RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 YTHDC1Q96MU7 727 aaKnown RBP12.68□□□□□ -0.38
TMEM116-209ENST00000550020 KIF14Q15058 1648 aa12.68□□□□□ -0.38
TMEM116-209ENST00000550020 PRG4Q92954 1404 aaPredicted RBP12.68□□□□□ -0.38
TMEM116-209ENST00000550020 CAMSAP2Q08AD1 1489 aa12.67□□□□□ -0.38
TMEM116-209ENST00000550020 MPHOSPH9Q99550 1183 aa12.67□□□□□ -0.38
TMEM116-209ENST00000550020 PTPRGP23470 1445 aa12.67□□□□□ -0.38
TMEM116-209ENST00000550020 ANKRD30AQ9BXX3 1397 aa12.67□□□□□ -0.38
TMEM116-209ENST00000550020 GPATCH8Q9UKJ3 1502 aaKnown RBP12.67□□□□□ -0.38
TMEM116-209ENST00000550020 ADGRL2O95490 1459 aa12.65□□□□□ -0.38
TMEM116-209ENST00000550020 GTF3C3Q9Y5Q9 886 aa12.65□□□□□ -0.38
TMEM116-209ENST00000550020 PELP1Q8IZL8 1130 aaKnown RBP12.64□□□□□ -0.39
TMEM116-209ENST00000550020 SHANK2Q9UPX8 1470 aa12.64□□□□□ -0.39
TMEM116-209ENST00000550020 ADGBQ8N7X0 1667 aa12.64□□□□□ -0.39
TMEM116-209ENST00000550020 RSPH4AQ5TD94 716 aa12.63□□□□□ -0.39
TMEM116-209ENST00000550020 ATP10BO94823 1461 aa12.63□□□□□ -0.39
TMEM116-209ENST00000550020 NCOA1Q15788 1441 aa12.62□□□□□ -0.39
TMEM116-209ENST00000550020 ABCC10Q5T3U5 1492 aa12.6□□□□□ -0.39
TMEM116-209ENST00000550020 ANP32CO43423 234 aa12.6□□□□□ -0.39
TMEM116-209ENST00000550020 TSPY4P0CV99 314 aa12.6□□□□□ -0.39
TMEM116-209ENST00000550020 TSPY10P0CW01 314 aa12.6□□□□□ -0.39
TMEM116-209ENST00000550020 SLC4A1APQ9BWU0 796 aaKnown RBP12.6□□□□□ -0.39
TMEM116-209ENST00000550020 ZNF644Q9H582 1327 aaPredicted RBP12.6□□□□□ -0.39
TMEM116-209ENST00000550020 CROCC2H7BZ55 1655 aa12.59□□□□□ -0.39
TMEM116-209ENST00000550020 CCER2I3L3R5 266 aa12.59□□□□□ -0.39
TMEM116-209ENST00000550020 ZNF777Q9ULD5 760 aaPredicted RBP12.59□□□□□ -0.39
TMEM116-209ENST00000550020 RPRD2Q5VT52 1461 aaKnown RBP12.59□□□□□ -0.39
TMEM116-209ENST00000550020 SHROOM2Q13796 1616 aa12.59□□□□□ -0.39
TMEM116-209ENST00000550020 DDX10Q13206 875 aaKnown RBP12.58□□□□□ -0.4
TMEM116-209ENST00000550020 ANKRD30BQ9BXX2 1392 aa12.57□□□□□ -0.4
TMEM116-209ENST00000550020 ARHGEF5Q12774 1597 aa12.57□□□□□ -0.4
TMEM116-209ENST00000550020 EIF4G2P78344 907 aaKnown RBP eCLIP12.57□□□□□ -0.4
TMEM116-209ENST00000550020 KDM6BO15054 1643 aa12.57□□□□□ -0.4
TMEM116-209ENST00000550020 DENND4BO75064 1496 aaPredicted RBP12.56□□□□□ -0.4
TMEM116-209ENST00000550020 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
TMEM116-209ENST00000550020 ANKRD50Q9ULJ7 1429 aa12.55□□□□□ -0.4
TMEM116-209ENST00000550020 KIAA1107Q9UPP5 1409 aa12.55□□□□□ -0.4
TMEM116-209ENST00000550020 PLEKHH2Q8IVE3 1493 aa12.55□□□□□ -0.4
TMEM116-209ENST00000550020 CHD1O14646 1710 aa12.55□□□□□ -0.4
TMEM116-209ENST00000550020 KDM5BQ9UGL1 1544 aa12.55□□□□□ -0.4
TMEM116-209ENST00000550020 CDC42BPAQ5VT25 1732 aa12.53□□□□□ -0.4
TMEM116-209ENST00000550020 ABCC2Q92887 1545 aa12.52□□□□□ -0.4
TMEM116-209ENST00000550020 L3MBTL2Q969R5 705 aa12.52□□□□□ -0.41
TMEM116-209ENST00000550020 PZPP20742 1482 aa12.52□□□□□ -0.41
TMEM116-209ENST00000550020 CCDC141Q6ZP82 1450 aa12.52□□□□□ -0.41
TMEM116-209ENST00000550020 UHRF1BP1LA0JNW5 1464 aa12.51□□□□□ -0.41
TMEM116-209ENST00000550020 KDM5DQ9BY66 1539 aa12.51□□□□□ -0.41
TMEM116-209ENST00000550020 PREX2Q70Z35 1606 aa12.51□□□□□ -0.41
TMEM116-209ENST00000550020 TEX14Q8IWB6 1497 aa12.49□□□□□ -0.41
TMEM116-209ENST00000550020 HSPA5P11021 654 aaKnown RBP12.49□□□□□ -0.41
TMEM116-209ENST00000550020 KIF15Q9NS87 1388 aa12.48□□□□□ -0.41
TMEM116-209ENST00000550020 MAST1Q9Y2H9 1570 aa12.47□□□□□ -0.41
TMEM116-209ENST00000550020 MBD5Q9P267 1494 aa12.47□□□□□ -0.41
TMEM116-209ENST00000550020 NUP155O75694 1391 aa12.47□□□□□ -0.41
TMEM116-209ENST00000550020 ARHGAP5Q13017 1502 aa12.47□□□□□ -0.41
TMEM116-209ENST00000550020 CLASP1Q7Z460 1538 aa12.47□□□□□ -0.41
TMEM116-209ENST00000550020 PKD2Q13563 968 aa12.46□□□□□ -0.41
TMEM116-209ENST00000550020 FOXD1Q16676 465 aa12.45□□□□□ -0.42
TMEM116-209ENST00000550020 ARHGEF12Q9NZN5 1544 aa12.45□□□□□ -0.42
TMEM116-209ENST00000550020 SAMD9LQ8IVG5 1584 aa12.44□□□□□ -0.42
TMEM116-209ENST00000550020 ARID4BQ4LE39 1312 aaPredicted RBP12.44□□□□□ -0.42
TMEM116-209ENST00000550020 HNRNPMP52272 730 aaKnown RBP eCLIP12.44□□□□□ -0.42
TMEM116-209ENST00000550020 HIRIP3Q9BW71 556 aaPredicted RBP12.44□□□□□ -0.42
TMEM116-209ENST00000550020 EFCAB2Q5VUJ9 269 aa12.43□□□□□ -0.42
TMEM116-209ENST00000550020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.42□□□□□ -0.42
TMEM116-209ENST00000550020 CNTLNQ9NXG0 1405 aa12.42□□□□□ -0.42
TMEM116-209ENST00000550020 MYO5CQ9NQX4 1742 aa12.42□□□□□ -0.42
TMEM116-209ENST00000550020 PLXNC1O60486 1568 aa12.41□□□□□ -0.42
TMEM116-209ENST00000550020 PLCH2O75038 1416 aa12.41□□□□□ -0.42
TMEM116-209ENST00000550020 UHRF1BP1Q6BDS2 1440 aa12.41□□□□□ -0.42
TMEM116-209ENST00000550020 ARAP3Q8WWN8 1544 aa12.41□□□□□ -0.42
TMEM116-209ENST00000550020 CCDC7Q96M83 1385 aa12.41□□□□□ -0.42
TMEM116-209ENST00000550020 WASHC2AQ641Q2 1341 aa12.4□□□□□ -0.42
TMEM116-209ENST00000550020 CDC42BPBQ9Y5S2 1711 aa12.4□□□□□ -0.42
TMEM116-209ENST00000550020 SYCP2Q9BX26 1530 aa12.39□□□□□ -0.43
TMEM116-209ENST00000550020 DUOX2Q9NRD8 1548 aa12.39□□□□□ -0.43
TMEM116-209ENST00000550020 TTC37Q6PGP7 1564 aa12.39□□□□□ -0.43
TMEM116-209ENST00000550020 ERBINQ96RT1 1412 aa12.38□□□□□ -0.43
TMEM116-209ENST00000550020 NBPF8Q3BBV2 869 aa12.38□□□□□ -0.43
TMEM116-209ENST00000550020 SPATA31E1Q6ZUB1 1445 aa12.37□□□□□ -0.43
TMEM116-209ENST00000550020 ZCCHC11Q5TAX3 1644 aaKnown RBP12.37□□□□□ -0.43
TMEM116-209ENST00000550020 ROCK2O75116 1388 aaKnown RBP12.37□□□□□ -0.43
TMEM116-209ENST00000550020 UNC13BO14795 1591 aa12.37□□□□□ -0.43
TMEM116-209ENST00000550020 FAM135AQ9P2D6 1515 aa12.37□□□□□ -0.43
TMEM116-209ENST00000550020 RALGAPBQ86X10 1494 aa12.36□□□□□ -0.43
TMEM116-209ENST00000550020 ERCC6L2Q5T890 1561 aa12.35□□□□□ -0.43
TMEM116-209ENST00000550020 NEFLP07196 543 aa12.35□□□□□ -0.43
TMEM116-209ENST00000550020 CCDC144AA2RUR9 1427 aa12.35□□□□□ -0.43
TMEM116-209ENST00000550020 RTEL1-TNFRSF6BF6WH68 1400 aa12.35□□□□□ -0.43
TMEM116-209ENST00000550020 USP47Q96K76 1375 aa12.34□□□□□ -0.43
TMEM116-209ENST00000550020 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
TMEM116-209ENST00000550020 POLR1AO95602 1720 aaPredicted RBP12.33□□□□□ -0.44
TMEM116-209ENST00000550020 ABCC1P33527 1531 aa12.32□□□□□ -0.44
TMEM116-209ENST00000550020 KIF7Q2M1P5 1343 aa12.32□□□□□ -0.44
TMEM116-209ENST00000550020 IQGAP3Q86VI3 1631 aa12.31□□□□□ -0.44
TMEM116-209ENST00000550020 STAC3Q96MF2 364 aa12.31□□□□□ -0.44
TMEM116-209ENST00000550020 ATP10AO60312 1499 aa12.31□□□□□ -0.44
TMEM116-209ENST00000550020 MAGI2Q86UL8 1455 aa12.31□□□□□ -0.44
TMEM116-209ENST00000550020 WDR7Q9Y4E6 1490 aa12.31□□□□□ -0.44
TMEM116-209ENST00000550020 ZNF326Q5BKZ1 582 aaKnown RBP12.3□□□□□ -0.44
TMEM116-209ENST00000550020 CARD11Q9BXL7 1154 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms