RNA–Protein interactions for RNA: ENST00000552187.1

TMEM106C-218, Transcript of transmembrane protein 106C, humanhuman

TSL 2

Gene TMEM106C, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-218ENST00000552187 SUPT5HO00267 1087 aaKnown RBP14.18□□□□□ -0.14
TMEM106C-218ENST00000552187 NCBP3Q53F19 620 aaKnown RBP14.18□□□□□ -0.14
TMEM106C-218ENST00000552187 FHOD3Q2V2M9 1422 aa14.15□□□□□ -0.14
TMEM106C-218ENST00000552187 ZFYVE16Q7Z3T8 1539 aa14.15□□□□□ -0.14
TMEM106C-218ENST00000552187 ATP10BO94823 1461 aa14.15□□□□□ -0.14
TMEM106C-218ENST00000552187 RICTORQ6R327 1708 aa14.15□□□□□ -0.14
TMEM106C-218ENST00000552187 GOLGA3Q08378 1498 aa14.13□□□□□ -0.15
TMEM106C-218ENST00000552187 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
TMEM106C-218ENST00000552187 ARHGEF12Q9NZN5 1544 aa14.13□□□□□ -0.15
TMEM106C-218ENST00000552187 RAPGEF2Q9Y4G8 1499 aa14.12□□□□□ -0.15
TMEM106C-218ENST00000552187 EFCAB5A4FU69 1503 aa14.12□□□□□ -0.15
TMEM106C-218ENST00000552187 ZMYM4Q5VZL5 1548 aa14.11□□□□□ -0.15
TMEM106C-218ENST00000552187 HSPA1LP34931 641 aa14.11□□□□□ -0.15
TMEM106C-218ENST00000552187 ZNF335Q9H4Z2 1342 aaPredicted RBP14.09□□□□□ -0.15
TMEM106C-218ENST00000552187 SETD1BQ9UPS6 1966 aaKnown RBP14.09□□□□□ -0.15
TMEM106C-218ENST00000552187 NCOA1Q15788 1441 aa14.07□□□□□ -0.16
TMEM106C-218ENST00000552187 MAGI2Q86UL8 1455 aa14.06□□□□□ -0.16
TMEM106C-218ENST00000552187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.06□□□□□ -0.16
TMEM106C-218ENST00000552187 HNRNPUL2Q1KMD3 747 aaKnown RBP14.06□□□□□ -0.16
TMEM106C-218ENST00000552187 HECW1Q76N89 1606 aa14.04□□□□□ -0.16
TMEM106C-218ENST00000552187 PIP4K2BP78356 416 aa14.04□□□□□ -0.16
TMEM106C-218ENST00000552187 FAM9AQ8IZU1 332 aaPredicted RBP14.03□□□□□ -0.16
TMEM106C-218ENST00000552187 ATP10AO60312 1499 aa14.02□□□□□ -0.16
TMEM106C-218ENST00000552187 C9orf84Q5VXU9 1444 aa14.02□□□□□ -0.16
TMEM106C-218ENST00000552187 CTTNBP2Q8WZ74 1663 aa14.01□□□□□ -0.17
TMEM106C-218ENST00000552187 CFAP74Q9C0B2 1584 aa14.01□□□□□ -0.17
TMEM106C-218ENST00000552187 P3H3Q8IVL6 736 aa14.01□□□□□ -0.17
TMEM106C-218ENST00000552187 NCKAP5LQ9HCH0 1330 aa13.98□□□□□ -0.17
TMEM106C-218ENST00000552187 TRAPPC8Q9Y2L5 1435 aa13.97□□□□□ -0.17
TMEM106C-218ENST00000552187 CAMSAP1Q5T5Y3 1602 aa13.97□□□□□ -0.17
TMEM106C-218ENST00000552187 SCAPERQ9BY12 1400 aa13.96□□□□□ -0.18
TMEM106C-218ENST00000552187 C3P01024 1663 aa13.95□□□□□ -0.18
TMEM106C-218ENST00000552187 TOM1O60784 492 aa13.94□□□□□ -0.18
TMEM106C-218ENST00000552187 NPM3O75607 178 aaKnown RBP13.94□□□□□ -0.18
TMEM106C-218ENST00000552187 RAPGEF6Q8TEU7 1601 aa13.93□□□□□ -0.18
TMEM106C-218ENST00000552187 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.92□□□□□ -0.18
TMEM106C-218ENST00000552187 PLEKHD1A6NEE1 506 aa13.92□□□□□ -0.18
TMEM106C-218ENST00000552187 ESF1Q9H501 851 aaKnown RBP13.92□□□□□ -0.18
TMEM106C-218ENST00000552187 NUP153P49790 1475 aaKnown RBP13.9□□□□□ -0.18
TMEM106C-218ENST00000552187 RGS17Q9UGC6 210 aaPredicted RBP13.89□□□□□ -0.19
TMEM106C-218ENST00000552187 PKD2Q13563 968 aa13.87□□□□□ -0.19
TMEM106C-218ENST00000552187 MYT1LQ9UL68 1186 aa13.87□□□□□ -0.19
TMEM106C-218ENST00000552187 RNF216Q9NWF9 866 aaPredicted RBP13.85□□□□□ -0.19
TMEM106C-218ENST00000552187 PLA2R1Q13018 1463 aa13.83□□□□□ -0.2
TMEM106C-218ENST00000552187 TCOF1Q13428 1488 aaKnown RBP13.83□□□□□ -0.2
TMEM106C-218ENST00000552187 PLCH2O75038 1416 aa13.82□□□□□ -0.2
TMEM106C-218ENST00000552187 NPATQ14207 1427 aa13.82□□□□□ -0.2
TMEM106C-218ENST00000552187 DIP2CQ9Y2E4 1556 aa13.82□□□□□ -0.2
TMEM106C-218ENST00000552187 SRCAPQ6ZRS2 3230 aa13.82□□□□□ -0.2
TMEM106C-218ENST00000552187 CNTLNQ9NXG0 1405 aa13.81□□□□□ -0.2
TMEM106C-218ENST00000552187 ZNF518AQ6AHZ1 1483 aa13.81□□□□□ -0.2
TMEM106C-218ENST00000552187 AFAP1Q8N556 730 aa13.81□□□□□ -0.2
TMEM106C-218ENST00000552187 CPS1P31327 1500 aa13.8□□□□□ -0.2
TMEM106C-218ENST00000552187 AGLP35573 1532 aa13.8□□□□□ -0.2
TMEM106C-218ENST00000552187 PTPRKQ15262 1439 aa13.8□□□□□ -0.2
TMEM106C-218ENST00000552187 REREQ9P2R6 1566 aa13.79□□□□□ -0.2
TMEM106C-218ENST00000552187 EFCAB2Q5VUJ9 269 aa13.79□□□□□ -0.2
TMEM106C-218ENST00000552187 POTEAQ6S8J7 498 aa13.79□□□□□ -0.2
TMEM106C-218ENST00000552187 SAMD9Q5K651 1589 aa13.79□□□□□ -0.2
TMEM106C-218ENST00000552187 ALKQ9UM73 1620 aa13.79□□□□□ -0.2
TMEM106C-218ENST00000552187 HOXD11P31277 338 aaPredicted RBP13.78□□□□□ -0.2
TMEM106C-218ENST00000552187 KDM5CP41229 1560 aa13.78□□□□□ -0.2
TMEM106C-218ENST00000552187 ABCA6Q8N139 1617 aa13.76□□□□□ -0.21
TMEM106C-218ENST00000552187 PRXQ9BXM0 1461 aa13.76□□□□□ -0.21
TMEM106C-218ENST00000552187 SHANK2Q9UPX8 1470 aa13.76□□□□□ -0.21
TMEM106C-218ENST00000552187 MYO3AQ8NEV4 1616 aa13.75□□□□□ -0.21
TMEM106C-218ENST00000552187 ZMYM3Q14202 1370 aa13.75□□□□□ -0.21
TMEM106C-218ENST00000552187 ZNF142P52746 1687 aaPredicted RBP13.75□□□□□ -0.21
TMEM106C-218ENST00000552187 CEP170BQ9Y4F5 1589 aaPredicted RBP13.75□□□□□ -0.21
TMEM106C-218ENST00000552187 SUPT6HQ7KZ85 1726 aaKnown RBP13.74□□□□□ -0.21
TMEM106C-218ENST00000552187 SETD1AO15047 1707 aaKnown RBP13.73□□□□□ -0.21
TMEM106C-218ENST00000552187 RANGAP1P46060 587 aaPredicted RBP13.71□□□□□ -0.21
TMEM106C-218ENST00000552187 MLH3Q9UHC1 1453 aa13.71□□□□□ -0.21
TMEM106C-218ENST00000552187 MROH2AA6NES4 1674 aa13.71□□□□□ -0.21
TMEM106C-218ENST00000552187 CDK13Q14004 1512 aaKnown RBP13.7□□□□□ -0.22
TMEM106C-218ENST00000552187 MYO5CQ9NQX4 1742 aa13.7□□□□□ -0.22
TMEM106C-218ENST00000552187 ARHGAP5Q13017 1502 aa13.69□□□□□ -0.22
TMEM106C-218ENST00000552187 VWDEQ8N2E2 1590 aa13.66□□□□□ -0.22
TMEM106C-218ENST00000552187 NEURL4Q96JN8 1562 aa13.66□□□□□ -0.22
TMEM106C-218ENST00000552187 UPF1Q92900 1129 aaKnown RBP eCLIP13.66□□□□□ -0.22
TMEM106C-218ENST00000552187 A2ML1A8K2U0 1454 aa13.64□□□□□ -0.23
TMEM106C-218ENST00000552187 POLR1AO95602 1720 aaPredicted RBP13.63□□□□□ -0.23
TMEM106C-218ENST00000552187 DNMT1P26358 1616 aaKnown RBP13.63□□□□□ -0.23
TMEM106C-218ENST00000552187 CLTCQ00610 1675 aaKnown RBP13.63□□□□□ -0.23
TMEM106C-218ENST00000552187 RNF17Q9BXT8 1623 aaKnown RBP13.61□□□□□ -0.23
TMEM106C-218ENST00000552187 POTEDQ86YR6 584 aa13.61□□□□□ -0.23
TMEM106C-218ENST00000552187 KIF14Q15058 1648 aa13.61□□□□□ -0.23
TMEM106C-218ENST00000552187 KIDINS220Q9ULH0 1771 aa13.6□□□□□ -0.23
TMEM106C-218ENST00000552187 LRRC7Q96NW7 1537 aa13.6□□□□□ -0.23
TMEM106C-218ENST00000552187 ANKLE2Q86XL3 938 aa13.58□□□□□ -0.24
TMEM106C-218ENST00000552187 NPHP4O75161 1426 aaPredicted RBP13.57□□□□□ -0.24
TMEM106C-218ENST00000552187 GGT6Q6P531 493 aa13.57□□□□□ -0.24
TMEM106C-218ENST00000552187 ATP1B4Q9UN42 357 aaPredicted RBP13.57□□□□□ -0.24
TMEM106C-218ENST00000552187 ABCC1P33527 1531 aa13.57□□□□□ -0.24
TMEM106C-218ENST00000552187 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.57□□□□□ -0.24
TMEM106C-218ENST00000552187 ITSN2Q9NZM3 1697 aa13.54□□□□□ -0.24
TMEM106C-218ENST00000552187 STRCP1A6NGW2 1772 aa13.54□□□□□ -0.24
TMEM106C-218ENST00000552187 TRIM52Q96A61 297 aa13.54□□□□□ -0.24
TMEM106C-218ENST00000552187 SLC4A1APQ9BWU0 796 aaKnown RBP13.54□□□□□ -0.24
TMEM106C-218ENST00000552187 CDK11AQ9UQ88 783 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms