RNA–Protein interactions for RNA: ENST00000551705.1

TMEM106C-217, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 666 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-217ENST00000551705 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.18■■□□□ 1.3
TMEM106C-217ENST00000551705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.15■■□□□ 1.3
TMEM106C-217ENST00000551705 HNRNPUL2Q1KMD3 747 aaKnown RBP23.15■■□□□ 1.3
TMEM106C-217ENST00000551705 MAGI2Q86UL8 1455 aa23.13■■□□□ 1.29
TMEM106C-217ENST00000551705 FAM9AQ8IZU1 332 aaPredicted RBP23.09■■□□□ 1.29
TMEM106C-217ENST00000551705 LTBP4Q8N2S1 1624 aa23.08■■□□□ 1.29
TMEM106C-217ENST00000551705 CEBPAP49715 358 aaPredicted RBP23.07■■□□□ 1.28
TMEM106C-217ENST00000551705 UHRF1BP1Q6BDS2 1440 aa23.06■■□□□ 1.28
TMEM106C-217ENST00000551705 SETD1BQ9UPS6 1966 aaKnown RBP23.05■■□□□ 1.28
TMEM106C-217ENST00000551705 C3P01024 1663 aa23.04■■□□□ 1.28
TMEM106C-217ENST00000551705 C9orf84Q5VXU9 1444 aa23.04■■□□□ 1.28
TMEM106C-217ENST00000551705 DMRT2Q9Y5R5 561 aa23.03■■□□□ 1.28
TMEM106C-217ENST00000551705 ATP10AO60312 1499 aa23.02■■□□□ 1.28
TMEM106C-217ENST00000551705 PTPRTO14522 1441 aa23.01■■□□□ 1.27
TMEM106C-217ENST00000551705 SCAPERQ9BY12 1400 aa22.99■■□□□ 1.27
TMEM106C-217ENST00000551705 IQSEC2Q5JU85 1478 aa22.98■■□□□ 1.27
TMEM106C-217ENST00000551705 MYO5CQ9NQX4 1742 aa22.98■■□□□ 1.27
TMEM106C-217ENST00000551705 PLEKHD1A6NEE1 506 aa22.96■■□□□ 1.27
TMEM106C-217ENST00000551705 CDK13Q14004 1512 aaKnown RBP22.96■■□□□ 1.27
TMEM106C-217ENST00000551705 DIP2CQ9Y2E4 1556 aa22.93■■□□□ 1.26
TMEM106C-217ENST00000551705 PLCH2O75038 1416 aa22.91■■□□□ 1.26
TMEM106C-217ENST00000551705 KDM5CP41229 1560 aa22.9■■□□□ 1.26
TMEM106C-217ENST00000551705 ABCA6Q8N139 1617 aa22.9■■□□□ 1.26
TMEM106C-217ENST00000551705 NCOA1Q15788 1441 aa22.89■■□□□ 1.25
TMEM106C-217ENST00000551705 PHF23Q9BUL5 403 aaPredicted RBP22.88■■□□□ 1.25
TMEM106C-217ENST00000551705 RANGAP1P46060 587 aaPredicted RBP22.87■■□□□ 1.25
TMEM106C-217ENST00000551705 REREQ9P2R6 1566 aa22.87■■□□□ 1.25
TMEM106C-217ENST00000551705 KIF14Q15058 1648 aa22.86■■□□□ 1.25
TMEM106C-217ENST00000551705 ZNF518AQ6AHZ1 1483 aa22.84■■□□□ 1.25
TMEM106C-217ENST00000551705 CAMSAP1Q5T5Y3 1602 aa22.82■■□□□ 1.24
TMEM106C-217ENST00000551705 MED1Q15648 1581 aaPredicted RBP22.82■■□□□ 1.24
TMEM106C-217ENST00000551705 TRAPPC8Q9Y2L5 1435 aa22.78■■□□□ 1.24
TMEM106C-217ENST00000551705 SUPT6HQ7KZ85 1726 aaKnown RBP22.77■■□□□ 1.24
TMEM106C-217ENST00000551705 ARHGAP5Q13017 1502 aa22.77■■□□□ 1.24
TMEM106C-217ENST00000551705 UBAP1LF5GYI3 381 aa22.76■■□□□ 1.23
TMEM106C-217ENST00000551705 AGLP35573 1532 aa22.75■■□□□ 1.23
TMEM106C-217ENST00000551705 ZNF335Q9H4Z2 1342 aaPredicted RBP22.75■■□□□ 1.23
TMEM106C-217ENST00000551705 MROH2AA6NES4 1674 aa22.74■■□□□ 1.23
TMEM106C-217ENST00000551705 CDC42BPBQ9Y5S2 1711 aa22.74■■□□□ 1.23
TMEM106C-217ENST00000551705 AFAP1Q8N556 730 aa22.74■■□□□ 1.23
TMEM106C-217ENST00000551705 ZNF142P52746 1687 aaPredicted RBP22.74■■□□□ 1.23
TMEM106C-217ENST00000551705 EFCAB2Q5VUJ9 269 aa22.73■■□□□ 1.23
TMEM106C-217ENST00000551705 MYO3AQ8NEV4 1616 aa22.72■■□□□ 1.23
TMEM106C-217ENST00000551705 ITSN2Q9NZM3 1697 aa22.71■■□□□ 1.23
TMEM106C-217ENST00000551705 KIDINS220Q9ULH0 1771 aa22.71■■□□□ 1.23
TMEM106C-217ENST00000551705 LRRIQ1Q96JM4 1722 aa22.7■■□□□ 1.22
TMEM106C-217ENST00000551705 MLH3Q9UHC1 1453 aa22.69■■□□□ 1.22
TMEM106C-217ENST00000551705 CSRNP3Q8WYN3 585 aa22.69■■□□□ 1.22
TMEM106C-217ENST00000551705 MYT1LQ9UL68 1186 aa22.68■■□□□ 1.22
TMEM106C-217ENST00000551705 ABCC1P33527 1531 aa22.67■■□□□ 1.22
TMEM106C-217ENST00000551705 NCKAP5LQ9HCH0 1330 aa22.66■■□□□ 1.22
TMEM106C-217ENST00000551705 PREX2Q70Z35 1606 aa22.66■■□□□ 1.22
TMEM106C-217ENST00000551705 CNTLNQ9NXG0 1405 aa22.65■■□□□ 1.22
TMEM106C-217ENST00000551705 ESF1Q9H501 851 aaKnown RBP22.65■■□□□ 1.22
TMEM106C-217ENST00000551705 NPATQ14207 1427 aa22.65■■□□□ 1.22
TMEM106C-217ENST00000551705 CLTCQ00610 1675 aaKnown RBP22.64■■□□□ 1.21
TMEM106C-217ENST00000551705 CEP170BQ9Y4F5 1589 aaPredicted RBP22.63■■□□□ 1.21
TMEM106C-217ENST00000551705 PLA2R1Q13018 1463 aa22.61■■□□□ 1.21
TMEM106C-217ENST00000551705 TCOF1Q13428 1488 aaKnown RBP22.61■■□□□ 1.21
TMEM106C-217ENST00000551705 TROQ12816 1431 aaPredicted RBP22.6■■□□□ 1.21
TMEM106C-217ENST00000551705 HSPA1LP34931 641 aa22.6■■□□□ 1.21
TMEM106C-217ENST00000551705 POLR1AO95602 1720 aaPredicted RBP22.56■■□□□ 1.2
TMEM106C-217ENST00000551705 SCAF1Q9H7N4 1312 aaKnown RBP22.56■■□□□ 1.2
TMEM106C-217ENST00000551705 CDC42BPAQ5VT25 1732 aa22.55■■□□□ 1.2
TMEM106C-217ENST00000551705 ATP1B4Q9UN42 357 aaPredicted RBP22.55■■□□□ 1.2
TMEM106C-217ENST00000551705 ZMYM3Q14202 1370 aa22.53■■□□□ 1.2
TMEM106C-217ENST00000551705 CLIP1P30622 1438 aa22.53■■□□□ 1.2
TMEM106C-217ENST00000551705 SAMD9LQ8IVG5 1584 aa22.52■■□□□ 1.2
TMEM106C-217ENST00000551705 PIP4K2BP78356 416 aa22.52■■□□□ 1.2
TMEM106C-217ENST00000551705 FMN1Q68DA7 1419 aa22.5■■□□□ 1.19
TMEM106C-217ENST00000551705 PKD2Q13563 968 aa22.5■■□□□ 1.19
TMEM106C-217ENST00000551705 ALKQ9UM73 1620 aa22.49■■□□□ 1.19
TMEM106C-217ENST00000551705 EEA1Q15075 1411 aa22.49■■□□□ 1.19
TMEM106C-217ENST00000551705 PLXNC1O60486 1568 aa22.49■■□□□ 1.19
TMEM106C-217ENST00000551705 NEURL4Q96JN8 1562 aa22.49■■□□□ 1.19
TMEM106C-217ENST00000551705 PTPRKQ15262 1439 aa22.48■■□□□ 1.19
TMEM106C-217ENST00000551705 PPP6R1Q9UPN7 881 aa22.48■■□□□ 1.19
TMEM106C-217ENST00000551705 CDK11AQ9UQ88 783 aaPredicted RBP22.47■■□□□ 1.19
TMEM106C-217ENST00000551705 ARHGAP35Q9NRY4 1499 aa22.47■■□□□ 1.19
TMEM106C-217ENST00000551705 CPS1P31327 1500 aa22.47■■□□□ 1.19
TMEM106C-217ENST00000551705 DNMT1P26358 1616 aaKnown RBP22.46■■□□□ 1.19
TMEM106C-217ENST00000551705 SYCP2Q9BX26 1530 aa22.45■■□□□ 1.18
TMEM106C-217ENST00000551705 INO80Q9ULG1 1556 aaPredicted RBP22.43■■□□□ 1.18
TMEM106C-217ENST00000551705 ATP7AQ04656 1500 aa22.41■■□□□ 1.18
TMEM106C-217ENST00000551705 VWDEQ8N2E2 1590 aa22.4■■□□□ 1.18
TMEM106C-217ENST00000551705 A2ML1A8K2U0 1454 aa22.4■■□□□ 1.18
TMEM106C-217ENST00000551705 SHANK2Q9UPX8 1470 aa22.4■■□□□ 1.18
TMEM106C-217ENST00000551705 TOM1O60784 492 aa22.38■■□□□ 1.17
TMEM106C-217ENST00000551705 STRCP1A6NGW2 1772 aa22.35■■□□□ 1.17
TMEM106C-217ENST00000551705 A2MP01023 1474 aa22.34■■□□□ 1.17
TMEM106C-217ENST00000551705 ADGBQ8N7X0 1667 aa22.33■■□□□ 1.17
TMEM106C-217ENST00000551705 SPAG9O60271 1321 aaKnown RBP22.31■■□□□ 1.16
TMEM106C-217ENST00000551705 EHMT2Q96KQ7 1210 aa22.3■■□□□ 1.16
TMEM106C-217ENST00000551705 RNF17Q9BXT8 1623 aaKnown RBP22.3■■□□□ 1.16
TMEM106C-217ENST00000551705 CCDC18Q5T9S5 1454 aa22.29■■□□□ 1.16
TMEM106C-217ENST00000551705 GGT6Q6P531 493 aa22.28■■□□□ 1.16
TMEM106C-217ENST00000551705 ZNF777Q9ULD5 760 aaPredicted RBP22.28■■□□□ 1.16
TMEM106C-217ENST00000551705 IQGAP1P46940 1657 aa22.26■■□□□ 1.15
TMEM106C-217ENST00000551705 SYNMO15061 1565 aa22.25■■□□□ 1.15
TMEM106C-217ENST00000551705 DEPDC5O75140 1603 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms