RNA–Protein interactions for RNA: ENST00000552792.5

PFKM-228, Transcript of phosphofructokinase, muscle, humanhuman

TSL 4

Gene PFKM, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-228ENST00000552792 PTPRTO14522 1441 aa26.65■■□□□ 1.86
PFKM-228ENST00000552792 SETD1BQ9UPS6 1966 aaKnown RBP26.62■■□□□ 1.85
PFKM-228ENST00000552792 ARHGEF12Q9NZN5 1544 aa26.62■■□□□ 1.85
PFKM-228ENST00000552792 CEBPAP49715 358 aaPredicted RBP26.62■■□□□ 1.85
PFKM-228ENST00000552792 LTBP4Q8N2S1 1624 aa26.6■■□□□ 1.85
PFKM-228ENST00000552792 HECW1Q76N89 1606 aa26.59■■□□□ 1.85
PFKM-228ENST00000552792 C9orf84Q5VXU9 1444 aa26.53■■□□□ 1.84
PFKM-228ENST00000552792 ATP10AO60312 1499 aa26.51■■□□□ 1.83
PFKM-228ENST00000552792 UBAP1LF5GYI3 381 aa26.51■■□□□ 1.83
PFKM-228ENST00000552792 PLEKHD1A6NEE1 506 aa26.5■■□□□ 1.83
PFKM-228ENST00000552792 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.47■■□□□ 1.83
PFKM-228ENST00000552792 NUP153P49790 1475 aaKnown RBP26.45■■□□□ 1.82
PFKM-228ENST00000552792 SCAPERQ9BY12 1400 aa26.44■■□□□ 1.82
PFKM-228ENST00000552792 MED1Q15648 1581 aaPredicted RBP26.42■■□□□ 1.82
PFKM-228ENST00000552792 SAMD9Q5K651 1589 aa26.42■■□□□ 1.82
PFKM-228ENST00000552792 C3P01024 1663 aa26.41■■□□□ 1.82
PFKM-228ENST00000552792 ESF1Q9H501 851 aaKnown RBP26.39■■□□□ 1.82
PFKM-228ENST00000552792 NCOA1Q15788 1441 aa26.39■■□□□ 1.81
PFKM-228ENST00000552792 PRXQ9BXM0 1461 aa26.36■■□□□ 1.81
PFKM-228ENST00000552792 PHF23Q9BUL5 403 aaPredicted RBP26.35■■□□□ 1.81
PFKM-228ENST00000552792 MYT1LQ9UL68 1186 aa26.34■■□□□ 1.81
PFKM-228ENST00000552792 SCAF1Q9H7N4 1312 aaKnown RBP26.34■■□□□ 1.81
PFKM-228ENST00000552792 TRAPPC8Q9Y2L5 1435 aa26.31■■□□□ 1.8
PFKM-228ENST00000552792 CAMSAP1Q5T5Y3 1602 aa26.3■■□□□ 1.8
PFKM-228ENST00000552792 ZNF335Q9H4Z2 1342 aaPredicted RBP26.3■■□□□ 1.8
PFKM-228ENST00000552792 PLCH2O75038 1416 aa26.27■■□□□ 1.8
PFKM-228ENST00000552792 MYO5CQ9NQX4 1742 aa26.26■■□□□ 1.79
PFKM-228ENST00000552792 ZNF518AQ6AHZ1 1483 aa26.26■■□□□ 1.79
PFKM-228ENST00000552792 HSPA1LP34931 641 aa26.24■■□□□ 1.79
PFKM-228ENST00000552792 RANGAP1P46060 587 aaPredicted RBP26.22■■□□□ 1.79
PFKM-228ENST00000552792 EFCAB2Q5VUJ9 269 aa26.22■■□□□ 1.79
PFKM-228ENST00000552792 PIP4K2BP78356 416 aa26.21■■□□□ 1.79
PFKM-228ENST00000552792 SUPT6HQ7KZ85 1726 aaKnown RBP26.21■■□□□ 1.79
PFKM-228ENST00000552792 DIP2CQ9Y2E4 1556 aa26.2■■□□□ 1.79
PFKM-228ENST00000552792 REREQ9P2R6 1566 aa26.2■■□□□ 1.78
PFKM-228ENST00000552792 NCKAP5LQ9HCH0 1330 aa26.19■■□□□ 1.78
PFKM-228ENST00000552792 KDM5CP41229 1560 aa26.17■■□□□ 1.78
PFKM-228ENST00000552792 CNTLNQ9NXG0 1405 aa26.17■■□□□ 1.78
PFKM-228ENST00000552792 AGLP35573 1532 aa26.15■■□□□ 1.78
PFKM-228ENST00000552792 ABCA6Q8N139 1617 aa26.14■■□□□ 1.77
PFKM-228ENST00000552792 TOM1O60784 492 aa26.13■■□□□ 1.77
PFKM-228ENST00000552792 CDK13Q14004 1512 aaKnown RBP26.13■■□□□ 1.77
PFKM-228ENST00000552792 AFAP1Q8N556 730 aa26.12■■□□□ 1.77
PFKM-228ENST00000552792 PKD2Q13563 968 aa26.11■■□□□ 1.77
PFKM-228ENST00000552792 NPATQ14207 1427 aa26.11■■□□□ 1.77
PFKM-228ENST00000552792 ARHGAP5Q13017 1502 aa26.1■■□□□ 1.77
PFKM-228ENST00000552792 MROH2AA6NES4 1674 aa26.08■■□□□ 1.77
PFKM-228ENST00000552792 PLA2R1Q13018 1463 aa26.07■■□□□ 1.76
PFKM-228ENST00000552792 PPP6R1Q9UPN7 881 aa26.07■■□□□ 1.76
PFKM-228ENST00000552792 ZNF142P52746 1687 aaPredicted RBP26.06■■□□□ 1.76
PFKM-228ENST00000552792 MYO3AQ8NEV4 1616 aa26.04■■□□□ 1.76
PFKM-228ENST00000552792 MLH3Q9UHC1 1453 aa26.03■■□□□ 1.76
PFKM-228ENST00000552792 KIF14Q15058 1648 aa26.03■■□□□ 1.76
PFKM-228ENST00000552792 CEP170BQ9Y4F5 1589 aaPredicted RBP26■■□□□ 1.75
PFKM-228ENST00000552792 TCOF1Q13428 1488 aaKnown RBP26■■□□□ 1.75
PFKM-228ENST00000552792 CPS1P31327 1500 aa25.98■■□□□ 1.75
PFKM-228ENST00000552792 ATP1B4Q9UN42 357 aaPredicted RBP25.97■■□□□ 1.75
PFKM-228ENST00000552792 CDK11AQ9UQ88 783 aaPredicted RBP25.97■■□□□ 1.75
PFKM-228ENST00000552792 ZMYM3Q14202 1370 aa25.96■■□□□ 1.75
PFKM-228ENST00000552792 SENP3Q9H4L4 574 aaPredicted RBP25.93■■□□□ 1.74
PFKM-228ENST00000552792 PTPRKQ15262 1439 aa25.93■■□□□ 1.74
PFKM-228ENST00000552792 CLTCQ00610 1675 aaKnown RBP25.93■■□□□ 1.74
PFKM-228ENST00000552792 ITSN2Q9NZM3 1697 aa25.9■■□□□ 1.74
PFKM-228ENST00000552792 KIDINS220Q9ULH0 1771 aa25.9■■□□□ 1.74
PFKM-228ENST00000552792 POLR1AO95602 1720 aaPredicted RBP25.9■■□□□ 1.74
PFKM-228ENST00000552792 CLIP1P30622 1438 aa25.89■■□□□ 1.74
PFKM-228ENST00000552792 CSRNP3Q8WYN3 585 aa25.89■■□□□ 1.74
PFKM-228ENST00000552792 CDC42BPBQ9Y5S2 1711 aa25.88■■□□□ 1.73
PFKM-228ENST00000552792 SHANK2Q9UPX8 1470 aa25.87■■□□□ 1.73
PFKM-228ENST00000552792 ABCC1P33527 1531 aa25.87■■□□□ 1.73
PFKM-228ENST00000552792 TROQ12816 1431 aaPredicted RBP25.82■■□□□ 1.72
PFKM-228ENST00000552792 PREX2Q70Z35 1606 aa25.81■■□□□ 1.72
PFKM-228ENST00000552792 A2ML1A8K2U0 1454 aa25.79■■□□□ 1.72
PFKM-228ENST00000552792 DNMT1P26358 1616 aaKnown RBP25.78■■□□□ 1.72
PFKM-228ENST00000552792 FMN1Q68DA7 1419 aa25.76■■□□□ 1.71
PFKM-228ENST00000552792 NEURL4Q96JN8 1562 aa25.75■■□□□ 1.71
PFKM-228ENST00000552792 RGS17Q9UGC6 210 aaPredicted RBP25.74■■□□□ 1.71
PFKM-228ENST00000552792 ALKQ9UM73 1620 aa25.74■■□□□ 1.71
PFKM-228ENST00000552792 SAMD9LQ8IVG5 1584 aa25.72■■□□□ 1.71
PFKM-228ENST00000552792 GGT6Q6P531 493 aa25.7■■□□□ 1.7
PFKM-228ENST00000552792 RNF17Q9BXT8 1623 aaKnown RBP25.7■■□□□ 1.7
PFKM-228ENST00000552792 VWDEQ8N2E2 1590 aa25.69■■□□□ 1.7
PFKM-228ENST00000552792 SPAG9O60271 1321 aaKnown RBP25.67■■□□□ 1.7
PFKM-228ENST00000552792 ANKLE2Q86XL3 938 aa25.65■■□□□ 1.7
PFKM-228ENST00000552792 CDC42BPAQ5VT25 1732 aa25.64■■□□□ 1.7
PFKM-228ENST00000552792 PLXNC1O60486 1568 aa25.64■■□□□ 1.69
PFKM-228ENST00000552792 ATP7AQ04656 1500 aa25.63■■□□□ 1.69
PFKM-228ENST00000552792 ZNF777Q9ULD5 760 aaPredicted RBP25.63■■□□□ 1.69
PFKM-228ENST00000552792 A2MP01023 1474 aa25.63■■□□□ 1.69
PFKM-228ENST00000552792 SETD1AO15047 1707 aaKnown RBP25.63■■□□□ 1.69
PFKM-228ENST00000552792 SYNMO15061 1565 aa25.61■■□□□ 1.69
PFKM-228ENST00000552792 LRRIQ1Q96JM4 1722 aa25.61■■□□□ 1.69
PFKM-228ENST00000552792 SYCP2Q9BX26 1530 aa25.61■■□□□ 1.69
PFKM-228ENST00000552792 POTEAQ6S8J7 498 aa25.6■■□□□ 1.69
PFKM-228ENST00000552792 EEA1Q15075 1411 aa25.6■■□□□ 1.69
PFKM-228ENST00000552792 NPHP4O75161 1426 aaPredicted RBP25.59■■□□□ 1.69
PFKM-228ENST00000552792 TNRQ92752 1358 aa25.58■■□□□ 1.69
PFKM-228ENST00000552792 IQGAP1P46940 1657 aa25.58■■□□□ 1.68
PFKM-228ENST00000552792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.57■■□□□ 1.68
PFKM-228ENST00000552792 LRRC7Q96NW7 1537 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms