602 1720 aaPredicted RBP16.32■□□□□ 0.2
SPTB-206ENST00000553938 EXOC6Q8TAG9 804 aa16.32■□□□□ 0.2
SPTB-206ENST00000553938 NPM2Q86SE8 214 aaKnown RBP16.32■□□□□ 0.2
SPTB-206ENST00000553938 EIF4G3O43432 1585 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms