RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 MAGI2Q86UL8 1455 aa11.7□□□□□ -0.54
LETMD1-236ENST00000553043 RICTORQ6R327 1708 aa11.69□□□□□ -0.54
LETMD1-236ENST00000553043 PLEKHD1A6NEE1 506 aa11.69□□□□□ -0.54
LETMD1-236ENST00000553043 ZNF335Q9H4Z2 1342 aaPredicted RBP11.68□□□□□ -0.54
LETMD1-236ENST00000553043 SCAF1Q9H7N4 1312 aaKnown RBP11.68□□□□□ -0.54
LETMD1-236ENST00000553043 HSPA1LP34931 641 aa11.68□□□□□ -0.54
LETMD1-236ENST00000553043 PHF23Q9BUL5 403 aaPredicted RBP11.68□□□□□ -0.54
LETMD1-236ENST00000553043 ZMYM4Q5VZL5 1548 aa11.68□□□□□ -0.54
LETMD1-236ENST00000553043 ATP10AO60312 1499 aa11.67□□□□□ -0.54
LETMD1-236ENST00000553043 HECW1Q76N89 1606 aa11.66□□□□□ -0.54
LETMD1-236ENST00000553043 SCAPERQ9BY12 1400 aa11.66□□□□□ -0.54
LETMD1-236ENST00000553043 PIP4K2BP78356 416 aa11.65□□□□□ -0.54
LETMD1-236ENST00000553043 C9orf84Q5VXU9 1444 aa11.65□□□□□ -0.54
LETMD1-236ENST00000553043 CTTNBP2Q8WZ74 1663 aa11.65□□□□□ -0.55
LETMD1-236ENST00000553043 MED1Q15648 1581 aaPredicted RBP11.64□□□□□ -0.55
LETMD1-236ENST00000553043 ESF1Q9H501 851 aaKnown RBP11.64□□□□□ -0.55
LETMD1-236ENST00000553043 NCKAP5LQ9HCH0 1330 aa11.63□□□□□ -0.55
LETMD1-236ENST00000553043 NCOA1Q15788 1441 aa11.63□□□□□ -0.55
LETMD1-236ENST00000553043 MYT1LQ9UL68 1186 aa11.63□□□□□ -0.55
LETMD1-236ENST00000553043 NUP153P49790 1475 aaKnown RBP11.62□□□□□ -0.55
LETMD1-236ENST00000553043 CFAP74Q9C0B2 1584 aa11.61□□□□□ -0.55
LETMD1-236ENST00000553043 TRAPPC8Q9Y2L5 1435 aa11.6□□□□□ -0.55
LETMD1-236ENST00000553043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.6□□□□□ -0.55
LETMD1-236ENST00000553043 RAPGEF6Q8TEU7 1601 aa11.6□□□□□ -0.55
LETMD1-236ENST00000553043 RANGAP1P46060 587 aaPredicted RBP11.6□□□□□ -0.55
LETMD1-236ENST00000553043 SETD1BQ9UPS6 1966 aaKnown RBP11.59□□□□□ -0.55
LETMD1-236ENST00000553043 AFAP1Q8N556 730 aa11.58□□□□□ -0.56
LETMD1-236ENST00000553043 TOM1O60784 492 aa11.57□□□□□ -0.56
LETMD1-236ENST00000553043 PLCH2O75038 1416 aa11.56□□□□□ -0.56
LETMD1-236ENST00000553043 EFCAB2Q5VUJ9 269 aa11.56□□□□□ -0.56
LETMD1-236ENST00000553043 SENP3Q9H4L4 574 aaPredicted RBP11.56□□□□□ -0.56
LETMD1-236ENST00000553043 CAMSAP1Q5T5Y3 1602 aa11.56□□□□□ -0.56
LETMD1-236ENST00000553043 PRXQ9BXM0 1461 aa11.56□□□□□ -0.56
LETMD1-236ENST00000553043 PKD2Q13563 968 aa11.54□□□□□ -0.56
LETMD1-236ENST00000553043 PPP6R1Q9UPN7 881 aa11.53□□□□□ -0.56
LETMD1-236ENST00000553043 C3P01024 1663 aa11.52□□□□□ -0.56
LETMD1-236ENST00000553043 SAMD9Q5K651 1589 aa11.5□□□□□ -0.57
LETMD1-236ENST00000553043 ZNF518AQ6AHZ1 1483 aa11.5□□□□□ -0.57
LETMD1-236ENST00000553043 RGS17Q9UGC6 210 aaPredicted RBP11.49□□□□□ -0.57
LETMD1-236ENST00000553043 ZMYM3Q14202 1370 aa11.48□□□□□ -0.57
LETMD1-236ENST00000553043 CNTLNQ9NXG0 1405 aa11.48□□□□□ -0.57
LETMD1-236ENST00000553043 DIP2CQ9Y2E4 1556 aa11.47□□□□□ -0.57
LETMD1-236ENST00000553043 NPATQ14207 1427 aa11.47□□□□□ -0.57
LETMD1-236ENST00000553043 ATP1B4Q9UN42 357 aaPredicted RBP11.47□□□□□ -0.57
LETMD1-236ENST00000553043 AGLP35573 1532 aa11.45□□□□□ -0.58
LETMD1-236ENST00000553043 CDK13Q14004 1512 aaKnown RBP11.45□□□□□ -0.58
LETMD1-236ENST00000553043 PLA2R1Q13018 1463 aa11.45□□□□□ -0.58
LETMD1-236ENST00000553043 TCOF1Q13428 1488 aaKnown RBP11.44□□□□□ -0.58
LETMD1-236ENST00000553043 KDM5CP41229 1560 aa11.44□□□□□ -0.58
LETMD1-236ENST00000553043 REREQ9P2R6 1566 aa11.43□□□□□ -0.58
LETMD1-236ENST00000553043 MLH3Q9UHC1 1453 aa11.43□□□□□ -0.58
LETMD1-236ENST00000553043 ARHGAP5Q13017 1502 aa11.42□□□□□ -0.58
LETMD1-236ENST00000553043 PTPRKQ15262 1439 aa11.42□□□□□ -0.58
LETMD1-236ENST00000553043 SHANK2Q9UPX8 1470 aa11.41□□□□□ -0.58
LETMD1-236ENST00000553043 POTEAQ6S8J7 498 aa11.41□□□□□ -0.58
LETMD1-236ENST00000553043 ABCA6Q8N139 1617 aa11.41□□□□□ -0.58
LETMD1-236ENST00000553043 CPS1P31327 1500 aa11.4□□□□□ -0.58
LETMD1-236ENST00000553043 CSRNP3Q8WYN3 585 aa11.4□□□□□ -0.58
LETMD1-236ENST00000553043 CDK11AQ9UQ88 783 aaPredicted RBP11.4□□□□□ -0.58
LETMD1-236ENST00000553043 CEP170BQ9Y4F5 1589 aaPredicted RBP11.38□□□□□ -0.59
LETMD1-236ENST00000553043 GGT6Q6P531 493 aa11.37□□□□□ -0.59
LETMD1-236ENST00000553043 ALKQ9UM73 1620 aa11.36□□□□□ -0.59
LETMD1-236ENST00000553043 MYO5CQ9NQX4 1742 aa11.36□□□□□ -0.59
LETMD1-236ENST00000553043 MYO3AQ8NEV4 1616 aa11.35□□□□□ -0.59
LETMD1-236ENST00000553043 KIF14Q15058 1648 aa11.35□□□□□ -0.59
LETMD1-236ENST00000553043 ANKLE2Q86XL3 938 aa11.34□□□□□ -0.59
LETMD1-236ENST00000553043 ZNF142P52746 1687 aaPredicted RBP11.33□□□□□ -0.6
LETMD1-236ENST00000553043 A2ML1A8K2U0 1454 aa11.33□□□□□ -0.6
LETMD1-236ENST00000553043 TROQ12816 1431 aaPredicted RBP11.33□□□□□ -0.6
LETMD1-236ENST00000553043 MROH2AA6NES4 1674 aa11.33□□□□□ -0.6
LETMD1-236ENST00000553043 ZNF777Q9ULD5 760 aaPredicted RBP11.32□□□□□ -0.6
LETMD1-236ENST00000553043 SUPT6HQ7KZ85 1726 aaKnown RBP11.32□□□□□ -0.6
LETMD1-236ENST00000553043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.31□□□□□ -0.6
LETMD1-236ENST00000553043 CLIP1P30622 1438 aa11.31□□□□□ -0.6
LETMD1-236ENST00000553043 SPAG9O60271 1321 aaKnown RBP11.31□□□□□ -0.6
LETMD1-236ENST00000553043 FBXO31Q5XUX0 539 aaPredicted RBP11.3□□□□□ -0.6
LETMD1-236ENST00000553043 KIDINS220Q9ULH0 1771 aa11.3□□□□□ -0.6
LETMD1-236ENST00000553043 DNMT1P26358 1616 aaKnown RBP11.3□□□□□ -0.6
LETMD1-236ENST00000553043 CLTCQ00610 1675 aaKnown RBP11.3□□□□□ -0.6
LETMD1-236ENST00000553043 ABCC1P33527 1531 aa11.3□□□□□ -0.6
LETMD1-236ENST00000553043 VWDEQ8N2E2 1590 aa11.29□□□□□ -0.6
LETMD1-236ENST00000553043 NEURL4Q96JN8 1562 aa11.29□□□□□ -0.6
LETMD1-236ENST00000553043 HNRNPMP52272 730 aaKnown RBP eCLIP11.28□□□□□ -0.6
LETMD1-236ENST00000553043 THEMISQ8N1K5 641 aaPredicted RBP11.28□□□□□ -0.6
LETMD1-236ENST00000553043 UPF1Q92900 1129 aaKnown RBP eCLIP11.28□□□□□ -0.64e-9■□□□□ 10.4
LETMD1-236ENST00000553043 LRRC7Q96NW7 1537 aa11.28□□□□□ -0.6
LETMD1-236ENST00000553043 NPHP4O75161 1426 aaPredicted RBP11.27□□□□□ -0.6
LETMD1-236ENST00000553043 TNRQ92752 1358 aa11.27□□□□□ -0.61
LETMD1-236ENST00000553043 FMN1Q68DA7 1419 aa11.26□□□□□ -0.61
LETMD1-236ENST00000553043 A2MP01023 1474 aa11.25□□□□□ -0.61
LETMD1-236ENST00000553043 SAMD9LQ8IVG5 1584 aa11.25□□□□□ -0.61
LETMD1-236ENST00000553043 CDC42BPBQ9Y5S2 1711 aa11.25□□□□□ -0.61
LETMD1-236ENST00000553043 ITSN2Q9NZM3 1697 aa11.24□□□□□ -0.61
LETMD1-236ENST00000553043 EHMT2Q96KQ7 1210 aa11.24□□□□□ -0.61
LETMD1-236ENST00000553043 SETD1AO15047 1707 aaKnown RBP11.23□□□□□ -0.61
LETMD1-236ENST00000553043 MED14O60244 1454 aa11.22□□□□□ -0.61
LETMD1-236ENST00000553043 POLR1AO95602 1720 aaPredicted RBP11.22□□□□□ -0.61
LETMD1-236ENST00000553043 TRIM52Q96A61 297 aa11.22□□□□□ -0.61
LETMD1-236ENST00000553043 RNF17Q9BXT8 1623 aaKnown RBP11.22□□□□□ -0.61
LETMD1-236ENST00000553043 PREX2Q70Z35 1606 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms