RNA–Protein interactions for RNA: ENST00000551457.1

TMCC3-203, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

TSL 1 (best) BASIC

Gene TMCC3, Length 4,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-203ENST00000551457 FGD5Q6ZNL6 1462 aa10.72□□□□□ -0.69
TMCC3-203ENST00000551457 RSPH4AQ5TD94 716 aa10.72□□□□□ -0.69
TMCC3-203ENST00000551457 NLRP13Q86W25 1043 aa10.71□□□□□ -0.69
TMCC3-203ENST00000551457 DEKP35659 375 aaKnown RBP10.71□□□□□ -0.7
TMCC3-203ENST00000551457 GLIPR1L2Q4G1C9 344 aa10.71□□□□□ -0.7
TMCC3-203ENST00000551457 LAS1LQ9Y4W2 734 aaKnown RBP10.7□□□□□ -0.7
TMCC3-203ENST00000551457 ERCC6Q03468 1493 aa10.7□□□□□ -0.7
TMCC3-203ENST00000551457 CASKIN1Q8WXD9 1431 aa10.69□□□□□ -0.7
TMCC3-203ENST00000551457 ARID4BQ4LE39 1312 aaPredicted RBP10.69□□□□□ -0.7
TMCC3-203ENST00000551457 RGS3P49796 1198 aa10.69□□□□□ -0.7
TMCC3-203ENST00000551457 CUX1P39880 1505 aa10.69□□□□□ -0.7
TMCC3-203ENST00000551457 MYOM3Q5VTT5 1437 aa10.69□□□□□ -0.7
TMCC3-203ENST00000551457 TOP2BQ02880 1626 aa10.69□□□□□ -0.7
TMCC3-203ENST00000551457 FANCIQ9NVI1 1328 aa10.69□□□□□ -0.7
TMCC3-203ENST00000551457 FTSJ3Q8IY81 847 aaKnown RBP10.68□□□□□ -0.7
TMCC3-203ENST00000551457 KANK1Q14678 1352 aa10.68□□□□□ -0.7
TMCC3-203ENST00000551457 KIF15Q9NS87 1388 aa10.68□□□□□ -0.7
TMCC3-203ENST00000551457 IPO9Q96P70 1041 aaKnown RBP10.68□□□□□ -0.7
TMCC3-203ENST00000551457 CHMP4BQ9H444 224 aaKnown RBP10.68□□□□□ -0.7
TMCC3-203ENST00000551457 CFTRP13569 1480 aa10.67□□□□□ -0.7
TMCC3-203ENST00000551457 GOLGA6L22H0YM25 854 aa10.67□□□□□ -0.7
TMCC3-203ENST00000551457 MYBBP1AQ9BQG0 1328 aaKnown RBP10.66□□□□□ -0.7
TMCC3-203ENST00000551457 MAPK8IP3Q9UPT6 1336 aa10.66□□□□□ -0.7
TMCC3-203ENST00000551457 FYCO1Q9BQS8 1478 aa10.65□□□□□ -0.7
TMCC3-203ENST00000551457 NEUROD2Q15784 382 aa10.65□□□□□ -0.71
TMCC3-203ENST00000551457 FRAT1Q92837 279 aaPredicted RBP10.64□□□□□ -0.71
TMCC3-203ENST00000551457 PNNQ9H307 717 aaKnown RBP10.64□□□□□ -0.71
TMCC3-203ENST00000551457 CCDC7Q96M83 1385 aa10.63□□□□□ -0.71
TMCC3-203ENST00000551457 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.63□□□□□ -0.71
TMCC3-203ENST00000551457 EFCAB2Q5VUJ9 269 aa10.63□□□□□ -0.71
TMCC3-203ENST00000551457 ARXQ96QS3 562 aa10.63□□□□□ -0.71
TMCC3-203ENST00000551457 GAPVD1Q14C86 1478 aa10.63□□□□□ -0.71
TMCC3-203ENST00000551457 USP47Q96K76 1375 aa10.63□□□□□ -0.71
TMCC3-203ENST00000551457 TRIM44Q96DX7 344 aaPredicted RBP10.63□□□□□ -0.71
TMCC3-203ENST00000551457 CNTLNQ9NXG0 1405 aa10.62□□□□□ -0.71
TMCC3-203ENST00000551457 EFCAB5A4FU69 1503 aa10.62□□□□□ -0.71
TMCC3-203ENST00000551457 ST20-MTHFSA0A0A6YYL1 179 aa10.61□□□□□ -0.71
TMCC3-203ENST00000551457 MORC1Q86VD1 984 aa10.61□□□□□ -0.71
TMCC3-203ENST00000551457 NCOA2Q15596 1464 aa10.61□□□□□ -0.71
TMCC3-203ENST00000551457 GOLGA2Q08379 1002 aa10.61□□□□□ -0.71
TMCC3-203ENST00000551457 HMGXB3Q12766 1538 aa10.6□□□□□ -0.71
TMCC3-203ENST00000551457 RAD54L2Q9Y4B4 1467 aa10.6□□□□□ -0.71
TMCC3-203ENST00000551457 TIAM1Q13009 1591 aa10.6□□□□□ -0.71
TMCC3-203ENST00000551457 JPH4Q96JJ6 628 aa10.6□□□□□ -0.71
TMCC3-203ENST00000551457 EIF3AQ14152 1382 aaKnown RBP10.6□□□□□ -0.71
TMCC3-203ENST00000551457 USP35Q9P2H5 1018 aa10.59□□□□□ -0.71
TMCC3-203ENST00000551457 HFM1A2PYH4 1435 aa10.58□□□□□ -0.72
TMCC3-203ENST00000551457 KIF7Q2M1P5 1343 aa10.58□□□□□ -0.72
TMCC3-203ENST00000551457 WASHC2AQ641Q2 1341 aa10.58□□□□□ -0.72
TMCC3-203ENST00000551457 HNRNPMP52272 730 aaKnown RBP eCLIP10.58□□□□□ -0.72
TMCC3-203ENST00000551457 CASC1Q6TDU7 716 aa10.58□□□□□ -0.72
TMCC3-203ENST00000551457 CCDC144AA2RUR9 1427 aa10.58□□□□□ -0.72
TMCC3-203ENST00000551457 L1TD1Q5T7N2 865 aaKnown RBP10.58□□□□□ -0.72
TMCC3-203ENST00000551457 POGKQ9P215 609 aa10.58□□□□□ -0.72
TMCC3-203ENST00000551457 TNNT2P45379 298 aaPredicted RBP10.57□□□□□ -0.72
TMCC3-203ENST00000551457 RRP1P56182 461 aaKnown RBP10.57□□□□□ -0.72
TMCC3-203ENST00000551457 MAP3K1Q13233 1512 aa10.57□□□□□ -0.72
TMCC3-203ENST00000551457 U2SURPO15042 1029 aaKnown RBP10.56□□□□□ -0.72
TMCC3-203ENST00000551457 NCLP19338 710 aaKnown RBP10.56□□□□□ -0.72
TMCC3-203ENST00000551457 CFAP44Q96MT7 982 aa10.56□□□□□ -0.72
TMCC3-203ENST00000551457 RWDD1Q9H446 243 aaPredicted RBP10.56□□□□□ -0.72
TMCC3-203ENST00000551457 MIA2Q96PC5 1412 aa10.55□□□□□ -0.72
TMCC3-203ENST00000551457 IPO8O15397 1037 aaKnown RBP10.55□□□□□ -0.72
TMCC3-203ENST00000551457 HSCBQ8IWL3 235 aa10.55□□□□□ -0.72
TMCC3-203ENST00000551457 NGEFQ8N5V2 710 aa10.55□□□□□ -0.72
TMCC3-203ENST00000551457 PMFBP1Q8TBY8 1022 aa10.55□□□□□ -0.72
TMCC3-203ENST00000551457 PDE4AP27815 886 aa10.54□□□□□ -0.72
TMCC3-203ENST00000551457 CENPQQ7L2Z9 268 aaPredicted RBP10.54□□□□□ -0.72
TMCC3-203ENST00000551457 HAP1P54257 671 aaPredicted RBP10.54□□□□□ -0.72
TMCC3-203ENST00000551457 PANK3Q9H999 370 aa10.54□□□□□ -0.72
TMCC3-203ENST00000551457 HSP90AB1P08238 724 aaKnown RBP10.53□□□□□ -0.72
TMCC3-203ENST00000551457 PEG3Q9GZU2 1588 aa10.53□□□□□ -0.72
TMCC3-203ENST00000551457 EHBP1L1Q8N3D4 1523 aa10.52□□□□□ -0.73
TMCC3-203ENST00000551457 STAC3Q96MF2 364 aa10.52□□□□□ -0.73
TMCC3-203ENST00000551457 EXOC6Q8TAG9 804 aa10.52□□□□□ -0.73
TMCC3-203ENST00000551457 RTN4Q9NQC3 1192 aaKnown RBP10.52□□□□□ -0.73
TMCC3-203ENST00000551457 SPAG9O60271 1321 aaKnown RBP10.51□□□□□ -0.73
TMCC3-203ENST00000551457 BRD4O60885 1362 aaPredicted RBP10.51□□□□□ -0.73
TMCC3-203ENST00000551457 WDR97A6NE52 1622 aa10.51□□□□□ -0.73
TMCC3-203ENST00000551457 CENPJQ9HC77 1338 aaPredicted RBP10.51□□□□□ -0.73
TMCC3-203ENST00000551457 SRPK2P78362 688 aaKnown RBP10.5□□□□□ -0.73
TMCC3-203ENST00000551457 ANKRD50Q9ULJ7 1429 aa10.5□□□□□ -0.73
TMCC3-203ENST00000551457 U2AF1L5P0DN76 240 aaPredicted RBP10.5□□□□□ -0.73
TMCC3-203ENST00000551457 U2AF1Q01081 240 aaKnown RBP eCLIP10.5□□□□□ -0.73
TMCC3-203ENST00000551457 CALD1Q05682 793 aaKnown RBP10.5□□□□□ -0.73
TMCC3-203ENST00000551457 AQRO60306 1485 aaKnown RBP eCLIP10.5□□□□□ -0.73
TMCC3-203ENST00000551457 FAM161AQ3B820 660 aa10.5□□□□□ -0.73
TMCC3-203ENST00000551457 PTMSP20962 102 aa10.49□□□□□ -0.73
TMCC3-203ENST00000551457 ZNF644Q9H582 1327 aaPredicted RBP10.49□□□□□ -0.73
TMCC3-203ENST00000551457 E9PSI1 815 aa10.49□□□□□ -0.73
TMCC3-203ENST00000551457 PTPRGP23470 1445 aa10.48□□□□□ -0.73
TMCC3-203ENST00000551457 KIF3BO15066 747 aa10.48□□□□□ -0.73
TMCC3-203ENST00000551457 CGNL1Q0VF96 1302 aa10.48□□□□□ -0.73
TMCC3-203ENST00000551457 HDGFL2Q7Z4V5 671 aaPredicted RBP10.48□□□□□ -0.73
TMCC3-203ENST00000551457 WASHC2CQ9Y4E1 1318 aa10.48□□□□□ -0.73
TMCC3-203ENST00000551457 NAIPQ13075 1403 aa10.47□□□□□ -0.73
TMCC3-203ENST00000551457 CRBNQ96SW2 442 aa10.47□□□□□ -0.73
TMCC3-203ENST00000551457 BICRAQ9NZM4 1560 aa10.47□□□□□ -0.73
TMCC3-203ENST00000551457 SENP3Q9H4L4 574 aaPredicted RBP10.47□□□□□ -0.73
TMCC3-203ENST00000551457 TOPBP1Q92547 1522 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms