RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 KDM6BO15054 1643 aa20.26■□□□□ 0.83
RAB3IP-216ENST00000552199 CFDP1Q9UEE9 299 aaPredicted RBP20.25■□□□□ 0.83
RAB3IP-216ENST00000552199 CAMSAP2Q08AD1 1489 aa20.24■□□□□ 0.83
RAB3IP-216ENST00000552199 MIER1Q8N108 512 aa20.23■□□□□ 0.83
RAB3IP-216ENST00000552199 ABCC10Q5T3U5 1492 aa20.22■□□□□ 0.83
RAB3IP-216ENST00000552199 ACIN1Q9UKV3 1341 aaKnown RBP20.21■□□□□ 0.83
RAB3IP-216ENST00000552199 PPP1R15AO75807 674 aaPredicted RBP20.21■□□□□ 0.83
RAB3IP-216ENST00000552199 CDC42BPAQ5VT25 1732 aa20.2■□□□□ 0.82
RAB3IP-216ENST00000552199 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
RAB3IP-216ENST00000552199 DENND4BO75064 1496 aaPredicted RBP20.18■□□□□ 0.82
RAB3IP-216ENST00000552199 TONSLQ96HA7 1378 aa20.17■□□□□ 0.82
RAB3IP-216ENST00000552199 ADGBQ8N7X0 1667 aa20.16■□□□□ 0.82
RAB3IP-216ENST00000552199 ERCC6L2Q5T890 1561 aa20.16■□□□□ 0.82
RAB3IP-216ENST00000552199 CLASP1Q7Z460 1538 aa20.16■□□□□ 0.82
RAB3IP-216ENST00000552199 CROCC2H7BZ55 1655 aa20.16■□□□□ 0.82
RAB3IP-216ENST00000552199 ZNF777Q9ULD5 760 aaPredicted RBP20.15■□□□□ 0.82
RAB3IP-216ENST00000552199 MPHOSPH9Q99550 1183 aa20.14■□□□□ 0.81
RAB3IP-216ENST00000552199 ADGRL2O95490 1459 aa20.13■□□□□ 0.81
RAB3IP-216ENST00000552199 NCOA1Q15788 1441 aa20.12■□□□□ 0.81
RAB3IP-216ENST00000552199 ABCC2Q92887 1545 aa20.1■□□□□ 0.81
RAB3IP-216ENST00000552199 CENPBP07199 599 aaPredicted RBP20.08■□□□□ 0.81
RAB3IP-216ENST00000552199 ANKRD30AQ9BXX3 1397 aa20.06■□□□□ 0.8
RAB3IP-216ENST00000552199 KDM5BQ9UGL1 1544 aa20.06■□□□□ 0.8
RAB3IP-216ENST00000552199 SHANK2Q9UPX8 1470 aa20.06■□□□□ 0.8
RAB3IP-216ENST00000552199 PREX2Q70Z35 1606 aa20.05■□□□□ 0.8
RAB3IP-216ENST00000552199 CDC42BPBQ9Y5S2 1711 aa20.04■□□□□ 0.8
RAB3IP-216ENST00000552199 ARHGEF5Q12774 1597 aa20.03■□□□□ 0.8
RAB3IP-216ENST00000552199 ANKRD30BQ9BXX2 1392 aa20.02■□□□□ 0.79
RAB3IP-216ENST00000552199 C9orf84Q5VXU9 1444 aa20.01■□□□□ 0.79
RAB3IP-216ENST00000552199 UHRF1BP1LA0JNW5 1464 aa20.01■□□□□ 0.79
RAB3IP-216ENST00000552199 FOXD1Q16676 465 aa20■□□□□ 0.79
RAB3IP-216ENST00000552199 SLC4A1APQ9BWU0 796 aaKnown RBP20■□□□□ 0.79
RAB3IP-216ENST00000552199 SAMD9LQ8IVG5 1584 aa20■□□□□ 0.79
RAB3IP-216ENST00000552199 PZPP20742 1482 aa20■□□□□ 0.79
RAB3IP-216ENST00000552199 MBD5Q9P267 1494 aa19.99■□□□□ 0.79
RAB3IP-216ENST00000552199 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.99■□□□□ 0.79
RAB3IP-216ENST00000552199 TTC37Q6PGP7 1564 aa19.98■□□□□ 0.79
RAB3IP-216ENST00000552199 TSPY4P0CV99 314 aa19.98■□□□□ 0.79
RAB3IP-216ENST00000552199 TSPY10P0CW01 314 aa19.98■□□□□ 0.79
RAB3IP-216ENST00000552199 HNRNPMP52272 730 aaKnown RBP eCLIP19.98■□□□□ 0.79
RAB3IP-216ENST00000552199 SCAF1Q9H7N4 1312 aaKnown RBP19.97■□□□□ 0.79
RAB3IP-216ENST00000552199 ZCCHC11Q5TAX3 1644 aaKnown RBP19.97■□□□□ 0.79
RAB3IP-216ENST00000552199 ANKRD50Q9ULJ7 1429 aa19.97■□□□□ 0.79
RAB3IP-216ENST00000552199 RPRD2Q5VT52 1461 aaKnown RBP19.96■□□□□ 0.79
RAB3IP-216ENST00000552199 YTHDC1Q96MU7 727 aaKnown RBP19.96■□□□□ 0.79
RAB3IP-216ENST00000552199 RSPH4AQ5TD94 716 aa19.95■□□□□ 0.78
RAB3IP-216ENST00000552199 CCDC141Q6ZP82 1450 aa19.94■□□□□ 0.78
RAB3IP-216ENST00000552199 MYO5CQ9NQX4 1742 aa19.94■□□□□ 0.78
RAB3IP-216ENST00000552199 ARHGAP5Q13017 1502 aa19.93■□□□□ 0.78
RAB3IP-216ENST00000552199 L3MBTL2Q969R5 705 aa19.92■□□□□ 0.78
RAB3IP-216ENST00000552199 HIRIP3Q9BW71 556 aaPredicted RBP19.92■□□□□ 0.78
RAB3IP-216ENST00000552199 KIAA1107Q9UPP5 1409 aa19.91■□□□□ 0.78
RAB3IP-216ENST00000552199 DDX10Q13206 875 aaKnown RBP19.9■□□□□ 0.78
RAB3IP-216ENST00000552199 KIF15Q9NS87 1388 aa19.9■□□□□ 0.78
RAB3IP-216ENST00000552199 KCNH8Q96L42 1107 aa19.89■□□□□ 0.77
RAB3IP-216ENST00000552199 SYCP2Q9BX26 1530 aa19.89■□□□□ 0.77
RAB3IP-216ENST00000552199 PLEKHH2Q8IVE3 1493 aa19.88■□□□□ 0.77
RAB3IP-216ENST00000552199 MAST1Q9Y2H9 1570 aa19.88■□□□□ 0.77
RAB3IP-216ENST00000552199 KDM5DQ9BY66 1539 aa19.87■□□□□ 0.77
RAB3IP-216ENST00000552199 TEX14Q8IWB6 1497 aa19.87■□□□□ 0.77
RAB3IP-216ENST00000552199 PKD2Q13563 968 aa19.86■□□□□ 0.77
RAB3IP-216ENST00000552199 PLCH2O75038 1416 aa19.85■□□□□ 0.77
RAB3IP-216ENST00000552199 NUP155O75694 1391 aa19.85■□□□□ 0.77
RAB3IP-216ENST00000552199 EFCAB2Q5VUJ9 269 aa19.8■□□□□ 0.76
RAB3IP-216ENST00000552199 HSPA5P11021 654 aaKnown RBP19.8■□□□□ 0.76
RAB3IP-216ENST00000552199 ARHGEF12Q9NZN5 1544 aa19.79■□□□□ 0.76
RAB3IP-216ENST00000552199 PLXNC1O60486 1568 aa19.79■□□□□ 0.76
RAB3IP-216ENST00000552199 NBPF8Q3BBV2 869 aa19.78■□□□□ 0.76
RAB3IP-216ENST00000552199 EIF4G2P78344 907 aaKnown RBP eCLIP19.78■□□□□ 0.76
RAB3IP-216ENST00000552199 ARAP3Q8WWN8 1544 aa19.76■□□□□ 0.75
RAB3IP-216ENST00000552199 ABCC1P33527 1531 aa19.75■□□□□ 0.75
RAB3IP-216ENST00000552199 WDR7Q9Y4E6 1490 aa19.75■□□□□ 0.75
RAB3IP-216ENST00000552199 GTF3C3Q9Y5Q9 886 aa19.75■□□□□ 0.75
RAB3IP-216ENST00000552199 OSCARQ8IYS5 282 aa19.74■□□□□ 0.75
RAB3IP-216ENST00000552199 UNC13BO14795 1591 aa19.74■□□□□ 0.75
RAB3IP-216ENST00000552199 FAM135AQ9P2D6 1515 aa19.74■□□□□ 0.75
RAB3IP-216ENST00000552199 DUOX2Q9NRD8 1548 aa19.72■□□□□ 0.75
RAB3IP-216ENST00000552199 ANP32CO43423 234 aa19.7■□□□□ 0.74
RAB3IP-216ENST00000552199 TRAPPC8Q9Y2L5 1435 aa19.69■□□□□ 0.74
RAB3IP-216ENST00000552199 WASHC2AQ641Q2 1341 aa19.69■□□□□ 0.74
RAB3IP-216ENST00000552199 ABCA9Q8IUA7 1624 aa19.69■□□□□ 0.74
RAB3IP-216ENST00000552199 ERBINQ96RT1 1412 aa19.67■□□□□ 0.74
RAB3IP-216ENST00000552199 CCER2I3L3R5 266 aa19.66■□□□□ 0.74
RAB3IP-216ENST00000552199 IQGAP3Q86VI3 1631 aa19.66■□□□□ 0.74
RAB3IP-216ENST00000552199 SPATA31E1Q6ZUB1 1445 aa19.66■□□□□ 0.74
RAB3IP-216ENST00000552199 UHRF1BP1Q6BDS2 1440 aa19.65■□□□□ 0.74
RAB3IP-216ENST00000552199 ASXL2Q76L83 1435 aa19.65■□□□□ 0.74
RAB3IP-216ENST00000552199 RTEL1-TNFRSF6BF6WH68 1400 aa19.65■□□□□ 0.74
RAB3IP-216ENST00000552199 MAGI2Q86UL8 1455 aa19.64■□□□□ 0.73
RAB3IP-216ENST00000552199 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.63■□□□□ 0.735e-6■■■■□ 19.5
RAB3IP-216ENST00000552199 SPAG9O60271 1321 aaKnown RBP19.62■□□□□ 0.73
RAB3IP-216ENST00000552199 FANCAO15360 1455 aa19.62■□□□□ 0.73
RAB3IP-216ENST00000552199 CCDC7Q96M83 1385 aa19.61■□□□□ 0.73
RAB3IP-216ENST00000552199 POLR1AO95602 1720 aaPredicted RBP19.61■□□□□ 0.73
RAB3IP-216ENST00000552199 C11orf95C9JLR9 678 aaPredicted RBP19.61■□□□□ 0.73
RAB3IP-216ENST00000552199 AFAP1Q8N556 730 aa19.6■□□□□ 0.73
RAB3IP-216ENST00000552199 ZFYVE16Q7Z3T8 1539 aa19.6■□□□□ 0.73
RAB3IP-216ENST00000552199 NPM1P06748 294 aaKnown RBP eCLIP19.59■□□□□ 0.73
RAB3IP-216ENST00000552199 ZNF326Q5BKZ1 582 aaKnown RBP19.59■□□□□ 0.73
RAB3IP-216ENST00000552199 PLA2R1Q13018 1463 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms