RNA–Protein interactions for RNA: ENST00000550889.5

ATXN2-222, Transcript of ataxin 2, humanhuman

TSL 2

Gene ATXN2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-222ENST00000550889 CFTRP13569 1480 aa8.34□□□□□ -1.07
ATXN2-222ENST00000550889 PDS5BQ9NTI5 1447 aa8.33□□□□□ -1.08
ATXN2-222ENST00000550889 NLRP6P59044 892 aa8.33□□□□□ -1.08
ATXN2-222ENST00000550889 MFRPQ9BY79 579 aa8.33□□□□□ -1.08
ATXN2-222ENST00000550889 NKX1-1Q15270 411 aaPredicted RBP8.32□□□□□ -1.08
ATXN2-222ENST00000550889 PDCD7Q8N8D1 485 aaKnown RBP8.32□□□□□ -1.08
ATXN2-222ENST00000550889 DPY19L2Q6NUT2 758 aa8.32□□□□□ -1.08
ATXN2-222ENST00000550889 BBXQ8WY36 941 aaPredicted RBP8.31□□□□□ -1.08
ATXN2-222ENST00000550889 POTEB2H3BUK9 544 aa8.3□□□□□ -1.08
ATXN2-222ENST00000550889 ERCC6Q03468 1493 aa8.3□□□□□ -1.08
ATXN2-222ENST00000550889 ILDR1Q86SU0 546 aaPredicted RBP8.29□□□□□ -1.08
ATXN2-222ENST00000550889 FBXO22Q8NEZ5 403 aa8.29□□□□□ -1.08
ATXN2-222ENST00000550889 MS4A4AQ96JQ5 239 aa8.29□□□□□ -1.08
ATXN2-222ENST00000550889 LHX8Q68G74 356 aa8.28□□□□□ -1.08
ATXN2-222ENST00000550889 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.28□□□□□ -1.08
ATXN2-222ENST00000550889 G3V3G9 751 aa8.26□□□□□ -1.09
ATXN2-222ENST00000550889 POTEJP0CG39 1038 aa8.25□□□□□ -1.09
ATXN2-222ENST00000550889 L3MBTL3Q96JM7 780 aaPredicted RBP8.25□□□□□ -1.09
ATXN2-222ENST00000550889 FANCD2Q9BXW9 1451 aa8.25□□□□□ -1.09
ATXN2-222ENST00000550889 RYDENQ9NUL5 291 aaKnown RBP8.24□□□□□ -1.09
ATXN2-222ENST00000550889 GTPBP6O43824 516 aaPredicted RBP8.23□□□□□ -1.09
ATXN2-222ENST00000550889 CFAP44Q96MT7 982 aa8.23□□□□□ -1.09
ATXN2-222ENST00000550889 BOLA1Q9Y3E2 137 aa8.23□□□□□ -1.09
ATXN2-222ENST00000550889 CUX2O14529 1486 aa8.23□□□□□ -1.09
ATXN2-222ENST00000550889 CEP164Q9UPV0 1460 aa8.23□□□□□ -1.09
ATXN2-222ENST00000550889 PPP1R37O75864 691 aa8.23□□□□□ -1.09
ATXN2-222ENST00000550889 PAXIP1Q6ZW49 1069 aaPredicted RBP8.23□□□□□ -1.09
ATXN2-222ENST00000550889 SPRYD3Q8NCJ5 442 aa8.21□□□□□ -1.09
ATXN2-222ENST00000550889 MRC2Q9UBG0 1479 aa8.21□□□□□ -1.1
ATXN2-222ENST00000550889 MICALL2Q8IY33 904 aa8.2□□□□□ -1.1
ATXN2-222ENST00000550889 SCUBE2Q9NQ36 999 aa8.2□□□□□ -1.1
ATXN2-222ENST00000550889 C3orf67Q6ZVT6 689 aa8.2□□□□□ -1.1
ATXN2-222ENST00000550889 THOC2Q8NI27 1593 aaKnown RBP8.19□□□□□ -1.1
ATXN2-222ENST00000550889 MAMSTRQ6ZN01 415 aa8.19□□□□□ -1.1
ATXN2-222ENST00000550889 KIF21AQ7Z4S6 1674 aa8.19□□□□□ -1.1
ATXN2-222ENST00000550889 WDR62O43379 1518 aa8.18□□□□□ -1.1
ATXN2-222ENST00000550889 OTUD5Q96G74 571 aa8.17□□□□□ -1.1
ATXN2-222ENST00000550889 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.17□□□□□ -1.1
ATXN2-222ENST00000550889 TMEM121BQ9BXQ6 578 aaPredicted RBP8.16□□□□□ -1.1
ATXN2-222ENST00000550889 ABCC8Q09428 1581 aa8.16□□□□□ -1.1
ATXN2-222ENST00000550889 URB2Q14146 1524 aaKnown RBP8.15□□□□□ -1.1
ATXN2-222ENST00000550889 PRDM2Q13029 1718 aa8.15□□□□□ -1.11
ATXN2-222ENST00000550889 SLAIN1Q8ND83 568 aa8.14□□□□□ -1.11
ATXN2-222ENST00000550889 TOPBP1Q92547 1522 aa8.11□□□□□ -1.11
ATXN2-222ENST00000550889 PLCB2Q00722 1185 aa8.1□□□□□ -1.11
ATXN2-222ENST00000550889 DNMBPQ6XZF7 1577 aa8.1□□□□□ -1.11
ATXN2-222ENST00000550889 TMEM92Q6UXU6 159 aa8.09□□□□□ -1.11
ATXN2-222ENST00000550889 TMC2Q8TDI7 906 aa8.07□□□□□ -1.12
ATXN2-222ENST00000550889 IFT140Q96RY7 1462 aa8.07□□□□□ -1.12
ATXN2-222ENST00000550889 CUX1P39880 1505 aa8.06□□□□□ -1.12
ATXN2-222ENST00000550889 POLA1P09884 1462 aaPredicted RBP8.06□□□□□ -1.12
ATXN2-222ENST00000550889 C2orf72A6NCS6 295 aa8.06□□□□□ -1.12
ATXN2-222ENST00000550889 CADPS2Q86UW7 1296 aa8.06□□□□□ -1.12
ATXN2-222ENST00000550889 WRNQ14191 1432 aaPredicted RBP eCLIP8.05□□□□□ -1.12
ATXN2-222ENST00000550889 TSHZ2Q9NRE2 1034 aa8.05□□□□□ -1.12
ATXN2-222ENST00000550889 SOGA1O94964 1423 aa8.04□□□□□ -1.12
ATXN2-222ENST00000550889 HAP1P54257 671 aaPredicted RBP8.03□□□□□ -1.12
ATXN2-222ENST00000550889 FGD5Q6ZNL6 1462 aa8.03□□□□□ -1.12
ATXN2-222ENST00000550889 KIF3CO14782 793 aa8.02□□□□□ -1.13
ATXN2-222ENST00000550889 NCKAP5LQ9HCH0 1330 aa8.02□□□□□ -1.13
ATXN2-222ENST00000550889 PDE4AP27815 886 aa8.01□□□□□ -1.13
ATXN2-222ENST00000550889 LARP6Q9BRS8 491 aaKnown RBP8.01□□□□□ -1.13
ATXN2-222ENST00000550889 CRISPLD2Q9H0B8 497 aa8.01□□□□□ -1.13
ATXN2-222ENST00000550889 GPHNQ9NQX3 736 aaPredicted RBP8.01□□□□□ -1.13
ATXN2-222ENST00000550889 RAD54L2Q9Y4B4 1467 aa8.01□□□□□ -1.13
ATXN2-222ENST00000550889 TOP2BQ02880 1626 aa8□□□□□ -1.13
ATXN2-222ENST00000550889 TARBP1Q13395 1621 aaKnown RBP8□□□□□ -1.13
ATXN2-222ENST00000550889 ZNF608Q9ULD9 1512 aaPredicted RBP8□□□□□ -1.13
ATXN2-222ENST00000550889 ABCA10Q8WWZ4 1543 aa7.98□□□□□ -1.13
ATXN2-222ENST00000550889 DSG2Q14126 1118 aa7.98□□□□□ -1.13
ATXN2-222ENST00000550889 SYNJ1O43426 1573 aa7.98□□□□□ -1.13
ATXN2-222ENST00000550889 BIVM-ERCC5R4GMW8 1640 aa7.98□□□□□ -1.13
ATXN2-222ENST00000550889 TDRD9Q8NDG6 1382 aaKnown RBP7.98□□□□□ -1.13
ATXN2-222ENST00000550889 SNPHO15079 494 aa7.98□□□□□ -1.13
ATXN2-222ENST00000550889 DDX27Q96GQ7 796 aaKnown RBP7.98□□□□□ -1.13
ATXN2-222ENST00000550889 WDR97A6NE52 1622 aa7.97□□□□□ -1.13
ATXN2-222ENST00000550889 AQRO60306 1485 aaKnown RBP eCLIP7.97□□□□□ -1.132e-6■■■■■ 27.1
ATXN2-222ENST00000550889 FOXK1P85037 733 aa7.97□□□□□ -1.13
ATXN2-222ENST00000550889 PPP1R15BQ5SWA1 713 aa7.97□□□□□ -1.13
ATXN2-222ENST00000550889 PLPP6Q8IY26 295 aa7.97□□□□□ -1.13
ATXN2-222ENST00000550889 FAM163AQ96GL9 167 aaPredicted RBP7.96□□□□□ -1.14
ATXN2-222ENST00000550889 HOXB3P14651 431 aaPredicted RBP7.95□□□□□ -1.14
ATXN2-222ENST00000550889 DOK7Q18PE1 504 aa7.95□□□□□ -1.14
ATXN2-222ENST00000550889 EIF4G3O43432 1585 aaKnown RBP7.94□□□□□ -1.14
ATXN2-222ENST00000550889 MFSD10Q14728 455 aa7.94□□□□□ -1.14
ATXN2-222ENST00000550889 ZNF710Q8N1W2 664 aa7.94□□□□□ -1.14
ATXN2-222ENST00000550889 WDR70Q9NW82 654 aa7.94□□□□□ -1.14
ATXN2-222ENST00000550889 GRIN2BQ13224 1484 aa7.94□□□□□ -1.14
ATXN2-222ENST00000550889 GAPVD1Q14C86 1478 aa7.94□□□□□ -1.14
ATXN2-222ENST00000550889 RIMBP2O15034 1052 aa7.92□□□□□ -1.14
ATXN2-222ENST00000550889 MAGI1Q96QZ7 1491 aaPredicted RBP7.91□□□□□ -1.14
ATXN2-222ENST00000550889 ABCA5Q8WWZ7 1642 aa7.9□□□□□ -1.14
ATXN2-222ENST00000550889 ST18O60284 1047 aa7.9□□□□□ -1.14
ATXN2-222ENST00000550889 UPF1Q92900 1129 aaKnown RBP eCLIP7.9□□□□□ -1.14
ATXN2-222ENST00000550889 KIF27Q86VH2 1401 aa7.9□□□□□ -1.15
ATXN2-222ENST00000550889 SNAPC4Q5SXM2 1469 aa7.89□□□□□ -1.15
ATXN2-222ENST00000550889 CHMP7Q8WUX9 453 aaPredicted RBP7.89□□□□□ -1.15
ATXN2-222ENST00000550889 ERICH3Q5RHP9 1530 aa7.89□□□□□ -1.15
ATXN2-222ENST00000550889 SYNJ2O15056 1496 aa7.88□□□□□ -1.15
ATXN2-222ENST00000550889 IGF1RP08069 1367 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms