RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 PREX1Q8TCU6 1659 aa16.54■□□□□ 0.24
CHD8-205ENST00000553651 PLEKHD1A6NEE1 506 aa16.53■□□□□ 0.24
CHD8-205ENST00000553651 MLECQ14165 292 aa16.53■□□□□ 0.24
CHD8-205ENST00000553651 SCAPERQ9BY12 1400 aa16.5■□□□□ 0.23
CHD8-205ENST00000553651 ATP10AO60312 1499 aa16.49■□□□□ 0.23
CHD8-205ENST00000553651 CEBPAP49715 358 aaPredicted RBP16.49■□□□□ 0.23
CHD8-205ENST00000553651 PLCH2O75038 1416 aa16.48■□□□□ 0.23
CHD8-205ENST00000553651 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
CHD8-205ENST00000553651 C9orf84Q5VXU9 1444 aa16.47■□□□□ 0.23
CHD8-205ENST00000553651 SPATA31D1Q6ZQQ2 1576 aa16.47■□□□□ 0.23
CHD8-205ENST00000553651 CDK13Q14004 1512 aaKnown RBP16.45■□□□□ 0.22
CHD8-205ENST00000553651 DMRT2Q9Y5R5 561 aa16.44■□□□□ 0.22
CHD8-205ENST00000553651 LTBP4Q8N2S1 1624 aa16.44■□□□□ 0.22
CHD8-205ENST00000553651 SETD1BQ9UPS6 1966 aaKnown RBP16.44■□□□□ 0.22
CHD8-205ENST00000553651 PTPRTO14522 1441 aa16.43■□□□□ 0.22
CHD8-205ENST00000553651 UHRF1BP1Q6BDS2 1440 aa16.42■□□□□ 0.22
CHD8-205ENST00000553651 KDM5CP41229 1560 aa16.4■□□□□ 0.22
CHD8-205ENST00000553651 RANGAP1P46060 587 aaPredicted RBP16.4■□□□□ 0.22
CHD8-205ENST00000553651 DIP2CQ9Y2E4 1556 aa16.38■□□□□ 0.21
CHD8-205ENST00000553651 C3P01024 1663 aa16.37■□□□□ 0.21
CHD8-205ENST00000553651 MYO5CQ9NQX4 1742 aa16.37■□□□□ 0.21
CHD8-205ENST00000553651 REREQ9P2R6 1566 aa16.37■□□□□ 0.21
CHD8-205ENST00000553651 IQSEC2Q5JU85 1478 aa16.36■□□□□ 0.21
CHD8-205ENST00000553651 ZNF518AQ6AHZ1 1483 aa16.36■□□□□ 0.21
CHD8-205ENST00000553651 EFCAB2Q5VUJ9 269 aa16.36■□□□□ 0.21
CHD8-205ENST00000553651 AFAP1Q8N556 730 aa16.35■□□□□ 0.21
CHD8-205ENST00000553651 KIF14Q15058 1648 aa16.34■□□□□ 0.21
CHD8-205ENST00000553651 NCOA1Q15788 1441 aa16.33■□□□□ 0.2
CHD8-205ENST00000553651 ABCA6Q8N139 1617 aa16.33■□□□□ 0.2
CHD8-205ENST00000553651 AGLP35573 1532 aa16.32■□□□□ 0.2
CHD8-205ENST00000553651 EEA1Q15075 1411 aa16.31■□□□□ 0.2
CHD8-205ENST00000553651 TRAPPC8Q9Y2L5 1435 aa16.31■□□□□ 0.2
CHD8-205ENST00000553651 MLH3Q9UHC1 1453 aa16.3■□□□□ 0.2
CHD8-205ENST00000553651 ARHGAP5Q13017 1502 aa16.28■□□□□ 0.2
CHD8-205ENST00000553651 TROQ12816 1431 aaPredicted RBP16.27■□□□□ 0.19
CHD8-205ENST00000553651 CDC42BPBQ9Y5S2 1711 aa16.26■□□□□ 0.19
CHD8-205ENST00000553651 CAMSAP1Q5T5Y3 1602 aa16.24■□□□□ 0.19
CHD8-205ENST00000553651 KIDINS220Q9ULH0 1771 aa16.23■□□□□ 0.19
CHD8-205ENST00000553651 LRRIQ1Q96JM4 1722 aa16.23■□□□□ 0.19
CHD8-205ENST00000553651 FMN1Q68DA7 1419 aa16.23■□□□□ 0.19
CHD8-205ENST00000553651 ABCC1P33527 1531 aa16.23■□□□□ 0.19
CHD8-205ENST00000553651 ARHGAP35Q9NRY4 1499 aa16.22■□□□□ 0.19
CHD8-205ENST00000553651 NPATQ14207 1427 aa16.22■□□□□ 0.19
CHD8-205ENST00000553651 CNTLNQ9NXG0 1405 aa16.22■□□□□ 0.19
CHD8-205ENST00000553651 ZNF335Q9H4Z2 1342 aaPredicted RBP16.21■□□□□ 0.19
CHD8-205ENST00000553651 CDK11AQ9UQ88 783 aaPredicted RBP16.21■□□□□ 0.19
CHD8-205ENST00000553651 MROH2AA6NES4 1674 aa16.21■□□□□ 0.18
CHD8-205ENST00000553651 ITSN2Q9NZM3 1697 aa16.21■□□□□ 0.18
CHD8-205ENST00000553651 PREX2Q70Z35 1606 aa16.19■□□□□ 0.18
CHD8-205ENST00000553651 NCKAP5LQ9HCH0 1330 aa16.19■□□□□ 0.18
CHD8-205ENST00000553651 MYT1LQ9UL68 1186 aa16.18■□□□□ 0.18
CHD8-205ENST00000553651 ATP1B4Q9UN42 357 aaPredicted RBP16.18■□□□□ 0.18
CHD8-205ENST00000553651 UBAP1LF5GYI3 381 aa16.17■□□□□ 0.18
CHD8-205ENST00000553651 CLIP1P30622 1438 aa16.17■□□□□ 0.18
CHD8-205ENST00000553651 ZNF142P52746 1687 aaPredicted RBP16.17■□□□□ 0.18
CHD8-205ENST00000553651 TCOF1Q13428 1488 aaKnown RBP16.16■□□□□ 0.18
CHD8-205ENST00000553651 ZMYM3Q14202 1370 aa16.16■□□□□ 0.18
CHD8-205ENST00000553651 ESF1Q9H501 851 aaKnown RBP16.16■□□□□ 0.18
CHD8-205ENST00000553651 PLA2R1Q13018 1463 aa16.16■□□□□ 0.18
CHD8-205ENST00000553651 SAMD9LQ8IVG5 1584 aa16.14■□□□□ 0.17
CHD8-205ENST00000553651 MYO3AQ8NEV4 1616 aa16.13■□□□□ 0.17
CHD8-205ENST00000553651 CDC42BPAQ5VT25 1732 aa16.12■□□□□ 0.17
CHD8-205ENST00000553651 PTPRKQ15262 1439 aa16.11■□□□□ 0.17
CHD8-205ENST00000553651 PKD2Q13563 968 aa16.11■□□□□ 0.17
CHD8-205ENST00000553651 MED1Q15648 1581 aaPredicted RBP16.11■□□□□ 0.17
CHD8-205ENST00000553651 CEP170BQ9Y4F5 1589 aaPredicted RBP16.11■□□□□ 0.17
CHD8-205ENST00000553651 PLXNC1O60486 1568 aa16.1■□□□□ 0.17
CHD8-205ENST00000553651 CLTCQ00610 1675 aaKnown RBP16.09■□□□□ 0.17
CHD8-205ENST00000553651 SUPT6HQ7KZ85 1726 aaKnown RBP16.08■□□□□ 0.17
CHD8-205ENST00000553651 HSPA1LP34931 641 aa16.08■□□□□ 0.16
CHD8-205ENST00000553651 SYCP2Q9BX26 1530 aa16.06■□□□□ 0.16
CHD8-205ENST00000553651 INO80Q9ULG1 1556 aaPredicted RBP16.05■□□□□ 0.16
CHD8-205ENST00000553651 CASKIN1Q8WXD9 1431 aa16.05■□□□□ 0.16
CHD8-205ENST00000553651 UBTFP17480 764 aaKnown RBP16.05■□□□□ 0.16
CHD8-205ENST00000553651 ATP7AQ04656 1500 aa16.04■□□□□ 0.16
CHD8-205ENST00000553651 CCDC18Q5T9S5 1454 aa16.04■□□□□ 0.16
CHD8-205ENST00000553651 EHMT2Q96KQ7 1210 aa16.04■□□□□ 0.16
CHD8-205ENST00000553651 PPP6R1Q9UPN7 881 aa16.04■□□□□ 0.16
CHD8-205ENST00000553651 SPAG9O60271 1321 aaKnown RBP16.03■□□□□ 0.16
CHD8-205ENST00000553651 DNMT1P26358 1616 aaKnown RBP16.03■□□□□ 0.16
CHD8-205ENST00000553651 ALKQ9UM73 1620 aa16.03■□□□□ 0.16
CHD8-205ENST00000553651 NEURL4Q96JN8 1562 aa16.03■□□□□ 0.16
CHD8-205ENST00000553651 GPATCH8Q9UKJ3 1502 aaKnown RBP16.03■□□□□ 0.16
CHD8-205ENST00000553651 A2ML1A8K2U0 1454 aa16.03■□□□□ 0.16
CHD8-205ENST00000553651 A2MP01023 1474 aa16.03■□□□□ 0.16
CHD8-205ENST00000553651 HNRNPMP52272 730 aaKnown RBP eCLIP16.02■□□□□ 0.16
CHD8-205ENST00000553651 KIAA1107Q9UPP5 1409 aa16.01■□□□□ 0.15
CHD8-205ENST00000553651 CPS1P31327 1500 aa16■□□□□ 0.15
CHD8-205ENST00000553651 ZNF777Q9ULD5 760 aaPredicted RBP15.99■□□□□ 0.15
CHD8-205ENST00000553651 SHANK2Q9UPX8 1470 aa15.98■□□□□ 0.15
CHD8-205ENST00000553651 PIP4K2BP78356 416 aa15.98■□□□□ 0.15
CHD8-205ENST00000553651 POLR1AO95602 1720 aaPredicted RBP15.97■□□□□ 0.15
CHD8-205ENST00000553651 GGT6Q6P531 493 aa15.97■□□□□ 0.15
CHD8-205ENST00000553651 VWDEQ8N2E2 1590 aa15.96■□□□□ 0.15
CHD8-205ENST00000553651 TOM1O60784 492 aa15.96■□□□□ 0.15
CHD8-205ENST00000553651 PLEKHH2Q8IVE3 1493 aa15.95■□□□□ 0.14
CHD8-205ENST00000553651 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
CHD8-205ENST00000553651 FYCO1Q9BQS8 1478 aa15.94■□□□□ 0.14
CHD8-205ENST00000553651 ADGBQ8N7X0 1667 aa15.94■□□□□ 0.14
CHD8-205ENST00000553651 FBXO31Q5XUX0 539 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms