RNA–Protein interactions for RNA: ENST00000553691.5

VIPAS39-205, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-205ENST00000553691 ECM2O94769 699 aaPredicted RBP11.53□□□□□ -0.56
VIPAS39-205ENST00000553691 PSEN1P49768 467 aa11.52□□□□□ -0.57
VIPAS39-205ENST00000553691 RNF25Q96BH1 459 aaPredicted RBP11.52□□□□□ -0.57
VIPAS39-205ENST00000553691 METRNQ9UJH8 293 aa11.52□□□□□ -0.57
VIPAS39-205ENST00000553691 SOGA1O94964 1423 aa11.52□□□□□ -0.57
VIPAS39-205ENST00000553691 CLASP1Q7Z460 1538 aa11.51□□□□□ -0.57
VIPAS39-205ENST00000553691 CHMP7Q8WUX9 453 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-205ENST00000553691 SLC39A7Q92504 469 aa11.49□□□□□ -0.57
VIPAS39-205ENST00000553691 ERCC6L2Q5T890 1561 aa11.49□□□□□ -0.57
VIPAS39-205ENST00000553691 BIVM-ERCC5R4GMW8 1640 aa11.49□□□□□ -0.57
VIPAS39-205ENST00000553691 PDAP1Q13442 181 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-205ENST00000553691 SYNJ1O43426 1573 aa11.48□□□□□ -0.57
VIPAS39-205ENST00000553691 TOP2BQ02880 1626 aa11.47□□□□□ -0.57
VIPAS39-205ENST00000553691 TDRD9Q8NDG6 1382 aaKnown RBP11.47□□□□□ -0.57
VIPAS39-205ENST00000553691 LHX8Q68G74 356 aa11.47□□□□□ -0.57
VIPAS39-205ENST00000553691 ABCA5Q8WWZ7 1642 aa11.46□□□□□ -0.57
VIPAS39-205ENST00000553691 RIOK3O14730 519 aaKnown RBP11.46□□□□□ -0.57
VIPAS39-205ENST00000553691 C7P10643 843 aa11.46□□□□□ -0.57
VIPAS39-205ENST00000553691 ABCA10Q8WWZ4 1543 aa11.45□□□□□ -0.58
VIPAS39-205ENST00000553691 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
VIPAS39-205ENST00000553691 RGL2O15211 777 aa11.45□□□□□ -0.58
VIPAS39-205ENST00000553691 KDM4FA0A1W2PPD8 638 aa11.44□□□□□ -0.58
VIPAS39-205ENST00000553691 SNAPC4Q5SXM2 1469 aa11.44□□□□□ -0.58
VIPAS39-205ENST00000553691 PBRM1Q86U86 1689 aa11.43□□□□□ -0.58
VIPAS39-205ENST00000553691 POTEFA5A3E0 1075 aa11.43□□□□□ -0.58
VIPAS39-205ENST00000553691 COLQQ9Y215 455 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-205ENST00000553691 WRNQ14191 1432 aaPredicted RBP eCLIP11.43□□□□□ -0.58
VIPAS39-205ENST00000553691 HECW2Q9P2P5 1572 aa11.42□□□□□ -0.58
VIPAS39-205ENST00000553691 SEC24BO95487 1268 aa11.42□□□□□ -0.58
VIPAS39-205ENST00000553691 GRIN2BQ13224 1484 aa11.41□□□□□ -0.58
VIPAS39-205ENST00000553691 GAPVD1Q14C86 1478 aa11.41□□□□□ -0.58
VIPAS39-205ENST00000553691 MAGI1Q96QZ7 1491 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-205ENST00000553691 GOLGA2Q08379 1002 aa11.41□□□□□ -0.58
VIPAS39-205ENST00000553691 CABP2Q9NPB3 220 aa11.41□□□□□ -0.58
VIPAS39-205ENST00000553691 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.4□□□□□ -0.58
VIPAS39-205ENST00000553691 ZFP91Q96JP5 570 aaPredicted RBP11.4□□□□□ -0.58
VIPAS39-205ENST00000553691 VGFO15240 615 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-205ENST00000553691 SYNJ2O15056 1496 aa11.37□□□□□ -0.59
VIPAS39-205ENST00000553691 LMTK3Q96Q04 1460 aa11.37□□□□□ -0.59
VIPAS39-205ENST00000553691 KDM6BO15054 1643 aa11.36□□□□□ -0.59
VIPAS39-205ENST00000553691 MKRN3Q13064 507 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-205ENST00000553691 IER5LQ5T953 404 aa11.36□□□□□ -0.59
VIPAS39-205ENST00000553691 POTEJP0CG39 1038 aa11.35□□□□□ -0.59
VIPAS39-205ENST00000553691 TSPOAP1O95153 1857 aa11.34□□□□□ -0.59
VIPAS39-205ENST00000553691 ADAMTS12P58397 1594 aa11.34□□□□□ -0.59
VIPAS39-205ENST00000553691 IRX5P78411 483 aaPredicted RBP11.34□□□□□ -0.59
VIPAS39-205ENST00000553691 PLCG2P16885 1265 aa11.33□□□□□ -0.6
VIPAS39-205ENST00000553691 FBXO41Q8TF61 875 aa11.33□□□□□ -0.6
VIPAS39-205ENST00000553691 EFCAB3Q8N7B9 438 aa11.32□□□□□ -0.6
VIPAS39-205ENST00000553691 BCL11BQ9C0K0 894 aaPredicted RBP11.31□□□□□ -0.6
VIPAS39-205ENST00000553691 ERICH3Q5RHP9 1530 aa11.3□□□□□ -0.6
VIPAS39-205ENST00000553691 STK25O00506 426 aa11.3□□□□□ -0.6
VIPAS39-205ENST00000553691 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.3□□□□□ -0.6
VIPAS39-205ENST00000553691 STK24Q9Y6E0 443 aa11.3□□□□□ -0.6
VIPAS39-205ENST00000553691 OCEL1Q9H607 264 aa11.29□□□□□ -0.6
VIPAS39-205ENST00000553691 GRIN2AQ12879 1464 aa11.29□□□□□ -0.6
VIPAS39-205ENST00000553691 OTUD5Q96G74 571 aa11.28□□□□□ -0.6
VIPAS39-205ENST00000553691 CEP170Q5SW79 1584 aa11.28□□□□□ -0.6
VIPAS39-205ENST00000553691 NUP160Q12769 1436 aa11.27□□□□□ -0.6
VIPAS39-205ENST00000553691 TAOK2Q9UL54 1235 aa11.27□□□□□ -0.61
VIPAS39-205ENST00000553691 FHAD1B1AJZ9 1412 aa11.26□□□□□ -0.61
VIPAS39-205ENST00000553691 ADGRL1O94910 1474 aa11.25□□□□□ -0.61
VIPAS39-205ENST00000553691 FAM69CQ0P6D2 419 aa11.25□□□□□ -0.61
VIPAS39-205ENST00000553691 DPY19L2Q6NUT2 758 aa11.25□□□□□ -0.61
VIPAS39-205ENST00000553691 PDCD7Q8N8D1 485 aaKnown RBP11.25□□□□□ -0.61
VIPAS39-205ENST00000553691 SHROOM2Q13796 1616 aa11.24□□□□□ -0.61
VIPAS39-205ENST00000553691 DIP2BQ9P265 1576 aa11.23□□□□□ -0.61
VIPAS39-205ENST00000553691 SOCS7O14512 581 aa11.22□□□□□ -0.61
VIPAS39-205ENST00000553691 PLSCR2Q9NRY7 297 aa11.22□□□□□ -0.61
VIPAS39-205ENST00000553691 RTN4Q9NQC3 1192 aaKnown RBP11.21□□□□□ -0.61
VIPAS39-205ENST00000553691 PHF8Q9UPP1 1060 aa11.21□□□□□ -0.61
VIPAS39-205ENST00000553691 IGF1RP08069 1367 aa11.19□□□□□ -0.62
VIPAS39-205ENST00000553691 CHGAP10645 457 aaKnown RBP11.19□□□□□ -0.62
VIPAS39-205ENST00000553691 SCUBE2Q9NQ36 999 aa11.19□□□□□ -0.62
VIPAS39-205ENST00000553691 RUSC2Q8N2Y8 1516 aa11.19□□□□□ -0.62
VIPAS39-205ENST00000553691 ABCC10Q5T3U5 1492 aa11.18□□□□□ -0.62
VIPAS39-205ENST00000553691 KIF27Q86VH2 1401 aa11.18□□□□□ -0.62
VIPAS39-205ENST00000553691 CUL7Q14999 1698 aa11.17□□□□□ -0.62
VIPAS39-205ENST00000553691 MAMSTRQ6ZN01 415 aa11.17□□□□□ -0.62
VIPAS39-205ENST00000553691 ILDR2Q71H61 639 aa11.17□□□□□ -0.62
VIPAS39-205ENST00000553691 SOX12O15370 315 aa11.15□□□□□ -0.62
VIPAS39-205ENST00000553691 AMER1Q5JTC6 1135 aaPredicted RBP11.15□□□□□ -0.62
VIPAS39-205ENST00000553691 MS4A4AQ96JQ5 239 aa11.15□□□□□ -0.62
VIPAS39-205ENST00000553691 MFRPQ9BY79 579 aa11.13□□□□□ -0.63
VIPAS39-205ENST00000553691 HS6ST3Q8IZP7 471 aa11.12□□□□□ -0.63
VIPAS39-205ENST00000553691 L3MBTL3Q96JM7 780 aaPredicted RBP11.12□□□□□ -0.63
VIPAS39-205ENST00000553691 MAPKBP1O60336 1514 aa11.12□□□□□ -0.63
VIPAS39-205ENST00000553691 DISP3Q9P2K9 1392 aa11.11□□□□□ -0.63
VIPAS39-205ENST00000553691 FBXO22Q8NEZ5 403 aa11.1□□□□□ -0.63
VIPAS39-205ENST00000553691 CARMIL1Q5VZK9 1371 aa11.09□□□□□ -0.63
VIPAS39-205ENST00000553691 G3V3G9 751 aa11.09□□□□□ -0.63
VIPAS39-205ENST00000553691 NLRP6P59044 892 aa11.09□□□□□ -0.63
VIPAS39-205ENST00000553691 SLAIN1Q8ND83 568 aa11.09□□□□□ -0.63
VIPAS39-205ENST00000553691 BOLA1Q9Y3E2 137 aa11.09□□□□□ -0.63
VIPAS39-205ENST00000553691 KIAA0586Q9BVV6 1533 aa11.09□□□□□ -0.63
VIPAS39-205ENST00000553691 PRG4Q92954 1404 aaPredicted RBP11.09□□□□□ -0.63
VIPAS39-205ENST00000553691 C3orf67Q6ZVT6 689 aa11.08□□□□□ -0.64
VIPAS39-205ENST00000553691 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
VIPAS39-205ENST00000553691 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.07□□□□□ -0.64
VIPAS39-205ENST00000553691 PPRC1Q5VV67 1664 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms