RNA–Protein interactions for RNA: ENST00000549425.5

TMEM116-207, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 3

Gene TMEM116, Length 615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-207ENST00000549425 CFAP74Q9C0B2 1584 aa15.2■□□□□ 0.02
TMEM116-207ENST00000549425 CTTNBP2Q8WZ74 1663 aa15.2■□□□□ 0.02
TMEM116-207ENST00000549425 HSPA1LP34931 641 aa15.2■□□□□ 0.02
TMEM116-207ENST00000549425 MAGI2Q86UL8 1455 aa15.19■□□□□ 0.02
TMEM116-207ENST00000549425 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
TMEM116-207ENST00000549425 HECW1Q76N89 1606 aa15.17■□□□□ 0.02
TMEM116-207ENST00000549425 SUPT5HO00267 1087 aaKnown RBP15.16■□□□□ 0.02
TMEM116-207ENST00000549425 ZNF335Q9H4Z2 1342 aaPredicted RBP15.16■□□□□ 0.02
TMEM116-207ENST00000549425 C9orf84Q5VXU9 1444 aa15.14■□□□□ 0.01
TMEM116-207ENST00000549425 PIP4K2BP78356 416 aa15.13■□□□□ 0.01
TMEM116-207ENST00000549425 C3P01024 1663 aa15.12■□□□□ 0.01
TMEM116-207ENST00000549425 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.12■□□□□ 0.01
TMEM116-207ENST00000549425 HNRNPUL2Q1KMD3 747 aaKnown RBP15.12■□□□□ 0.01
TMEM116-207ENST00000549425 FAM9AQ8IZU1 332 aaPredicted RBP15.12■□□□□ 0.01
TMEM116-207ENST00000549425 ATP10AO60312 1499 aa15.11■□□□□ 0.01
TMEM116-207ENST00000549425 CAMSAP1Q5T5Y3 1602 aa15.1■□□□□ 0.01
TMEM116-207ENST00000549425 RAPGEF6Q8TEU7 1601 aa15.06■□□□□ 0
TMEM116-207ENST00000549425 TRAPPC8Q9Y2L5 1435 aa15.05■□□□□ -0
TMEM116-207ENST00000549425 NCKAP5LQ9HCH0 1330 aa15.04■□□□□ -0
TMEM116-207ENST00000549425 TOM1O60784 492 aa15.03■□□□□ -0
TMEM116-207ENST00000549425 CHIC1Q5VXU3 224 aa15.03■□□□□ -0
TMEM116-207ENST00000549425 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.02■□□□□ -0
TMEM116-207ENST00000549425 SCAPERQ9BY12 1400 aa15.02■□□□□ -0
TMEM116-207ENST00000549425 P3H3Q8IVL6 736 aa15.02■□□□□ -0
TMEM116-207ENST00000549425 ESF1Q9H501 851 aaKnown RBP15.01□□□□□ -0.01
TMEM116-207ENST00000549425 SUPT6HQ7KZ85 1726 aaKnown RBP14.98□□□□□ -0.01
TMEM116-207ENST00000549425 NUP153P49790 1475 aaKnown RBP14.97□□□□□ -0.01
TMEM116-207ENST00000549425 SENP3Q9H4L4 574 aaPredicted RBP14.97□□□□□ -0.01
TMEM116-207ENST00000549425 RGS17Q9UGC6 210 aaPredicted RBP14.96□□□□□ -0.01
TMEM116-207ENST00000549425 PLEKHD1A6NEE1 506 aa14.95□□□□□ -0.02
TMEM116-207ENST00000549425 PKD2Q13563 968 aa14.95□□□□□ -0.02
TMEM116-207ENST00000549425 PPP6R1Q9UPN7 881 aa14.95□□□□□ -0.02
TMEM116-207ENST00000549425 PLA2R1Q13018 1463 aa14.95□□□□□ -0.02
TMEM116-207ENST00000549425 DIP2CQ9Y2E4 1556 aa14.94□□□□□ -0.02
TMEM116-207ENST00000549425 CPS1P31327 1500 aa14.93□□□□□ -0.02
TMEM116-207ENST00000549425 MYT1LQ9UL68 1186 aa14.93□□□□□ -0.02
TMEM116-207ENST00000549425 SETD1AO15047 1707 aaKnown RBP14.92□□□□□ -0.02
TMEM116-207ENST00000549425 TCOF1Q13428 1488 aaKnown RBP14.92□□□□□ -0.02
TMEM116-207ENST00000549425 REREQ9P2R6 1566 aa14.92□□□□□ -0.02
TMEM116-207ENST00000549425 ZNF142P52746 1687 aaPredicted RBP14.92□□□□□ -0.02
TMEM116-207ENST00000549425 NPATQ14207 1427 aa14.92□□□□□ -0.02
TMEM116-207ENST00000549425 MYO3AQ8NEV4 1616 aa14.91□□□□□ -0.02
TMEM116-207ENST00000549425 AGLP35573 1532 aa14.91□□□□□ -0.02
TMEM116-207ENST00000549425 PTPRKQ15262 1439 aa14.91□□□□□ -0.02
TMEM116-207ENST00000549425 CNTLNQ9NXG0 1405 aa14.91□□□□□ -0.02
TMEM116-207ENST00000549425 ZNF518AQ6AHZ1 1483 aa14.9□□□□□ -0.02
TMEM116-207ENST00000549425 KDM5CP41229 1560 aa14.89□□□□□ -0.03
TMEM116-207ENST00000549425 SAMD9Q5K651 1589 aa14.89□□□□□ -0.03
TMEM116-207ENST00000549425 ABCA6Q8N139 1617 aa14.88□□□□□ -0.03
TMEM116-207ENST00000549425 ALKQ9UM73 1620 aa14.88□□□□□ -0.03
TMEM116-207ENST00000549425 PLCH2O75038 1416 aa14.88□□□□□ -0.03
TMEM116-207ENST00000549425 CEP170BQ9Y4F5 1589 aaPredicted RBP14.88□□□□□ -0.03
TMEM116-207ENST00000549425 MROH2AA6NES4 1674 aa14.87□□□□□ -0.03
TMEM116-207ENST00000549425 MYO5CQ9NQX4 1742 aa14.86□□□□□ -0.03
TMEM116-207ENST00000549425 SHANK2Q9UPX8 1470 aa14.85□□□□□ -0.03
TMEM116-207ENST00000549425 POTEAQ6S8J7 498 aa14.85□□□□□ -0.03
TMEM116-207ENST00000549425 AFAP1Q8N556 730 aa14.83□□□□□ -0.04
TMEM116-207ENST00000549425 EFCAB2Q5VUJ9 269 aa14.82□□□□□ -0.04
TMEM116-207ENST00000549425 POLR1AO95602 1720 aaPredicted RBP14.82□□□□□ -0.04
TMEM116-207ENST00000549425 SRCAPQ6ZRS2 3230 aa14.81□□□□□ -0.04
TMEM116-207ENST00000549425 ZMYM3Q14202 1370 aa14.8□□□□□ -0.04
TMEM116-207ENST00000549425 PRXQ9BXM0 1461 aa14.78□□□□□ -0.04
TMEM116-207ENST00000549425 RNF17Q9BXT8 1623 aaKnown RBP14.77□□□□□ -0.04
TMEM116-207ENST00000549425 MLH3Q9UHC1 1453 aa14.77□□□□□ -0.04
TMEM116-207ENST00000549425 CLTCQ00610 1675 aaKnown RBP14.77□□□□□ -0.05
TMEM116-207ENST00000549425 NEURL4Q96JN8 1562 aa14.77□□□□□ -0.05
TMEM116-207ENST00000549425 ARHGAP5Q13017 1502 aa14.76□□□□□ -0.05
TMEM116-207ENST00000549425 VWDEQ8N2E2 1590 aa14.76□□□□□ -0.05
TMEM116-207ENST00000549425 CDK13Q14004 1512 aaKnown RBP14.76□□□□□ -0.05
TMEM116-207ENST00000549425 DNMT1P26358 1616 aaKnown RBP14.74□□□□□ -0.05
TMEM116-207ENST00000549425 A2ML1A8K2U0 1454 aa14.72□□□□□ -0.05
TMEM116-207ENST00000549425 UPF1Q92900 1129 aaKnown RBP eCLIP14.72□□□□□ -0.05
TMEM116-207ENST00000549425 KIDINS220Q9ULH0 1771 aa14.7□□□□□ -0.06
TMEM116-207ENST00000549425 SYNMO15061 1565 aa14.7□□□□□ -0.06
TMEM116-207ENST00000549425 RANGAP1P46060 587 aaPredicted RBP14.7□□□□□ -0.06
TMEM116-207ENST00000549425 KIF14Q15058 1648 aa14.7□□□□□ -0.06
TMEM116-207ENST00000549425 LRRC7Q96NW7 1537 aa14.68□□□□□ -0.06
TMEM116-207ENST00000549425 ITSN2Q9NZM3 1697 aa14.67□□□□□ -0.06
TMEM116-207ENST00000549425 STRCP1A6NGW2 1772 aa14.66□□□□□ -0.06
TMEM116-207ENST00000549425 ABCC1P33527 1531 aa14.66□□□□□ -0.06
TMEM116-207ENST00000549425 NPHP4O75161 1426 aaPredicted RBP14.63□□□□□ -0.07
TMEM116-207ENST00000549425 CDC42BPBQ9Y5S2 1711 aa14.63□□□□□ -0.07
TMEM116-207ENST00000549425 IQGAP1P46940 1657 aa14.62□□□□□ -0.07
TMEM116-207ENST00000549425 ANKLE2Q86XL3 938 aa14.62□□□□□ -0.07
TMEM116-207ENST00000549425 TRIM52Q96A61 297 aa14.6□□□□□ -0.07
TMEM116-207ENST00000549425 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.6□□□□□ -0.07
TMEM116-207ENST00000549425 DEPDC5O75140 1603 aa14.59□□□□□ -0.07
TMEM116-207ENST00000549425 MED14O60244 1454 aa14.59□□□□□ -0.07
TMEM116-207ENST00000549425 GGT6Q6P531 493 aa14.58□□□□□ -0.08
TMEM116-207ENST00000549425 PREX2Q70Z35 1606 aa14.58□□□□□ -0.08
TMEM116-207ENST00000549425 CDK11AQ9UQ88 783 aaPredicted RBP14.57□□□□□ -0.08
TMEM116-207ENST00000549425 TNRQ92752 1358 aa14.57□□□□□ -0.08
TMEM116-207ENST00000549425 PLXNC1O60486 1568 aa14.56□□□□□ -0.08
TMEM116-207ENST00000549425 SAMD9LQ8IVG5 1584 aa14.56□□□□□ -0.08
TMEM116-207ENST00000549425 ATP1B4Q9UN42 357 aaPredicted RBP14.56□□□□□ -0.08
TMEM116-207ENST00000549425 CLIP1P30622 1438 aa14.56□□□□□ -0.08
TMEM116-207ENST00000549425 TROQ12816 1431 aaPredicted RBP14.55□□□□□ -0.08
TMEM116-207ENST00000549425 FAM135BQ49AJ0 1406 aa14.55□□□□□ -0.08
TMEM116-207ENST00000549425 ROBO1Q9Y6N7 1651 aa14.54□□□□□ -0.08
TMEM116-207ENST00000549425 XIRP1Q702N8 1843 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms