RNA–Protein interactions for RNA: ENST00000549194.1

GNPTAB-204, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 570 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-204ENST00000549194 HOXB1P14653 301 aaPredicted RBP13.42□□□□□ -0.26
GNPTAB-204ENST00000549194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.42□□□□□ -0.26
GNPTAB-204ENST00000549194 HOXB3P14651 431 aaPredicted RBP13.41□□□□□ -0.26
GNPTAB-204ENST00000549194 RTN4Q9NQC3 1192 aaKnown RBP13.4□□□□□ -0.26
GNPTAB-204ENST00000549194 MYT1LQ9UL68 1186 aa13.4□□□□□ -0.26
GNPTAB-204ENST00000549194 ZNF467Q7Z7K2 595 aaPredicted RBP13.38□□□□□ -0.27
GNPTAB-204ENST00000549194 ERBB3P21860 1342 aa13.38□□□□□ -0.27
GNPTAB-204ENST00000549194 ZNF710Q8N1W2 664 aa13.36□□□□□ -0.27
GNPTAB-204ENST00000549194 ILDR1Q86SU0 546 aaPredicted RBP13.35□□□□□ -0.27
GNPTAB-204ENST00000549194 TOP2AP11388 1531 aaKnown RBP13.33□□□□□ -0.28
GNPTAB-204ENST00000549194 DOK7Q18PE1 504 aa13.32□□□□□ -0.28
GNPTAB-204ENST00000549194 PTGER2P43116 358 aa13.29□□□□□ -0.28
GNPTAB-204ENST00000549194 GSE1Q14687 1217 aa13.29□□□□□ -0.28
GNPTAB-204ENST00000549194 PCGF6Q9BYE7 350 aa13.29□□□□□ -0.28
GNPTAB-204ENST00000549194 G3V3G9 751 aa13.28□□□□□ -0.28
GNPTAB-204ENST00000549194 CIZ1Q9ULV3 898 aaPredicted RBP13.28□□□□□ -0.28
GNPTAB-204ENST00000549194 BOLA1Q9Y3E2 137 aa13.26□□□□□ -0.29
GNPTAB-204ENST00000549194 VARS2Q5ST30 1063 aaKnown RBP13.25□□□□□ -0.29
GNPTAB-204ENST00000549194 RIMBP2O15034 1052 aa13.24□□□□□ -0.29
GNPTAB-204ENST00000549194 PSEN1P49768 467 aa13.24□□□□□ -0.29
GNPTAB-204ENST00000549194 DPY19L2Q6NUT2 758 aa13.24□□□□□ -0.29
GNPTAB-204ENST00000549194 PKD2Q13563 968 aa13.23□□□□□ -0.29
GNPTAB-204ENST00000549194 ZNF687Q8N1G0 1237 aa13.22□□□□□ -0.29
GNPTAB-204ENST00000549194 NESP48681 1621 aa13.21□□□□□ -0.29
GNPTAB-204ENST00000549194 CHRM1P11229 460 aaPredicted RBP13.2□□□□□ -0.3
GNPTAB-204ENST00000549194 TRIM41Q8WV44 630 aa13.2□□□□□ -0.3
GNPTAB-204ENST00000549194 LAMC3Q9Y6N6 1575 aa13.2□□□□□ -0.3
GNPTAB-204ENST00000549194 ECM2O94769 699 aaPredicted RBP13.16□□□□□ -0.3
GNPTAB-204ENST00000549194 CCDC88BA6NC98 1476 aa13.16□□□□□ -0.3
GNPTAB-204ENST00000549194 ZSWIM6Q9HCJ5 1215 aa13.15□□□□□ -0.3
GNPTAB-204ENST00000549194 TRIM26Q12899 539 aaPredicted RBP13.14□□□□□ -0.31
GNPTAB-204ENST00000549194 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
GNPTAB-204ENST00000549194 KIF21AQ7Z4S6 1674 aa13.13□□□□□ -0.31
GNPTAB-204ENST00000549194 ERCC6Q03468 1493 aa13.13□□□□□ -0.31
GNPTAB-204ENST00000549194 CADPSQ9ULU8 1353 aa13.13□□□□□ -0.31
GNPTAB-204ENST00000549194 PDAP1Q13442 181 aaKnown RBP13.12□□□□□ -0.31
GNPTAB-204ENST00000549194 LOC105371045A0A1W2PR82 267 aa13.08□□□□□ -0.32
GNPTAB-204ENST00000549194 ZEB1P37275 1124 aaPredicted RBP13.08□□□□□ -0.32
GNPTAB-204ENST00000549194 CABP2Q9NPB3 220 aa13.08□□□□□ -0.32
GNPTAB-204ENST00000549194 CFTRP13569 1480 aa13.08□□□□□ -0.32
GNPTAB-204ENST00000549194 PDS5BQ9NTI5 1447 aa13.07□□□□□ -0.32
GNPTAB-204ENST00000549194 GPR153Q6NV75 609 aa13.04□□□□□ -0.32
GNPTAB-204ENST00000549194 PPARGC1BQ86YN6 1023 aaKnown RBP13.04□□□□□ -0.32
GNPTAB-204ENST00000549194 ANKRD13DQ6ZTN6 518 aa13.03□□□□□ -0.32
GNPTAB-204ENST00000549194 THOC2Q8NI27 1593 aaKnown RBP13.02□□□□□ -0.33
GNPTAB-204ENST00000549194 FANCD2Q9BXW9 1451 aa13.01□□□□□ -0.33
GNPTAB-204ENST00000549194 RGL2O15211 777 aa13□□□□□ -0.33
GNPTAB-204ENST00000549194 PLA2G2EQ9NZK7 142 aa13□□□□□ -0.33
GNPTAB-204ENST00000549194 CEP164Q9UPV0 1460 aa12.99□□□□□ -0.33
GNPTAB-204ENST00000549194 LSM11P83369 360 aaKnown RBP eCLIP12.96□□□□□ -0.33
GNPTAB-204ENST00000549194 MRC2Q9UBG0 1479 aa12.95□□□□□ -0.34
GNPTAB-204ENST00000549194 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
GNPTAB-204ENST00000549194 TAOK2Q9UL54 1235 aa12.94□□□□□ -0.34
GNPTAB-204ENST00000549194 CUX2O14529 1486 aa12.93□□□□□ -0.34
GNPTAB-204ENST00000549194 RNF25Q96BH1 459 aaPredicted RBP12.93□□□□□ -0.34
GNPTAB-204ENST00000549194 TMEM92Q6UXU6 159 aa12.92□□□□□ -0.34
GNPTAB-204ENST00000549194 WDR62O43379 1518 aa12.91□□□□□ -0.34
GNPTAB-204ENST00000549194 ZNF316A6NFI3 1004 aaPredicted RBP12.9□□□□□ -0.34
GNPTAB-204ENST00000549194 MICALL2Q8IY33 904 aa12.89□□□□□ -0.35
GNPTAB-204ENST00000549194 HCSTQ9UBK5 93 aa12.89□□□□□ -0.35
GNPTAB-204ENST00000549194 URB2Q14146 1524 aaKnown RBP12.88□□□□□ -0.35
GNPTAB-204ENST00000549194 VGFO15240 615 aaPredicted RBP12.87□□□□□ -0.35
GNPTAB-204ENST00000549194 ARSIQ5FYB1 569 aa12.87□□□□□ -0.35
GNPTAB-204ENST00000549194 DNMBPQ6XZF7 1577 aa12.83□□□□□ -0.36
GNPTAB-204ENST00000549194 PBX2P40425 430 aa12.83□□□□□ -0.36
GNPTAB-204ENST00000549194 EFCAB3Q8N7B9 438 aa12.81□□□□□ -0.36
GNPTAB-204ENST00000549194 TOPBP1Q92547 1522 aa12.81□□□□□ -0.36
GNPTAB-204ENST00000549194 ABCC8Q09428 1581 aa12.81□□□□□ -0.36
GNPTAB-204ENST00000549194 CHGAP10645 457 aaKnown RBP12.79□□□□□ -0.36
GNPTAB-204ENST00000549194 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.77□□□□□ -0.37
GNPTAB-204ENST00000549194 ZFP91Q96JP5 570 aaPredicted RBP12.77□□□□□ -0.37
GNPTAB-204ENST00000549194 HS6ST3Q8IZP7 471 aa12.76□□□□□ -0.37
GNPTAB-204ENST00000549194 CUX1P39880 1505 aa12.76□□□□□ -0.37
GNPTAB-204ENST00000549194 KHSRPQ92945 711 aaKnown RBP eCLIP12.75□□□□□ -0.37
GNPTAB-204ENST00000549194 STK25O00506 426 aa12.74□□□□□ -0.37
GNPTAB-204ENST00000549194 BIVM-ERCC5R4GMW8 1640 aa12.71□□□□□ -0.37
GNPTAB-204ENST00000549194 BCL11BQ9C0K0 894 aaPredicted RBP12.71□□□□□ -0.37
GNPTAB-204ENST00000549194 IFT140Q96RY7 1462 aa12.71□□□□□ -0.38
GNPTAB-204ENST00000549194 SYNJ1O43426 1573 aa12.7□□□□□ -0.38
GNPTAB-204ENST00000549194 POLA1P09884 1462 aaPredicted RBP12.7□□□□□ -0.38
GNPTAB-204ENST00000549194 FGD5Q6ZNL6 1462 aa12.7□□□□□ -0.38
GNPTAB-204ENST00000549194 TARBP1Q13395 1621 aaKnown RBP12.7□□□□□ -0.38
GNPTAB-204ENST00000549194 SOX12O15370 315 aa12.69□□□□□ -0.38
GNPTAB-204ENST00000549194 POTEEQ6S8J3 1075 aa12.69□□□□□ -0.38
GNPTAB-204ENST00000549194 FAM9AQ8IZU1 332 aaPredicted RBP12.69□□□□□ -0.38
GNPTAB-204ENST00000549194 BBXQ8WY36 941 aaPredicted RBP12.69□□□□□ -0.38
GNPTAB-204ENST00000549194 STK24Q9Y6E0 443 aa12.69□□□□□ -0.38
GNPTAB-204ENST00000549194 TOP2BQ02880 1626 aa12.69□□□□□ -0.38
GNPTAB-204ENST00000549194 WRNQ14191 1432 aaPredicted RBP eCLIP12.68□□□□□ -0.38
GNPTAB-204ENST00000549194 DNAJC5Q9H3Z4 198 aa12.66□□□□□ -0.38
GNPTAB-204ENST00000549194 AXIN2Q9Y2T1 843 aa12.66□□□□□ -0.38
GNPTAB-204ENST00000549194 RAD54L2Q9Y4B4 1467 aa12.65□□□□□ -0.38
GNPTAB-204ENST00000549194 ZNF608Q9ULD9 1512 aaPredicted RBP12.65□□□□□ -0.38
GNPTAB-204ENST00000549194 EIF4G3O43432 1585 aaKnown RBP12.64□□□□□ -0.39
GNPTAB-204ENST00000549194 SOGA1O94964 1423 aa12.64□□□□□ -0.39
GNPTAB-204ENST00000549194 WDR97A6NE52 1622 aa12.64□□□□□ -0.39
GNPTAB-204ENST00000549194 RGS20O76081 388 aa12.64□□□□□ -0.39
GNPTAB-204ENST00000549194 ADGRD1Q6QNK2 874 aa12.64□□□□□ -0.39
GNPTAB-204ENST00000549194 MS4A4AQ96JQ5 239 aa12.64□□□□□ -0.39
GNPTAB-204ENST00000549194 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms