RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 SIGLEC1Q9BZZ2 1709 aa18.3■□□□□ 0.52
TRAFD1-206ENST00000549358 CFAP74Q9C0B2 1584 aa18.3■□□□□ 0.52
TRAFD1-206ENST00000549358 EFCAB5A4FU69 1503 aa18.29■□□□□ 0.52
TRAFD1-206ENST00000549358 ZMYM4Q5VZL5 1548 aa18.29■□□□□ 0.52
TRAFD1-206ENST00000549358 ILDR2Q71H61 639 aa18.29■□□□□ 0.52
TRAFD1-206ENST00000549358 DISP3Q9P2K9 1392 aa18.29■□□□□ 0.52
TRAFD1-206ENST00000549358 MAGI2Q86UL8 1455 aa18.28■□□□□ 0.52
TRAFD1-206ENST00000549358 CEBPAP49715 358 aaPredicted RBP18.27■□□□□ 0.52
TRAFD1-206ENST00000549358 HECW1Q76N89 1606 aa18.26■□□□□ 0.51
TRAFD1-206ENST00000549358 TTC37Q6PGP7 1564 aa18.25■□□□□ 0.51
TRAFD1-206ENST00000549358 SCAPERQ9BY12 1400 aa18.25■□□□□ 0.51
TRAFD1-206ENST00000549358 SOCS7O14512 581 aa18.24■□□□□ 0.51
TRAFD1-206ENST00000549358 FER1L4A9Z1Z3 1794 aa18.23■□□□□ 0.51
TRAFD1-206ENST00000549358 DMRT2Q9Y5R5 561 aa18.23■□□□□ 0.51
TRAFD1-206ENST00000549358 ATP10AO60312 1499 aa18.21■□□□□ 0.51
TRAFD1-206ENST00000549358 PLCH2O75038 1416 aa18.21■□□□□ 0.51
TRAFD1-206ENST00000549358 ARHGEF12Q9NZN5 1544 aa18.19■□□□□ 0.5
TRAFD1-206ENST00000549358 C9orf84Q5VXU9 1444 aa18.18■□□□□ 0.5
TRAFD1-206ENST00000549358 PREX1Q8TCU6 1659 aa18.18■□□□□ 0.5
TRAFD1-206ENST00000549358 EFCAB2Q5VUJ9 269 aa18.17■□□□□ 0.5
TRAFD1-206ENST00000549358 ATP1B4Q9UN42 357 aaPredicted RBP18.17■□□□□ 0.5
TRAFD1-206ENST00000549358 CDK13Q14004 1512 aaKnown RBP18.17■□□□□ 0.5
TRAFD1-206ENST00000549358 MYT1LQ9UL68 1186 aa18.14■□□□□ 0.49
TRAFD1-206ENST00000549358 UHRF1BP1Q6BDS2 1440 aa18.14■□□□□ 0.49
TRAFD1-206ENST00000549358 STRCQ7RTU9 1775 aa18.13■□□□□ 0.49
TRAFD1-206ENST00000549358 AFAP1Q8N556 730 aa18.13■□□□□ 0.49
TRAFD1-206ENST00000549358 EEA1Q15075 1411 aa18.09■□□□□ 0.49
TRAFD1-206ENST00000549358 ZNF518AQ6AHZ1 1483 aa18.08■□□□□ 0.49
TRAFD1-206ENST00000549358 CDK11AQ9UQ88 783 aaPredicted RBP18.08■□□□□ 0.48
TRAFD1-206ENST00000549358 ESF1Q9H501 851 aaKnown RBP18.07■□□□□ 0.48
TRAFD1-206ENST00000549358 PTPRTO14522 1441 aa18.06■□□□□ 0.48
TRAFD1-206ENST00000549358 MYO5CQ9NQX4 1742 aa18.06■□□□□ 0.48
TRAFD1-206ENST00000549358 SPATA31D1Q6ZQQ2 1576 aa18.05■□□□□ 0.48
TRAFD1-206ENST00000549358 ARHGAP5Q13017 1502 aa18.04■□□□□ 0.48
TRAFD1-206ENST00000549358 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
TRAFD1-206ENST00000549358 KIF14Q15058 1648 aa18.02■□□□□ 0.48
TRAFD1-206ENST00000549358 KDM5CP41229 1560 aa18.01■□□□□ 0.47
TRAFD1-206ENST00000549358 FMN1Q68DA7 1419 aa18.01■□□□□ 0.47
TRAFD1-206ENST00000549358 LTBP4Q8N2S1 1624 aa18.01■□□□□ 0.47
TRAFD1-206ENST00000549358 DIP2CQ9Y2E4 1556 aa18■□□□□ 0.47
TRAFD1-206ENST00000549358 TRAPPC8Q9Y2L5 1435 aa18■□□□□ 0.47
TRAFD1-206ENST00000549358 UBTFP17480 764 aaKnown RBP18■□□□□ 0.47
TRAFD1-206ENST00000549358 C3P01024 1663 aa17.99■□□□□ 0.47
TRAFD1-206ENST00000549358 TROQ12816 1431 aaPredicted RBP17.98■□□□□ 0.47
TRAFD1-206ENST00000549358 MLH3Q9UHC1 1453 aa17.98■□□□□ 0.47
TRAFD1-206ENST00000549358 SETD1BQ9UPS6 1966 aaKnown RBP17.98■□□□□ 0.47
TRAFD1-206ENST00000549358 REREQ9P2R6 1566 aa17.97■□□□□ 0.47
TRAFD1-206ENST00000549358 CLIP1P30622 1438 aa17.97■□□□□ 0.47
TRAFD1-206ENST00000549358 ABCA6Q8N139 1617 aa17.96■□□□□ 0.47
TRAFD1-206ENST00000549358 NCOA1Q15788 1441 aa17.96■□□□□ 0.47
TRAFD1-206ENST00000549358 IQSEC2Q5JU85 1478 aa17.95■□□□□ 0.46
TRAFD1-206ENST00000549358 AGLP35573 1532 aa17.94■□□□□ 0.46
TRAFD1-206ENST00000549358 ARHGAP35Q9NRY4 1499 aa17.94■□□□□ 0.46
TRAFD1-206ENST00000549358 NCKAP5LQ9HCH0 1330 aa17.93■□□□□ 0.46
TRAFD1-206ENST00000549358 UBAP1LF5GYI3 381 aa17.92■□□□□ 0.46
TRAFD1-206ENST00000549358 CNTLNQ9NXG0 1405 aa17.91■□□□□ 0.46
TRAFD1-206ENST00000549358 ZNF335Q9H4Z2 1342 aaPredicted RBP17.91■□□□□ 0.46
TRAFD1-206ENST00000549358 CAMSAP1Q5T5Y3 1602 aa17.9■□□□□ 0.46
TRAFD1-206ENST00000549358 CDC42BPBQ9Y5S2 1711 aa17.89■□□□□ 0.46
TRAFD1-206ENST00000549358 ABCC1P33527 1531 aa17.88■□□□□ 0.45
TRAFD1-206ENST00000549358 ZMYM3Q14202 1370 aa17.88■□□□□ 0.45
TRAFD1-206ENST00000549358 NPATQ14207 1427 aa17.87■□□□□ 0.45
TRAFD1-206ENST00000549358 ZNF777Q9ULD5 760 aaPredicted RBP17.86■□□□□ 0.45
TRAFD1-206ENST00000549358 KIDINS220Q9ULH0 1771 aa17.85■□□□□ 0.45
TRAFD1-206ENST00000549358 LRRIQ1Q96JM4 1722 aa17.84■□□□□ 0.45
TRAFD1-206ENST00000549358 ITSN2Q9NZM3 1697 aa17.84■□□□□ 0.45
TRAFD1-206ENST00000549358 PREX2Q70Z35 1606 aa17.84■□□□□ 0.45
TRAFD1-206ENST00000549358 PKD2Q13563 968 aa17.83■□□□□ 0.44
TRAFD1-206ENST00000549358 SPAG9O60271 1321 aaKnown RBP17.81■□□□□ 0.44
TRAFD1-206ENST00000549358 HNRNPMP52272 730 aaKnown RBP eCLIP17.81■□□□□ 0.44
TRAFD1-206ENST00000549358 MROH2AA6NES4 1674 aa17.8■□□□□ 0.44
TRAFD1-206ENST00000549358 SAMD9LQ8IVG5 1584 aa17.79■□□□□ 0.44
TRAFD1-206ENST00000549358 SCAF1Q9H7N4 1312 aaKnown RBP17.78■□□□□ 0.44
TRAFD1-206ENST00000549358 GGT6Q6P531 493 aa17.78■□□□□ 0.44
TRAFD1-206ENST00000549358 SUPT6HQ7KZ85 1726 aaKnown RBP17.77■□□□□ 0.44
TRAFD1-206ENST00000549358 PLA2R1Q13018 1463 aa17.76■□□□□ 0.43
TRAFD1-206ENST00000549358 CCDC18Q5T9S5 1454 aa17.76■□□□□ 0.43
TRAFD1-206ENST00000549358 CASKIN1Q8WXD9 1431 aa17.76■□□□□ 0.43
TRAFD1-206ENST00000549358 HSPA1LP34931 641 aa17.76■□□□□ 0.43
TRAFD1-206ENST00000549358 PIP4K2BP78356 416 aa17.76■□□□□ 0.43
TRAFD1-206ENST00000549358 TCOF1Q13428 1488 aaKnown RBP17.75■□□□□ 0.43
TRAFD1-206ENST00000549358 CDC42BPAQ5VT25 1732 aa17.75■□□□□ 0.43
TRAFD1-206ENST00000549358 PTPRKQ15262 1439 aa17.75■□□□□ 0.43
TRAFD1-206ENST00000549358 CLTCQ00610 1675 aaKnown RBP17.75■□□□□ 0.43
TRAFD1-206ENST00000549358 MYO3AQ8NEV4 1616 aa17.75■□□□□ 0.43
TRAFD1-206ENST00000549358 SYCP2Q9BX26 1530 aa17.74■□□□□ 0.43
TRAFD1-206ENST00000549358 CEP170BQ9Y4F5 1589 aaPredicted RBP17.74■□□□□ 0.43
TRAFD1-206ENST00000549358 A2MP01023 1474 aa17.73■□□□□ 0.43
TRAFD1-206ENST00000549358 GPATCH8Q9UKJ3 1502 aaKnown RBP17.72■□□□□ 0.43
TRAFD1-206ENST00000549358 ZNF142P52746 1687 aaPredicted RBP17.71■□□□□ 0.43
TRAFD1-206ENST00000549358 TOM1O60784 492 aa17.71■□□□□ 0.43
TRAFD1-206ENST00000549358 CFDP1Q9UEE9 299 aaPredicted RBP17.71■□□□□ 0.43
TRAFD1-206ENST00000549358 ATP7AQ04656 1500 aa17.71■□□□□ 0.43
TRAFD1-206ENST00000549358 PLXNC1O60486 1568 aa17.68■□□□□ 0.42
TRAFD1-206ENST00000549358 KIAA1107Q9UPP5 1409 aa17.68■□□□□ 0.42
TRAFD1-206ENST00000549358 MED1Q15648 1581 aaPredicted RBP17.67■□□□□ 0.42
TRAFD1-206ENST00000549358 A2ML1A8K2U0 1454 aa17.66■□□□□ 0.42
TRAFD1-206ENST00000549358 INO80Q9ULG1 1556 aaPredicted RBP17.66■□□□□ 0.42
TRAFD1-206ENST00000549358 PLEKHH2Q8IVE3 1493 aa17.65■□□□□ 0.42
TRAFD1-206ENST00000549358 DNMT1P26358 1616 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms